Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4982

Experiment: Gjerstad humics 0.5 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gjerstad humics 0.5 M
5,748,538	+		Pf6N2E2_4981	0.77	-0.6
5,748,538	+		Pf6N2E2_4981	0.77	+0.9
5,748,538	+		Pf6N2E2_4981	0.77	-1.1
5,748,538	+		Pf6N2E2_4981	0.77	-0.5
5,748,538	+		Pf6N2E2_4981	0.77	-1.0
5,748,539	-		Pf6N2E2_4981	0.77	-0.7
5,748,539	-		Pf6N2E2_4981	0.77	-0.4
5,748,539	-		Pf6N2E2_4981	0.77	-0.9
5,748,539	-		Pf6N2E2_4981	0.77	-0.9
5,748,539	-		Pf6N2E2_4981	0.77	+0.6
5,748,717	+		Pf6N2E2_4981	0.86	+0.3
5,748,717	+		Pf6N2E2_4981	0.86	+0.6
5,748,717	+		Pf6N2E2_4981	0.86	+0.6
5,748,717	+		Pf6N2E2_4981	0.86	-0.4
5,748,718	-		Pf6N2E2_4981	0.86	+0.4
5,748,930	+				+0.4
5,748,978	+				+1.2
5,748,978	+				-0.7
5,748,978	+				+0.1
5,748,979	-				-0.3
5,748,979	-				+0.5
5,748,979	-				+0.1
5,749,147	+				-0.3
5,749,147	+				+0.6
5,749,147	+				-0.7
5,749,147	+				-0.3
5,749,147	+				-1.0
5,749,148	-				+0.2
5,749,148	-				-0.4
5,749,148	-				+0.4
5,749,148	-				+0.2
5,749,249	+				+1.0
5,749,249	+				+0.2
5,749,250	-				+0.4
5,749,250	-				-0.4
5,749,250	-				-1.5
5,749,250	-				-0.7
5,749,250	-				-0.1
5,749,250	-				-0.5
5,749,250	-				+0.3
5,749,250	-				-0.4
5,749,268	+				-0.4
5,749,268	+				+0.6
5,749,268	+				-1.2
5,749,268	+				-0.1
5,749,268	+				-1.9
5,749,269	-				-0.2
5,749,269	-				-1.3
5,749,269	-				+0.1
5,749,269	-				-1.0
5,749,269	-				-0.6
5,749,269	-				+1.0
5,749,269	-				+0.4
5,749,303	+				+0.3
5,749,325	+				-1.8
5,749,349	+				-1.9
5,749,349	+				-2.1
5,749,349	+				-1.2
5,749,575	+		Pf6N2E2_4982	0.18	-2.1
5,749,575	+		Pf6N2E2_4982	0.18	-1.0
5,749,575	+		Pf6N2E2_4982	0.18	-1.7
5,749,599	+		Pf6N2E2_4982	0.19	-1.3
5,749,599	+		Pf6N2E2_4982	0.19	-1.5
5,750,174	+		Pf6N2E2_4982	0.62	-0.5
5,750,312	+		Pf6N2E2_4982	0.72	-1.2
5,750,312	+		Pf6N2E2_4982	0.72	+0.1
5,750,312	+		Pf6N2E2_4982	0.72	+0.8
5,750,312	+		Pf6N2E2_4982	0.72	+0.1
5,750,312	+		Pf6N2E2_4982	0.72	-1.0
5,750,312	+		Pf6N2E2_4982	0.72	-0.0
5,750,316	+		Pf6N2E2_4982	0.72	-2.0
5,750,316	+		Pf6N2E2_4982	0.72	+1.2
5,750,316	+		Pf6N2E2_4982	0.72	+0.0
5,750,579	+				+0.6
5,751,329	+				+0.3
5,751,329	+				+0.1
5,751,330	-				-1.1
5,751,330	-				-0.4
5,751,330	-				-0.7
5,751,330	-				+0.2
5,751,420	+		Pf6N2E2_4984	0.34	+0.3
5,751,445	-		Pf6N2E2_4984	0.42	+0.5
5,751,445	-		Pf6N2E2_4984	0.42	+0.2
5,751,445	-		Pf6N2E2_4984	0.42	-0.6
5,751,606	+				+1.0
5,751,634	+				+0.0
5,751,634	+				-1.5
5,751,634	+				-0.3
5,751,634	+				-2.0
5,751,635	-				-0.2
5,751,635	-				+0.6
5,751,635	-				+0.0
5,751,635	-				+0.5