Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5780

Experiment: Gjerstad humics 0.5 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gjerstad humics 0.5 M
6,597,415	+		Pf6N2E2_5779	0.61	-2.3
6,597,415	+		Pf6N2E2_5779	0.61	-0.3
6,597,595	+		Pf6N2E2_5779	0.71	+0.7
6,597,595	+		Pf6N2E2_5779	0.71	-0.7
6,597,634	+		Pf6N2E2_5779	0.73	-0.1
6,597,912	+		Pf6N2E2_5779	0.89	-0.9
6,597,913	-		Pf6N2E2_5779	0.89	-1.8
6,597,913	-		Pf6N2E2_5779	0.89	+0.4
6,597,913	-		Pf6N2E2_5779	0.89	+1.1
6,597,913	-		Pf6N2E2_5779	0.89	-1.1
6,597,913	-		Pf6N2E2_5779	0.89	+0.5
6,597,951	+				-0.3
6,597,952	-				-1.9
6,598,007	-				+1.0
6,598,166	+				-0.2
6,598,167	-				-1.7
6,598,167	-				-0.7
6,598,268	+				-1.6
6,598,302	-				-1.1
6,598,856	+		Pf6N2E2_5780	0.29	-1.5
6,598,856	+		Pf6N2E2_5780	0.29	-0.3
6,598,934	+		Pf6N2E2_5780	0.33	-1.9
6,598,934	+		Pf6N2E2_5780	0.33	-3.2
6,598,934	+		Pf6N2E2_5780	0.33	+0.4
6,598,935	-		Pf6N2E2_5780	0.33	-0.1
6,598,935	-		Pf6N2E2_5780	0.33	+0.5
6,598,935	-		Pf6N2E2_5780	0.33	-0.6
6,599,150	+		Pf6N2E2_5780	0.43	-2.6
6,599,189	+		Pf6N2E2_5780	0.45	-1.3
6,599,190	-		Pf6N2E2_5780	0.45	-2.6
6,599,190	-		Pf6N2E2_5780	0.45	-1.6
6,599,190	-		Pf6N2E2_5780	0.45	-1.0
6,599,190	-		Pf6N2E2_5780	0.45	-2.2
6,599,190	-		Pf6N2E2_5780	0.45	-0.7
6,599,222	+		Pf6N2E2_5780	0.47	-0.1
6,599,222	+		Pf6N2E2_5780	0.47	+0.3
6,599,223	-		Pf6N2E2_5780	0.47	-2.4
6,599,223	-		Pf6N2E2_5780	0.47	-0.8
6,599,624	+		Pf6N2E2_5780	0.66	-1.2
6,599,625	-		Pf6N2E2_5780	0.66	-1.6
6,599,642	+		Pf6N2E2_5780	0.67	-0.7
6,599,666	+		Pf6N2E2_5780	0.68	-1.6
6,599,666	+		Pf6N2E2_5780	0.68	-2.0
6,599,666	+		Pf6N2E2_5780	0.68	-0.5
6,599,666	+		Pf6N2E2_5780	0.68	-0.9
6,599,667	-		Pf6N2E2_5780	0.68	-1.1
6,599,883	+		Pf6N2E2_5780	0.78	-0.2
6,599,931	-		Pf6N2E2_5780	0.80	-0.2
6,599,969	+		Pf6N2E2_5780	0.82	+0.8
6,599,969	+		Pf6N2E2_5780	0.82	-0.7
6,599,969	+		Pf6N2E2_5780	0.82	+0.5
6,599,970	-		Pf6N2E2_5780	0.82	-0.5
6,599,970	-		Pf6N2E2_5780	0.82	-2.0
6,600,065	+		Pf6N2E2_5780	0.87	-0.4
6,600,095	+		Pf6N2E2_5780	0.88	-1.8
6,600,095	+		Pf6N2E2_5780	0.88	-1.3
6,600,096	-		Pf6N2E2_5780	0.88	-0.7
6,600,096	-		Pf6N2E2_5780	0.88	-0.5
6,600,104	+		Pf6N2E2_5780	0.89	-1.3
6,600,146	+				+0.5
6,600,146	+				-0.9
6,600,146	+				-0.8
6,600,146	+				-0.6
6,600,146	+				-0.3
6,600,147	-				-0.5
6,600,278	-				-0.9
6,600,345	+				-0.3
6,600,346	-				+0.8
6,600,346	-				-1.0
6,600,346	-				-0.3
6,600,346	-				-0.6
6,600,348	+				-0.5
6,600,348	+				-0.3
6,600,349	-				+0.2
6,600,349	-				+0.4
6,600,349	-				+0.1
6,600,392	-				-1.3
6,600,392	-				+0.3
6,600,440	+				-0.6
6,600,532	+				+0.0
6,600,532	+				+0.8
6,600,533	-				-0.3
6,600,750	+		Pf6N2E2_5781	0.31	+0.0
6,600,750	+		Pf6N2E2_5781	0.31	+0.9
6,600,750	+		Pf6N2E2_5781	0.31	+0.4
6,600,750	+		Pf6N2E2_5781	0.31	+0.0
6,600,750	+		Pf6N2E2_5781	0.31	+0.3
6,600,750	+		Pf6N2E2_5781	0.31	-1.3
6,600,750	+		Pf6N2E2_5781	0.31	-0.8
6,600,750	+		Pf6N2E2_5781	0.31	+0.7
6,600,751	-		Pf6N2E2_5781	0.31	-0.9
6,600,751	-		Pf6N2E2_5781	0.31	-0.7
6,600,751	-		Pf6N2E2_5781	0.31	+0.7
6,600,751	-		Pf6N2E2_5781	0.31	-0.1
6,600,751	-		Pf6N2E2_5781	0.31	-1.6
6,600,806	+		Pf6N2E2_5781	0.37	+1.1
6,600,864	+		Pf6N2E2_5781	0.43	+0.7
6,600,971	+		Pf6N2E2_5781	0.54	+0.4
6,600,971	+		Pf6N2E2_5781	0.54	+0.1
6,601,005	+		Pf6N2E2_5781	0.57	-0.9
6,601,005	+		Pf6N2E2_5781	0.57	+1.1
6,601,080	-		Pf6N2E2_5781	0.65	+0.5
6,601,189	+		Pf6N2E2_5781	0.77	-0.5