Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1440

Experiment: Gjerstad humics 0.5 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gjerstad humics 0.5 M
1,689,445	+		Pf6N2E2_1439	0.13	-1.0
1,689,481	+		Pf6N2E2_1439	0.19	-0.8
1,689,481	+		Pf6N2E2_1439	0.19	+1.3
1,689,481	+		Pf6N2E2_1439	0.19	-0.6
1,689,481	+		Pf6N2E2_1439	0.19	+0.0
1,689,482	-		Pf6N2E2_1439	0.19	+0.7
1,689,482	-		Pf6N2E2_1439	0.19	+0.2
1,689,482	-		Pf6N2E2_1439	0.19	+1.0
1,689,672	-		Pf6N2E2_1439	0.52	-0.8
1,689,672	-		Pf6N2E2_1439	0.52	+0.5
1,689,685	+		Pf6N2E2_1439	0.54	+2.6
1,689,685	+		Pf6N2E2_1439	0.54	+1.0
1,689,685	+		Pf6N2E2_1439	0.54	+0.5
1,689,685	+		Pf6N2E2_1439	0.54	+0.7
1,689,685	+		Pf6N2E2_1439	0.54	+0.6
1,689,686	-		Pf6N2E2_1439	0.55	+0.2
1,689,686	-		Pf6N2E2_1439	0.55	-0.6
1,689,686	-		Pf6N2E2_1439	0.55	-0.2
1,689,686	-		Pf6N2E2_1439	0.55	-0.6
1,689,706	+		Pf6N2E2_1439	0.58	-0.9
1,689,707	-		Pf6N2E2_1439	0.58	-0.4
1,689,781	+		Pf6N2E2_1439	0.71	+1.3
1,690,094	-				-1.6
1,690,094	-				+1.7
1,690,094	-				-0.8
1,690,094	-				-2.3
1,690,094	-				-0.7
1,690,094	-				+1.4
1,690,098	-				+1.1
1,690,098	-				-0.1
1,690,098	-				+0.2
1,690,227	+				+0.6
1,690,228	-				+0.6
1,690,277	-				+1.1
1,690,277	-				+0.8
1,690,330	-				-0.3
1,690,330	-				-0.1
1,690,340	+				-1.7
1,690,351	-				+0.8
1,690,596	+		Pf6N2E2_1440	0.26	-1.6
1,690,596	+		Pf6N2E2_1440	0.26	-0.2
1,690,614	+		Pf6N2E2_1440	0.28	+0.6
1,690,615	-		Pf6N2E2_1440	0.28	-0.8
1,690,751	+		Pf6N2E2_1440	0.48	+0.2
1,690,751	+		Pf6N2E2_1440	0.48	-1.3
1,690,752	-		Pf6N2E2_1440	0.48	-2.0
1,690,752	-		Pf6N2E2_1440	0.48	-0.3
1,691,020	-		Pf6N2E2_1440	0.86	-1.3
1,691,065	+				-0.9
1,691,066	-				+1.0
1,691,066	-				-0.6
1,691,066	-				-0.7
1,691,137	-				-0.5
1,691,251	-		Pf6N2E2_1441	0.13	+0.4
1,691,354	+		Pf6N2E2_1441	0.24	+0.6
1,691,354	+		Pf6N2E2_1441	0.24	-0.3
1,691,355	-		Pf6N2E2_1441	0.24	+0.5
1,692,079	-				+0.8
1,692,101	-				+1.0