Experiment: 3 day starvation, 37C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0237 and DvMF_0238 are separated by 342 nucleotides DvMF_0238 and DvMF_0239 are separated by 221 nucleotides DvMF_0239 and DvMF_0240 are separated by 245 nucleotides DvMF_0240 and DvMF_0241 are separated by 87 nucleotides
DvMF_0237: DvMF_0237 - putative CheA signal transduction histidine kinase (RefSeq), at 266,347 to 268,356
_0237
DvMF_0238: DvMF_0238 - hypothetical protein (RefSeq), at 268,699 to 268,971
_0238
DvMF_0239: DvMF_0239 - Beta tubulin, autoregulation binding site (RefSeq), at 269,193 to 271,886
_0239
DvMF_0240: DvMF_0240 - hypothetical protein (RefSeq), at 272,132 to 272,500
_0240
DvMF_0241: DvMF_0241 - major facilitator superfamily MFS_1 (RefSeq), at 272,588 to 273,805
_0241
Position (kb) 269
270
271
272 Strain fitness (log2 ratio) -1
0
1 at 268.439 kb on + strand at 268.447 kb on - strand at 268.457 kb on - strand at 268.459 kb on - strand at 268.479 kb on + strand at 268.503 kb on - strand at 268.532 kb on - strand at 268.624 kb on + strand at 268.658 kb on - strand at 268.904 kb on - strand, within DvMF_0238 at 269.303 kb on + strand at 269.308 kb on + strand at 269.356 kb on - strand at 269.364 kb on - strand at 269.495 kb on + strand, within DvMF_0239 at 269.503 kb on - strand, within DvMF_0239 at 269.674 kb on + strand, within DvMF_0239 at 269.777 kb on + strand, within DvMF_0239 at 269.824 kb on + strand, within DvMF_0239 at 270.355 kb on - strand, within DvMF_0239 at 270.497 kb on + strand, within DvMF_0239 at 270.513 kb on + strand, within DvMF_0239 at 270.661 kb on - strand, within DvMF_0239 at 271.018 kb on + strand, within DvMF_0239 at 271.058 kb on - strand, within DvMF_0239 at 271.058 kb on - strand, within DvMF_0239 at 271.058 kb on - strand, within DvMF_0239 at 271.069 kb on + strand, within DvMF_0239 at 271.130 kb on + strand, within DvMF_0239 at 271.134 kb on + strand, within DvMF_0239 at 271.195 kb on - strand, within DvMF_0239 at 271.198 kb on + strand, within DvMF_0239 at 271.261 kb on - strand, within DvMF_0239 at 271.374 kb on + strand, within DvMF_0239 at 271.489 kb on + strand, within DvMF_0239 at 271.586 kb on - strand, within DvMF_0239 at 271.683 kb on + strand at 271.725 kb on + strand at 271.796 kb on + strand at 271.796 kb on + strand at 271.796 kb on + strand at 271.804 kb on - strand at 271.804 kb on - strand at 271.804 kb on - strand at 271.804 kb on - strand at 271.855 kb on + strand at 271.863 kb on - strand at 271.869 kb on + strand at 271.869 kb on + strand at 272.028 kb on - strand at 272.182 kb on - strand, within DvMF_0240 at 272.396 kb on + strand, within DvMF_0240 at 272.396 kb on + strand, within DvMF_0240 at 272.636 kb on - strand at 272.656 kb on + strand at 272.800 kb on - strand, within DvMF_0241
Per-strain Table
Position Strand Gene LocusTag Fraction 3 day starvation, 37C remove 268,439 + +0.5 268,447 - +0.5 268,457 - -0.3 268,459 - +0.6 268,479 + +0.5 268,503 - +0.5 268,532 - +0.9 268,624 + +0.4 268,658 - +0.2 268,904 - DvMF_0238 0.75 +0.2 269,303 + -1.6 269,308 + +0.5 269,356 - +0.2 269,364 - +0.4 269,495 + DvMF_0239 0.11 -0.8 269,503 - DvMF_0239 0.12 +0.1 269,674 + DvMF_0239 0.18 -0.1 269,777 + DvMF_0239 0.22 +0.9 269,824 + DvMF_0239 0.23 +0.9 270,355 - DvMF_0239 0.43 +0.4 270,497 + DvMF_0239 0.48 -0.1 270,513 + DvMF_0239 0.49 -0.6 270,661 - DvMF_0239 0.54 -0.1 271,018 + DvMF_0239 0.68 +0.6 271,058 - DvMF_0239 0.69 +0.2 271,058 - DvMF_0239 0.69 -0.7 271,058 - DvMF_0239 0.69 +0.4 271,069 + DvMF_0239 0.70 +0.2 271,130 + DvMF_0239 0.72 +0.4 271,134 + DvMF_0239 0.72 +0.2 271,195 - DvMF_0239 0.74 +0.8 271,198 + DvMF_0239 0.74 -0.1 271,261 - DvMF_0239 0.77 +0.0 271,374 + DvMF_0239 0.81 +0.0 271,489 + DvMF_0239 0.85 +0.0 271,586 - DvMF_0239 0.89 +0.4 271,683 + +1.0 271,725 + +1.0 271,796 + +0.1 271,796 + +0.5 271,796 + +0.2 271,804 - +0.0 271,804 - -0.1 271,804 - +0.0 271,804 - -0.1 271,855 + -1.4 271,863 - +0.3 271,869 + +0.2 271,869 + +0.2 272,028 - +0.6 272,182 - DvMF_0240 0.14 -0.9 272,396 + DvMF_0240 0.72 +0.7 272,396 + DvMF_0240 0.72 +1.1 272,636 - +0.5 272,656 + +0.4 272,800 - DvMF_0241 0.17 -0.3
Or see this region's nucleotide sequence