Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2940 and Dsui_2941 are separated by 201 nucleotides Dsui_2941 and Dsui_2942 are separated by 81 nucleotides Dsui_2942 and Dsui_2943 are separated by 88 nucleotides
Dsui_2940: Dsui_2940 - hypothetical protein, at 3,145,796 to 3,146,251
_2940
Dsui_2941: Dsui_2941 - hypothetical protein, at 3,146,453 to 3,146,929
_2941
Dsui_2942: Dsui_2942 - ABC-type Fe3+ transport system, permease component, at 3,147,011 to 3,148,663
_2942
Dsui_2943: Dsui_2943 - ABC-type spermidine/putrescine transport system, ATPase component, at 3,148,752 to 3,149,822
_2943
Position (kb)
3147
3148
3149 Strain fitness (log2 ratio)
-2
-1
0
1 at 3146.019 kb on - strand, within Dsui_2940 at 3146.050 kb on - strand, within Dsui_2940 at 3146.050 kb on - strand, within Dsui_2940 at 3146.058 kb on - strand, within Dsui_2940 at 3146.058 kb on - strand, within Dsui_2940 at 3146.070 kb on - strand, within Dsui_2940 at 3146.080 kb on - strand, within Dsui_2940 at 3146.107 kb on - strand, within Dsui_2940 at 3146.110 kb on - strand, within Dsui_2940 at 3146.126 kb on - strand, within Dsui_2940 at 3146.161 kb on - strand, within Dsui_2940 at 3146.205 kb on - strand, within Dsui_2940 at 3146.278 kb on - strand at 3146.278 kb on - strand at 3146.313 kb on - strand at 3146.313 kb on - strand at 3146.379 kb on - strand at 3146.379 kb on - strand at 3146.419 kb on - strand at 3146.453 kb on - strand at 3146.486 kb on - strand at 3146.490 kb on + strand at 3146.492 kb on - strand at 3146.509 kb on - strand, within Dsui_2941 at 3146.509 kb on - strand, within Dsui_2941 at 3146.553 kb on - strand, within Dsui_2941 at 3146.635 kb on - strand, within Dsui_2941 at 3146.691 kb on - strand, within Dsui_2941 at 3146.707 kb on - strand, within Dsui_2941 at 3146.858 kb on - strand, within Dsui_2941 at 3146.914 kb on - strand at 3147.132 kb on - strand at 3147.177 kb on - strand, within Dsui_2942 at 3147.225 kb on - strand, within Dsui_2942 at 3147.225 kb on - strand, within Dsui_2942 at 3147.237 kb on + strand at 3147.245 kb on - strand, within Dsui_2942 at 3147.286 kb on + strand at 3147.371 kb on - strand, within Dsui_2942 at 3147.379 kb on + strand at 3147.392 kb on - strand, within Dsui_2942 at 3147.392 kb on - strand, within Dsui_2942 at 3147.392 kb on - strand, within Dsui_2942 at 3147.496 kb on + strand, within Dsui_2942 at 3147.521 kb on - strand, within Dsui_2942 at 3147.533 kb on - strand, within Dsui_2942 at 3147.556 kb on - strand, within Dsui_2942 at 3147.609 kb on - strand, within Dsui_2942 at 3147.664 kb on + strand at 3147.685 kb on + strand at 3147.690 kb on + strand, within Dsui_2942 at 3147.742 kb on + strand at 3147.827 kb on - strand, within Dsui_2942 at 3148.009 kb on - strand, within Dsui_2942 at 3148.052 kb on - strand, within Dsui_2942 at 3148.096 kb on - strand, within Dsui_2942 at 3148.134 kb on - strand, within Dsui_2942 at 3148.134 kb on - strand, within Dsui_2942 at 3148.169 kb on - strand, within Dsui_2942 at 3148.169 kb on - strand, within Dsui_2942 at 3148.208 kb on + strand at 3148.218 kb on - strand, within Dsui_2942 at 3148.286 kb on - strand, within Dsui_2942 at 3148.318 kb on - strand, within Dsui_2942 at 3148.318 kb on - strand, within Dsui_2942 at 3148.318 kb on - strand, within Dsui_2942 at 3148.318 kb on - strand, within Dsui_2942 at 3148.363 kb on - strand, within Dsui_2942 at 3148.367 kb on + strand at 3148.454 kb on - strand, within Dsui_2942 at 3148.465 kb on + strand at 3148.468 