Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1158

Experiment: Gjerstad humics 0.5 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gjerstad humics 0.5 M
1,354,180	+				-1.8
1,354,180	+				-0.1
1,354,180	+				+0.3
1,354,181	-				-0.4
1,354,253	-				+0.8
1,354,270	-				+0.3
1,354,350	+		Pf6N2E2_1157	0.12	+0.2
1,354,350	+		Pf6N2E2_1157	0.12	-0.4
1,354,408	+		Pf6N2E2_1157	0.20	-1.2
1,354,461	+		Pf6N2E2_1157	0.27	+0.3
1,354,762	+		Pf6N2E2_1157	0.65	-0.1
1,354,779	+		Pf6N2E2_1157	0.67	+0.7
1,354,780	-		Pf6N2E2_1157	0.67	-0.6
1,354,973	-				-1.5
1,355,109	+				+0.4
1,355,109	+				+0.5
1,355,130	-				+1.0
1,355,463	+		Pf6N2E2_1158	0.35	-0.9
1,355,463	+		Pf6N2E2_1158	0.35	+0.1
1,355,464	-		Pf6N2E2_1158	0.35	+0.1
1,355,464	-		Pf6N2E2_1158	0.35	-1.3
1,355,464	-		Pf6N2E2_1158	0.35	+0.3
1,355,477	+		Pf6N2E2_1158	0.36	-0.4
1,355,478	-		Pf6N2E2_1158	0.36	-0.4
1,355,551	-		Pf6N2E2_1158	0.44	-0.3
1,355,562	+		Pf6N2E2_1158	0.45	+0.7
1,355,562	+		Pf6N2E2_1158	0.45	+0.7
1,355,563	-		Pf6N2E2_1158	0.45	-0.7
1,355,789	-		Pf6N2E2_1158	0.69	-0.5
1,355,937	-		Pf6N2E2_1158	0.85	-0.3
1,356,038	+				-0.2
1,356,110	+				+0.3
1,356,110	+				+2.2
1,356,110	+				+0.5
1,356,111	-				+0.5
1,356,111	-				-1.8
1,356,111	-				+1.0
1,356,111	-				-0.0
1,356,171	+				-0.5
1,356,425	+				+0.4
1,356,425	+				-1.5
1,356,425	+				-0.3
1,356,425	+				+0.1
1,356,687	+		Pf6N2E2_1159	0.27	-1.2
1,356,687	+		Pf6N2E2_1159	0.27	+0.1
1,356,687	+		Pf6N2E2_1159	0.27	-0.6
1,356,687	+		Pf6N2E2_1159	0.27	-0.3
1,356,855	+		Pf6N2E2_1159	0.40	-0.5
1,356,856	-		Pf6N2E2_1159	0.40	-0.0