Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1467

Experiment: Gjerstad humics 0.5 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gjerstad humics 0.5 M
1,713,915	-		Pf6N2E2_1465	0.78	-3.0
1,713,976	+		Pf6N2E2_1465	0.83	+0.0
1,713,976	+		Pf6N2E2_1465	0.83	-1.4
1,713,976	+		Pf6N2E2_1465	0.83	-0.8
1,713,976	+		Pf6N2E2_1465	0.83	+1.2
1,714,000	-		Pf6N2E2_1465	0.85	-0.7
1,714,000	-		Pf6N2E2_1465	0.85	+0.1
1,714,074	+				+0.5
1,714,074	+				-0.6
1,714,074	+				+1.1
1,714,075	-				+0.1
1,714,075	-				-0.5
1,714,075	-				-0.6
1,714,075	-				-0.1
1,714,079	+				-2.0
1,714,079	+				-1.0
1,714,079	+				-0.6
1,714,080	-				+0.7
1,714,080	-				-0.3
1,714,080	-				+0.4
1,714,080	-				-0.9
1,714,094	+				+0.3
1,714,094	+				+0.3
1,714,094	+				+1.0
1,714,095	-				-0.3
1,714,448	-				+1.0
1,714,448	-				-2.0
1,714,459	+				+0.0
1,714,459	+				+0.6
1,714,459	+				-1.6
1,714,460	-				+0.0
1,714,460	-				+1.5
1,714,487	-				+0.0
1,714,611	-				+0.1
1,714,624	+				-0.6
1,714,624	+				-1.8
1,714,635	-				+0.2
1,714,785	+		Pf6N2E2_1466	0.77	+0.5
1,714,785	+		Pf6N2E2_1466	0.77	+0.6
1,714,785	+		Pf6N2E2_1466	0.77	+0.5
1,714,785	+		Pf6N2E2_1466	0.77	+0.6
1,714,785	+		Pf6N2E2_1466	0.77	+0.2
1,714,785	+		Pf6N2E2_1466	0.77	+1.1
1,714,786	-		Pf6N2E2_1466	0.77	+0.2
1,714,786	-		Pf6N2E2_1466	0.77	-0.6
1,714,786	-		Pf6N2E2_1466	0.77	-0.5
1,714,786	-		Pf6N2E2_1466	0.77	-0.7
1,714,786	-		Pf6N2E2_1466	0.77	+0.8
1,714,786	-		Pf6N2E2_1466	0.77	+0.0
1,714,786	-		Pf6N2E2_1466	0.77	+0.2
1,714,809	-		Pf6N2E2_1466	0.89	+0.2
1,714,809	-		Pf6N2E2_1466	0.89	+2.7
1,714,809	-		Pf6N2E2_1466	0.89	-0.3
1,714,834	+				-1.0
1,714,987	+				-0.9
1,714,987	+				+1.0
1,714,987	+				-0.3
1,714,987	+				-0.6
1,714,988	-				+1.0
1,714,988	-				+0.9
1,715,068	+				+0.0
1,715,069	-				+0.5
1,715,257	+		Pf6N2E2_1467	0.14	-1.0
1,715,258	-		Pf6N2E2_1467	0.14	-1.8
1,715,258	-		Pf6N2E2_1467	0.14	-0.7
1,715,361	+		Pf6N2E2_1467	0.18	+0.4
1,715,361	+		Pf6N2E2_1467	0.18	+0.6
1,715,518	+		Pf6N2E2_1467	0.23	+0.6
1,715,518	+		Pf6N2E2_1467	0.23	-1.8
1,715,519	-		Pf6N2E2_1467	0.23	-0.3
1,716,112	+		Pf6N2E2_1467	0.44	+1.4
1,716,112	+		Pf6N2E2_1467	0.44	-0.8
1,716,113	-		Pf6N2E2_1467	0.44	-0.4
1,716,113	-		Pf6N2E2_1467	0.44	-1.0
1,716,113	-		Pf6N2E2_1467	0.44	-0.3
1,716,115	+		Pf6N2E2_1467	0.44	+0.1
1,716,115	+		Pf6N2E2_1467	0.44	+0.2
1,716,116	-		Pf6N2E2_1467	0.44	-0.2
1,716,116	-		Pf6N2E2_1467	0.44	-1.3
1,716,116	-		Pf6N2E2_1467	0.44	-1.3
1,716,116	-		Pf6N2E2_1467	0.44	+1.0
1,716,116	-		Pf6N2E2_1467	0.44	+0.2
1,716,116	-		Pf6N2E2_1467	0.44	+0.4
1,716,142	+		Pf6N2E2_1467	0.45	+0.4
1,716,142	+		Pf6N2E2_1467	0.45	-0.5
1,716,143	-		Pf6N2E2_1467	0.45	-1.2
1,716,648	+		Pf6N2E2_1467	0.62	+0.8
1,716,667	+		Pf6N2E2_1467	0.63	+0.1
1,716,667	+		Pf6N2E2_1467	0.63	+0.0
1,716,668	-		Pf6N2E2_1467	0.63	+0.3
1,716,668	-		Pf6N2E2_1467	0.63	+0.8
1,716,725	-		Pf6N2E2_1467	0.65	-0.2
1,716,760	+		Pf6N2E2_1467	0.66	+0.9
1,716,979	+		Pf6N2E2_1467	0.74	+1.1
1,716,992	+		Pf6N2E2_1467	0.74	-0.1
1,717,393	+		Pf6N2E2_1467	0.88	-0.2
1,717,394	-		Pf6N2E2_1467	0.88	+0.0
1,717,394	-		Pf6N2E2_1467	0.88	+0.3
1,717,404	+		Pf6N2E2_1467	0.89	+0.8
1,717,405	-		Pf6N2E2_1467	0.89	-0.5
1,717,405	-		Pf6N2E2_1467	0.89	+0.5
1,717,405	-		Pf6N2E2_1467	0.89	+0.2
1,717,830	+				+0.3
1,717,831	-				+0.7
1,718,085	+		Pf6N2E2_1468	0.23	-0.6
1,718,311	-		Pf6N2E2_1468	0.38	-0.3
1,718,482	+		Pf6N2E2_1468	0.49	+1.0
1,718,482	+		Pf6N2E2_1468	0.49	+0.0
1,718,483	-		Pf6N2E2_1468	0.49	-0.1
1,718,485	-		Pf6N2E2_1468	0.49	-0.2
1,718,485	-		Pf6N2E2_1468	0.49	-0.4
1,718,485	-		Pf6N2E2_1468	0.49	+0.4
1,718,594	-		Pf6N2E2_1468	0.56	-0.2
1,718,625	+		Pf6N2E2_1468	0.58	+1.5
1,718,625	+		Pf6N2E2_1468	0.58	+0.3
1,718,625	+		Pf6N2E2_1468	0.58	+0.1
1,718,625	+		Pf6N2E2_1468	0.58	-0.6
1,718,625	+		Pf6N2E2_1468	0.58	-0.6
1,718,626	-		Pf6N2E2_1468	0.58	-0.3
1,718,626	-		Pf6N2E2_1468	0.58	-0.2
1,718,626	-		Pf6N2E2_1468	0.58	-1.8
1,718,626	-		Pf6N2E2_1468	0.58	-0.2
1,718,631	+		Pf6N2E2_1468	0.58	+0.1
1,718,631	+		Pf6N2E2_1468	0.58	-0.5
1,718,631	+		Pf6N2E2_1468	0.58	-0.6
1,718,632	-		Pf6N2E2_1468	0.58	+1.2