Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2197

Experiment: Gjerstad humics 0.5 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gjerstad humics 0.5 M
2,602,936	-				-0.6
2,602,943	+				+0.7
2,602,944	-				+0.1
2,602,944	-				-0.3
2,602,961	+				-2.1
2,602,962	-				-1.1
2,602,962	-				-0.1
2,603,086	+				-0.5
2,603,086	+				+1.3
2,603,087	-				-1.3
2,603,175	-		Pf6N2E2_2196	0.27	-1.6
2,603,175	-		Pf6N2E2_2196	0.27	+0.3
2,603,175	-		Pf6N2E2_2196	0.27	-0.6
2,603,177	+		Pf6N2E2_2196	0.28	-0.6
2,603,177	+		Pf6N2E2_2196	0.28	-0.8
2,603,177	+		Pf6N2E2_2196	0.28	+0.4
2,603,178	-		Pf6N2E2_2196	0.28	-0.5
2,603,178	-		Pf6N2E2_2196	0.28	-1.9
2,603,517	-				-0.2
2,603,550	+				-1.0
2,603,565	+				+0.3
2,603,565	+				-0.9
2,603,565	+				+1.3
2,603,565	+				-0.2
2,603,565	+				+0.7
2,603,565	+				+0.3
2,603,566	-				-1.1
2,603,583	+				+1.0
2,603,583	+				+0.3
2,603,583	+				-0.7
2,603,583	+				-1.5
2,603,657	-				-0.0
2,603,713	+				-2.3
2,603,724	+				-2.1
2,603,764	+				+0.5
2,603,765	-				+0.9
2,603,803	+				-0.0
2,603,804	-				+0.2
2,603,804	-				+0.5
2,603,841	+				+0.0
2,603,842	-				-0.8
2,603,842	-				+0.2
2,603,842	-				+0.1
2,603,850	+				-1.3
2,603,850	+				+0.0
2,603,851	-				+0.0
2,603,851	-				+0.8
2,603,881	+				-0.5
2,603,881	+				+0.3
2,603,881	+				-1.1
2,603,881	+				+0.3
2,603,882	-				-0.5
2,603,882	-				+0.1
2,603,882	-				+0.3
2,603,886	+				-0.6
2,603,886	+				-0.0
2,603,887	-				+0.0
2,603,927	+				+0.7
2,603,943	-				-1.4
2,604,090	+		Pf6N2E2_2197	0.15	-0.2
2,604,090	+		Pf6N2E2_2197	0.15	-0.6
2,604,090	+		Pf6N2E2_2197	0.15	-0.4
2,604,090	+		Pf6N2E2_2197	0.15	+0.6
2,604,127	-		Pf6N2E2_2197	0.18	-1.3
2,604,165	+		Pf6N2E2_2197	0.21	-1.9
2,604,166	-		Pf6N2E2_2197	0.21	-0.1
2,604,261	+		Pf6N2E2_2197	0.30	-0.3
2,604,273	+		Pf6N2E2_2197	0.31	-0.2
2,604,274	-		Pf6N2E2_2197	0.31	+0.9
2,604,274	-		Pf6N2E2_2197	0.31	-1.0
2,604,541	-		Pf6N2E2_2197	0.54	-0.3
2,604,541	-		Pf6N2E2_2197	0.54	-3.0
2,604,918	+		Pf6N2E2_2197	0.87	+0.0
2,604,918	+		Pf6N2E2_2197	0.87	-0.7
2,604,918	+		Pf6N2E2_2197	0.87	-0.7
2,604,918	+		Pf6N2E2_2197	0.87	-0.4
2,604,918	+		Pf6N2E2_2197	0.87	-0.8
2,604,918	+		Pf6N2E2_2197	0.87	-0.8
2,604,918	+		Pf6N2E2_2197	0.87	-0.8
2,604,919	-		Pf6N2E2_2197	0.87	+0.1
2,604,919	-		Pf6N2E2_2197	0.87	-0.4
2,604,919	-		Pf6N2E2_2197	0.87	-1.5
2,604,919	-		Pf6N2E2_2197	0.87	+1.9
2,604,919	-		Pf6N2E2_2197	0.87	-0.2
2,605,145	+				-0.5
2,605,146	-				+0.8
2,605,146	-				-0.7
2,605,146	-				-0.0
2,605,146	-				+0.4
2,605,146	-				+0.6
2,605,146	-				-0.6
2,605,229	-		Pf6N2E2_2198	0.19	+0.2
2,605,229	-		Pf6N2E2_2198	0.19	+0.8
2,605,229	-		Pf6N2E2_2198	0.19	+0.0
2,605,229	-		Pf6N2E2_2198	0.19	+0.5
2,605,384	+		Pf6N2E2_2198	0.48	-0.2
2,605,384	+		Pf6N2E2_2198	0.48	+0.4
2,605,385	-		Pf6N2E2_2198	0.48	-0.0
2,605,464	-		Pf6N2E2_2198	0.63	+0.2
2,605,464	-		Pf6N2E2_2198	0.63	-0.0
2,605,706	-				-0.5
2,605,716	+				-0.4
2,605,716	+				+0.3
2,605,717	-				-1.2
2,605,717	-				-0.7
2,605,717	-				+1.5
2,605,717	-				+0.2
2,605,800	+		Pf6N2E2_2199	0.13	+0.4
2,605,800	+		Pf6N2E2_2199	0.13	-0.4
2,605,800	+		Pf6N2E2_2199	0.13	-1.6
2,605,800	+		Pf6N2E2_2199	0.13	+1.3
2,605,800	+		Pf6N2E2_2199	0.13	-0.2
2,605,800	+		Pf6N2E2_2199	0.13	-1.4
2,605,801	-		Pf6N2E2_2199	0.13	+0.2
2,605,801	-		Pf6N2E2_2199	0.13	-0.5
2,605,801	-		Pf6N2E2_2199	0.13	+1.0
2,605,801	-		Pf6N2E2_2199	0.13	-0.0
2,605,801	-		Pf6N2E2_2199	0.13	-0.2
2,605,801	-		Pf6N2E2_2199	0.13	-0.7
2,605,871	+		Pf6N2E2_2199	0.20	-1.3
2,605,871	+		Pf6N2E2_2199	0.20	+0.1
2,605,871	+		Pf6N2E2_2199	0.20	+1.2
2,605,872	-		Pf6N2E2_2199	0.20	-0.3