Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3447 and Dsui_3448 overlap by 1 nucleotides Dsui_3448 and Dsui_3449 are separated by 66 nucleotides
Dsui_3447: Dsui_3447 - signal transduction histidine kinase, at 3,706,188 to 3,707,558
_3447
Dsui_3448: Dsui_3448 - response regulator with CheY-like receiver domain and winged-helix DNA-binding domain, at 3,707,558 to 3,708,256
_3448
Dsui_3449: Dsui_3449 - PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein, at 3,708,323 to 3,710,467
_3449
Position (kb)
3707
3708
3709 Strain fitness (log2 ratio)
-2
-1
0
1 at 3706.848 kb on + strand at 3706.958 kb on - strand at 3707.138 kb on - strand, within Dsui_3447 at 3707.399 kb on + strand at 3707.400 kb on - strand, within Dsui_3447 at 3707.432 kb on + strand at 3707.475 kb on + strand at 3707.633 kb on - strand, within Dsui_3448 at 3707.635 kb on + strand at 3707.824 kb on - strand, within Dsui_3448 at 3707.907 kb on - strand, within Dsui_3448 at 3708.043 kb on - strand, within Dsui_3448 at 3708.103 kb on - strand, within Dsui_3448 at 3708.134 kb on + strand at 3708.137 kb on - strand, within Dsui_3448 at 3708.234 kb on - strand at 3708.266 kb on - strand at 3708.266 kb on - strand at 3708.339 kb on - strand at 3708.667 kb on + strand, within Dsui_3449 at 3708.726 kb on - strand, within Dsui_3449 at 3709.049 kb on - strand at 3709.183 kb on + strand, within Dsui_3449 at 3709.209 kb on + strand, within Dsui_3449 at 3709.223 kb on - strand, within Dsui_3449 at 3709.256 kb on + strand, within Dsui_3449
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 3,706,848 + -0.3 3,706,958 - +0.7 3,707,138 - Dsui_3447 0.69 -0.8 3,707,399 + +0.7 3,707,400 - Dsui_3447 0.88 -0.8 3,707,432 + +0.7 3,707,475 + +0.7 3,707,633 - Dsui_3448 0.11 -1.3 3,707,635 + -0.8 3,707,824 - Dsui_3448 0.38 -2.1 3,707,907 - Dsui_3448 0.50 -1.6 3,708,043 - Dsui_3448 0.69 -0.8 3,708,103 - Dsui_3448 0.78 -1.8 3,708,134 + +0.7 3,708,137 - Dsui_3448 0.83 -0.3 3,708,234 - -1.8 3,708,266 - +0.7 3,708,266 - +0.7 3,708,339 - +0.7 3,708,667 + Dsui_3449 0.16 +0.1 3,708,726 - Dsui_3449 0.19 -1.8 3,709,049 - -0.3 3,709,183 + Dsui_3449 0.40 +0.1 3,709,209 + Dsui_3449 0.41 +0.3 3,709,223 - Dsui_3449 0.42 +0.7 3,709,256 + Dsui_3449 0.43 +0.2
Or see this region's nucleotide sequence