Experiment: L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS16615 and BWI76_RS16620 are separated by 198 nucleotides BWI76_RS16620 and BWI76_RS16625 are separated by 373 nucleotides BWI76_RS16625 and BWI76_RS16630 are separated by 18 nucleotides BWI76_RS16630 and BWI76_RS16635 are separated by 88 nucleotides
BWI76_RS16615: BWI76_RS16615 - FAD/NAD(P) binding domain-containing protein, at 3,439,840 to 3,441,450
_RS16615
BWI76_RS16620: BWI76_RS16620 - TIGR00156 family protein, at 3,441,649 to 3,442,041
_RS16620
BWI76_RS16625: BWI76_RS16625 - putative oxidoreductase, at 3,442,415 to 3,443,299
_RS16625
BWI76_RS16630: BWI76_RS16630 - MBL fold metallo-hydrolase, at 3,443,318 to 3,444,124
_RS16630
BWI76_RS16635: BWI76_RS16635 - carbonate dehydratase, at 3,444,213 to 3,444,848
_RS16635
Position (kb)
3442
3443
3444 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3441.590 kb on - strand at 3441.633 kb on + strand at 3441.721 kb on + strand, within BWI76_RS16620 at 3441.731 kb on + strand, within BWI76_RS16620 at 3441.764 kb on + strand, within BWI76_RS16620 at 3441.772 kb on - strand, within BWI76_RS16620 at 3441.774 kb on + strand, within BWI76_RS16620 at 3441.781 kb on + strand, within BWI76_RS16620 at 3441.782 kb on - strand, within BWI76_RS16620 at 3441.801 kb on + strand, within BWI76_RS16620 at 3441.833 kb on + strand, within BWI76_RS16620 at 3441.865 kb on + strand, within BWI76_RS16620 at 3441.888 kb on + strand, within BWI76_RS16620 at 3441.890 kb on + strand, within BWI76_RS16620 at 3441.890 kb on + strand, within BWI76_RS16620 at 3441.890 kb on + strand, within BWI76_RS16620 at 3441.890 kb on + strand, within BWI76_RS16620 at 3441.890 kb on + strand, within BWI76_RS16620 at 3441.890 kb on + strand, within BWI76_RS16620 at 3441.890 kb on + strand, within BWI76_RS16620 at 3441.890 kb on + strand, within BWI76_RS16620 at 3441.890 kb on + strand, within BWI76_RS16620 at 3441.890 kb on + strand, within BWI76_RS16620 at 3441.890 kb on + strand, within BWI76_RS16620 at 3441.896 kb on - strand, within BWI76_RS16620 at 3441.898 kb on - strand, within BWI76_RS16620 at 3441.898 kb on - strand, within BWI76_RS16620 at 3441.898 kb on - strand, within BWI76_RS16620 at 3441.898 kb on - strand, within BWI76_RS16620 at 3441.973 kb on + strand, within BWI76_RS16620 at 3441.978 kb on + strand at 3442.049 kb on + strand at 3442.052 kb on - strand at 3442.052 kb on - strand at 3442.057 kb on - strand at 3442.058 kb on + strand at 3442.066 kb on - strand at 3442.215 kb on - strand at 3442.262 kb on - strand at 3442.385 kb on + strand at 3442.385 kb on + strand at 3442.408 kb on + strand at 3442.416 kb on - strand at 3442.416 kb on - strand at 3442.457 kb on - strand at 3442.526 kb on + strand, within BWI76_RS16625 at 3442.526 kb on + strand, within BWI76_RS16625 at 3442.592 