Strain Fitness in Dechlorosoma suillum PS around Dsui_2268

Experiment: propionate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_2267 and Dsui_2268 are separated by 466 nucleotidesDsui_2268 and Dsui_2269 are separated by 45 nucleotidesDsui_2269 and Dsui_2270 are separated by 280 nucleotides Dsui_2267: Dsui_2267 - hypothetical protein, at 2,418,914 to 2,419,648 _2267 Dsui_2268: Dsui_2268 - putative lactoylglutathione lyase, at 2,420,115 to 2,420,552 _2268 Dsui_2269: Dsui_2269 - SOS regulatory protein LexA, at 2,420,598 to 2,421,209 _2269 Dsui_2270: Dsui_2270 - hypothetical protein, at 2,421,490 to 2,421,693 _2270 Position (kb) 2420 2421Strain fitness (log2 ratio) -2 -1 0 1at 2419.517 kb on + strandat 2419.522 kb on + strandat 2419.620 kb on - strandat 2419.659 kb on + strandat 2419.850 kb on - strandat 2419.855 kb on + strandat 2419.863 kb on - strandat 2419.972 kb on - strandat 2419.979 kb on - strandat 2420.007 kb on - strandat 2420.177 kb on + strandat 2420.234 kb on - strand, within Dsui_2268at 2420.269 kb on + strandat 2420.269 kb on + strandat 2420.269 kb on + strandat 2420.277 kb on - strand, within Dsui_2268at 2420.277 kb on - strand, within Dsui_2268at 2420.342 kb on + strandat 2420.411 kb on + strandat 2420.424 kb on - strand, within Dsui_2268at 2420.469 kb on + strandat 2420.530 kb on - strandat 2420.959 kb on - strand, within Dsui_2269at 2421.207 kb on - strandat 2421.440 kb on + strandat 2421.487 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction propionate (C)
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2,419,517 + -0.0
2,419,522 + +1.0
2,419,620 - -0.0
2,419,659 + -0.0
2,419,850 - +1.0
2,419,855 + +1.0
2,419,863 - -0.0
2,419,972 - -1.0
2,419,979 - +1.0
2,420,007 - -0.6
2,420,177 + +1.0
2,420,234 - Dsui_2268 0.27 +0.2
2,420,269 + +1.0
2,420,269 + +1.0
2,420,269 + -0.0
2,420,277 - Dsui_2268 0.37 +1.2
2,420,277 - Dsui_2268 0.37 -0.6
2,420,342 + +1.0
2,420,411 + +1.0
2,420,424 - Dsui_2268 0.71 -0.6
2,420,469 + -0.0
2,420,530 - -0.9
2,420,959 - Dsui_2269 0.59 -2.1
2,421,207 - -0.4
2,421,440 + +1.0
2,421,487 + -0.0

Or see this region's nucleotide sequence