Strain Fitness in Dechlorosoma suillum PS around Dsui_2245

Experiment: propionate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_2244 and Dsui_2245 are separated by 187 nucleotidesDsui_2245 and Dsui_2246 are separated by 11 nucleotidesDsui_2246 and Dsui_2247 are separated by 9 nucleotides Dsui_2244: Dsui_2244 - DNA mismatch repair protein MutS, at 2,390,804 to 2,393,407 _2244 Dsui_2245: Dsui_2245 - protein of unknown function (DUF1924), at 2,393,595 to 2,394,017 _2245 Dsui_2246: Dsui_2246 - Diheme cytochrome c, at 2,394,029 to 2,394,508 _2246 Dsui_2247: Dsui_2247 - cytochrome b, at 2,394,518 to 2,395,177 _2247 Position (kb) 2393 2394 2395Strain fitness (log2 ratio) -1 0 1at 2392.614 kb on - strand, within Dsui_2244at 2392.655 kb on - strand, within Dsui_2244at 2392.671 kb on - strand, within Dsui_2244at 2392.764 kb on - strand, within Dsui_2244at 2392.899 kb on - strand, within Dsui_2244at 2392.945 kb on - strand, within Dsui_2244at 2392.945 kb on - strand, within Dsui_2244at 2392.954 kb on + strand, within Dsui_2244at 2393.232 kb on - strandat 2393.232 kb on - strandat 2393.232 kb on - strandat 2393.244 kb on + strandat 2393.337 kb on - strandat 2393.354 kb on - strandat 2393.411 kb on - strandat 2393.412 kb on - strandat 2393.519 kb on + strandat 2393.685 kb on + strandat 2393.775 kb on + strandat 2393.783 kb on - strandat 2393.783 kb on - strandat 2394.067 kb on - strandat 2394.180 kb on + strandat 2394.188 kb on - strandat 2394.200 kb on - strandat 2394.277 kb on - strandat 2394.312 kb on + strand, within Dsui_2246at 2394.438 kb on - strandat 2394.628 kb on - strandat 2394.993 kb on - strand, within Dsui_2247

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Per-strain Table

Position Strand Gene LocusTag Fraction propionate (C)
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2,392,614 - Dsui_2244 0.70 -0.5
2,392,655 - Dsui_2244 0.71 -0.6
2,392,671 - Dsui_2244 0.72 -0.1
2,392,764 - Dsui_2244 0.75 +0.2
2,392,899 - Dsui_2244 0.80 +0.1
2,392,945 - Dsui_2244 0.82 -0.8
2,392,945 - Dsui_2244 0.82 -0.6
2,392,954 + Dsui_2244 0.83 -0.7
2,393,232 - -0.6
2,393,232 - +0.0
2,393,232 - -0.3
2,393,244 + +0.9
2,393,337 - -0.6
2,393,354 - -0.8
2,393,411 - +0.2
2,393,412 - -0.7
2,393,519 + -0.1
2,393,685 + -0.1
2,393,775 + +0.9
2,393,783 - +0.9
2,393,783 - +0.9
2,394,067 - +0.9
2,394,180 + -0.1
2,394,188 - +0.9
2,394,200 - -0.6
2,394,277 - +0.9
2,394,312 + Dsui_2246 0.59 -0.1
2,394,438 - -1.1
2,394,628 - -0.6
2,394,993 - Dsui_2247 0.72 -1.4

Or see this region's nucleotide sequence