kb on - strand, within Dsui_2942 at 3148.495 kb on + strand, within Dsui_2942 at 3148.587 kb on + strand at 3148.732 kb on + strand at 3148.732 kb on + strand at 3148.744 kb on + strand at 3148.744 kb on + strand at 3148.752 kb on - strand at 3148.752 kb on - strand at 3148.784 kb on + strand at 3148.784 kb on + strand at 3148.792 kb on - strand at 3148.803 kb on + strand at 3149.019 kb on - strand, within Dsui_2943 at 3149.060 kb on - strand at 3149.247 kb on + strand, within Dsui_2943 at 3149.326 kb on + strand, within Dsui_2943 at 3149.336 kb on + strand, within Dsui_2943 at 3149.406 kb on + strand, within Dsui_2943 at 3149.462 kb on + strand, within Dsui_2943 at 3149.479 kb on + strand, within Dsui_2943 at 3149.597 kb on + strand, within Dsui_2943 at 3149.635 kb on - strand, within Dsui_2943 at 3149.654 kb on + strand, within Dsui_2943
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 3,146,019 - Dsui_2940 0.49 +0.9 3,146,050 - Dsui_2940 0.56 -0.7 3,146,050 - Dsui_2940 0.56 -1.4 3,146,058 - Dsui_2940 0.57 +0.9 3,146,058 - Dsui_2940 0.57 -0.1 3,146,070 - Dsui_2940 0.60 +0.9 3,146,080 - Dsui_2940 0.62 -0.1 3,146,107 - Dsui_2940 0.68 +0.9 3,146,110 - Dsui_2940 0.69 +0.2 3,146,126 - Dsui_2940 0.72 -1.1 3,146,161 - Dsui_2940 0.80 -0.1 3,146,205 - Dsui_2940 0.90 -0.7 3,146,278 - -1.1 3,146,278 - +0.9 3,146,313 - -0.1 3,146,313 - -0.1 3,146,379 - +0.9 3,146,379 - -0.7 3,146,419 - -1.9 3,146,453 - +0.9 3,146,486 - -0.7 3,146,490 + -1.1 3,146,492 - +0.9 3,146,509 - Dsui_2941 0.12 -0.7 3,146,509 - Dsui_2941 0.12 -1.4 3,146,553 - Dsui_2941 0.21 +0.9 3,146,635 - Dsui_2941 0.38 +0.9 3,146,691 - Dsui_2941 0.50 +0.9 3,146,707 - Dsui_2941 0.53 -1.1 3,146,858 - Dsui_2941 0.85 -0.7 3,146,914 - -1.0 3,147,132 - -0.7 3,147,177 - Dsui_2942 0.10 -0.0 3,147,225 - Dsui_2942 0.13 -0.3 3,147,225 - Dsui_2942 0.13 -0.7 3,147,237 + +0.9 3,147,245 - Dsui_2942 0.14 -0.4 3,147,286 + +0.9 3,147,371 - Dsui_2942 0.22 +0.2 3,147,379 + +0.9 3,147,392 - Dsui_2942 0.23 -0.1 3,147,392 - Dsui_2942 0.23 -0.2 3,147,392 - Dsui_2942 0.23 -0.0 3,147,496 + Dsui_2942 0.29 -0.1 3,147,521 - Dsui_2942 0.31 +0.1 3,147,533 - Dsui_2942 0.32 -0.3 3,147,556 - Dsui_2942 0.33 -0.2 3,147,609 - Dsui_2942 0.36 +0.1 3,147,664 + -0.7 3,147,685 + +0.9 3,147,690 + Dsui_2942 0.41 -0.1 3,147,742 + -0.7 3,147,827 - Dsui_2942 0.49 -0.2 3,148,009 - Dsui_2942 0.60 -0.1 3,148,052 - Dsui_2942 0.63 -0.2 3,148,096 - Dsui_2942 0.66 -0.6 3,148,134 - Dsui_2942 0.68 -0.3 3,148,134 - Dsui_2942 0.68 -0.3 3,148,169 - Dsui_2942 0.70 -0.2 3,148,169 - Dsui_2942 0.70 -1.0 3,148,208 + +0.9 3,148,218 - Dsui_2942 0.73 +0.5 3,148,286 - Dsui_2942 0.77 -0.2 3,148,318 - Dsui_2942 0.79 -0.2 3,148,318 - Dsui_2942 0.79 -0.2 3,148,318 - Dsui_2942 0.79 -0.2 3,148,318 - Dsui_2942 0.79 +0.1 3,148,363 - Dsui_2942 0.82 -0.4 3,148,367 + +0.9 3,148,454 - Dsui_2942 0.87 -0.1 3,148,465 + +0.9 3,148,468 - Dsui_2942 0.88 -0.2 3,148,495 + Dsui_2942 0.90 -1.4 3,148,587 + +0.9 3,148,732 + -1.2 3,148,732 + -0.5 3,148,744 + -0.5 3,148,744 + -0.1 3,148,752 - -0.1 3,148,752 - +0.9 3,148,784 + -0.4 3,148,784 + -0.1 3,148,792 - +0.9 3,148,803 + -0.1 3,149,019 - Dsui_2943 0.25 -1.1 3,149,060 - +0.9 3,149,247 + Dsui_2943 0.46 -0.2 3,149,326 + Dsui_2943 0.54 -1.0 3,149,336 + Dsui_2943 0.55 -0.4 3,149,406 + Dsui_2943 0.61 +0.2 3,149,462 + Dsui_2943 0.66 -0.8 3,149,479 + Dsui_2943 0.68 -0.4 3,149,597 + Dsui_2943 0.79 -1.8 3,149,635 - Dsui_2943 0.82 -0.1 3,149,654 + Dsui_2943 0.84 -0.0
Or see this region's nucleotide sequence