Experiment: L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS19370 and BWI76_RS19375 are separated by 148 nucleotides BWI76_RS19375 and BWI76_RS19380 overlap by 4 nucleotides BWI76_RS19380 and BWI76_RS19385 are separated by 363 nucleotides
BWI76_RS19370: BWI76_RS19370 - fructose-bisphosphate aldolase, at 4,037,528 to 4,038,580
_RS19370
BWI76_RS19375: BWI76_RS19375 - bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase, at 4,038,729 to 4,039,529
_RS19375
BWI76_RS19380: BWI76_RS19380 - hydroxyethylthiazole kinase, at 4,039,526 to 4,040,299
_RS19380
BWI76_RS19385: BWI76_RS19385 - MBL fold hydrolase, at 4,040,663 to 4,042,639
_RS19385
Position (kb)
4039
4040
4041 Strain fitness (log2 ratio)
-2
-1
0
1 at 4038.645 kb on + strand at 4038.645 kb on + strand at 4038.645 kb on + strand at 4038.645 kb on + strand at 4038.653 kb on - strand at 4038.653 kb on - strand at 4038.818 kb on - strand, within BWI76_RS19375 at 4038.976 kb on - strand, within BWI76_RS19375 at 4039.044 kb on + strand, within BWI76_RS19375 at 4039.493 kb on - strand at 4039.865 kb on + strand, within BWI76_RS19380 at 4039.906 kb on - strand, within BWI76_RS19380 at 4040.019 kb on + strand, within BWI76_RS19380 at 4040.225 kb on + strand at 4040.298 kb on - strand at 4040.406 kb on + strand at 4040.496 kb on + strand at 4040.496 kb on + strand at 4040.504 kb on - strand at 4040.504 kb on - strand at 4040.514 kb on - strand at 4040.867 kb on - strand, within BWI76_RS19385
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (N) remove 4,038,645 + +0.9 4,038,645 + +0.1 4,038,645 + +0.5 4,038,645 + +0.1 4,038,653 - -0.1 4,038,653 - -0.9 4,038,818 - BWI76_RS19375 0.11 -2.1 4,038,976 - BWI76_RS19375 0.31 +1.0 4,039,044 + BWI76_RS19375 0.39 -1.1 4,039,493 - +0.2 4,039,865 + BWI76_RS19380 0.44 +0.6 4,039,906 - BWI76_RS19380 0.49 +0.1 4,040,019 + BWI76_RS19380 0.64 -0.5 4,040,225 + -0.0 4,040,298 - +0.4 4,040,406 + -0.5 4,040,496 + +0.2 4,040,496 + +0.8 4,040,504 - +1.7 4,040,504 - +0.3 4,040,514 - +0.1 4,040,867 - BWI76_RS19385 0.10 +0.0
Or see this region's nucleotide sequence