kb on + strand, within BWI76_RS16625 at 3442.729 kb on + strand, within BWI76_RS16625 at 3442.776 kb on - strand, within BWI76_RS16625 at 3443.007 kb on + strand, within BWI76_RS16625 at 3443.062 kb on + strand, within BWI76_RS16625 at 3443.215 kb on + strand at 3443.399 kb on + strand, within BWI76_RS16630 at 3443.415 kb on + strand, within BWI76_RS16630 at 3443.588 kb on + strand, within BWI76_RS16630 at 3443.596 kb on - strand, within BWI76_RS16630 at 3443.596 kb on - strand, within BWI76_RS16630 at 3443.672 kb on - strand, within BWI76_RS16630 at 3443.779 kb on - strand, within BWI76_RS16630 at 3443.952 kb on + strand, within BWI76_RS16630 at 3444.163 kb on - strand at 3444.163 kb on - strand at 3444.163 kb on - strand at 3444.184 kb on + strand at 3444.202 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (N) remove 3,441,590 - +0.7 3,441,633 + +0.6 3,441,721 + BWI76_RS16620 0.18 -0.7 3,441,731 + BWI76_RS16620 0.21 -0.4 3,441,764 + BWI76_RS16620 0.29 -0.4 3,441,772 - BWI76_RS16620 0.31 +0.4 3,441,774 + BWI76_RS16620 0.32 +0.8 3,441,781 + BWI76_RS16620 0.34 +1.1 3,441,782 - BWI76_RS16620 0.34 +0.1 3,441,801 + BWI76_RS16620 0.39 -0.2 3,441,833 + BWI76_RS16620 0.47 +0.0 3,441,865 + BWI76_RS16620 0.55 -0.5 3,441,888 + BWI76_RS16620 0.61 -0.4 3,441,890 + BWI76_RS16620 0.61 -1.7 3,441,890 + BWI76_RS16620 0.61 +0.2 3,441,890 + BWI76_RS16620 0.61 +0.6 3,441,890 + BWI76_RS16620 0.61 +0.3 3,441,890 + BWI76_RS16620 0.61 -0.9 3,441,890 + BWI76_RS16620 0.61 +0.1 3,441,890 + BWI76_RS16620 0.61 -1.0 3,441,890 + BWI76_RS16620 0.61 +1.4 3,441,890 + BWI76_RS16620 0.61 -0.0 3,441,890 + BWI76_RS16620 0.61 -1.9 3,441,890 + BWI76_RS16620 0.61 -0.3 3,441,896 - BWI76_RS16620 0.63 -0.2 3,441,898 - BWI76_RS16620 0.63 -1.9 3,441,898 - BWI76_RS16620 0.63 -0.2 3,441,898 - BWI76_RS16620 0.63 +0.0 3,441,898 - BWI76_RS16620 0.63 +2.4 3,441,973 + BWI76_RS16620 0.82 -0.6 3,441,978 + -0.2 3,442,049 + +0.4 3,442,052 - -0.2 3,442,052 - +1.3 3,442,057 - -0.7 3,442,058 + -0.2 3,442,066 - -0.2 3,442,215 - +0.4 3,442,262 - -1.2 3,442,385 + +1.2 3,442,385 + -0.9 3,442,408 + +0.2 3,442,416 - -0.3 3,442,416 - +0.8 3,442,457 - -2.3 3,442,526 + BWI76_RS16625 0.13 -1.0 3,442,526 + BWI76_RS16625 0.13 -0.9 3,442,592 + BWI76_RS16625 0.20 -1.4 3,442,729 + BWI76_RS16625 0.35 -1.6 3,442,776 - BWI76_RS16625 0.41 -0.4 3,443,007 + BWI76_RS16625 0.67 -0.9 3,443,062 + BWI76_RS16625 0.73 -0.2 3,443,215 + +1.3 3,443,399 + BWI76_RS16630 0.10 +0.1 3,443,415 + BWI76_RS16630 0.12 -0.4 3,443,588 + BWI76_RS16630 0.33 -0.4 3,443,596 - BWI76_RS16630 0.34 -0.0 3,443,596 - BWI76_RS16630 0.34 +0.2 3,443,672 - BWI76_RS16630 0.44 +0.3 3,443,779 - BWI76_RS16630 0.57 +0.1 3,443,952 + BWI76_RS16630 0.79 +0.4 3,444,163 - -0.1 3,444,163 - +0.3 3,444,163 - +0.1 3,444,184 + +0.1 3,444,202 - -0.5
Or see this region's nucleotide sequence