Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1460 and Dsui_1461 are separated by 219 nucleotides Dsui_1461 and Dsui_1462 overlap by 4 nucleotides Dsui_1462 and Dsui_1463 are separated by 107 nucleotides
Dsui_1460: Dsui_1460 - cAMP-binding protein, at 1,519,517 to 1,520,209
_1460
Dsui_1461: Dsui_1461 - RND family efflux transporter, MFP subunit, at 1,520,429 to 1,521,598
_1461
Dsui_1462: Dsui_1462 - ABC-type antimicrobial peptide transport system, ATPase component, at 1,521,595 to 1,522,398
_1462
Dsui_1463: Dsui_1463 - transcriptional activator of acetoin/glycerol metabolism, at 1,522,506 to 1,524,446
_1463
Position (kb)
1520
1521
1522 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1519.515 kb on + strand at 1519.530 kb on - strand at 1519.636 kb on + strand, within Dsui_1460 at 1519.679 kb on - strand, within Dsui_1460 at 1519.764 kb on + strand at 1519.770 kb on - strand, within Dsui_1460 at 1519.770 kb on - strand, within Dsui_1460 at 1519.800 kb on - strand, within Dsui_1460 at 1519.869 kb on + strand, within Dsui_1460 at 1519.888 kb on - strand, within Dsui_1460 at 1519.903 kb on + strand, within Dsui_1460 at 1519.907 kb on - strand, within Dsui_1460 at 1519.920 kb on + strand, within Dsui_1460 at 1519.926 kb on + strand at 1519.928 kb on - strand, within Dsui_1460 at 1519.940 kb on + strand at 1519.948 kb on - strand, within Dsui_1460 at 1519.948 kb on - strand, within Dsui_1460 at 1519.959 kb on + strand, within Dsui_1460 at 1519.963 kb on + strand at 1519.966 kb on - strand, within Dsui_1460 at 1519.966 kb on - strand, within Dsui_1460 at 1519.966 kb on - strand, within Dsui_1460 at 1519.967 kb on - strand, within Dsui_1460 at 1519.997 kb on + strand, within Dsui_1460 at 1520.005 kb on - strand, within Dsui_1460 at 1520.027 kb on - strand, within Dsui_1460 at 1520.044 kb on + strand, within Dsui_1460 at 1520.252 kb on + strand at 1520.258 kb on - strand at 1520.258 kb on - strand at 1520.273 kb on + strand at 1520.363 kb on - strand at 1520.426 kb on + strand at 1520.439 kb on - strand at 1520.439 kb on - strand at 1520.622 kb on + strand, within Dsui_1461 at 1520.627 kb on + strand, within Dsui_1461 at 1520.628 kb on - strand, within Dsui_1461 at 1520.630 kb on - strand, within Dsui_1461 at 1520.635 kb on - strand at 1520.714 kb on - strand at 1520.779 kb on + strand, within Dsui_1461 at 1520.787 kb on - strand, within Dsui_1461 at 1520.851 kb on + strand, within Dsui_1461 at 1520.951 kb on + strand, within Dsui_1461 at 1520.995 kb on - strand, within Dsui_1461 at 1521.016 kb on - strand, within Dsui_1461 at 1521.036 kb on - strand at 1521.128 kb on - strand, within Dsui_1461 at 1521.145 kb on - strand, within Dsui_1461 at 1521.147 kb on + strand, within Dsui_1461 at 1521.163 kb on + strand, within Dsui_1461 at 1521.170 kb on - strand, within Dsui_1461 at 1521.272 kb on + strand, within Dsui_1461 at 1521.360 kb on - strand, within Dsui_1461 at 1521.396 kb on + strand, within Dsui_1461 at 1521.577 kb on + strand at 1521.869 kb on + strand, within Dsui_1462 at 1522.292 kb on - strand, within Dsui_1462 at 1522.530 kb on + strand at 1522.558 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 1,519,515 + -2.3 1,519,530 - -0.5 1,519,636 + Dsui_1460 0.17 -1.3 1,519,679 - Dsui_1460 0.23 +0.4 1,519,764 + +0.7 1,519,770 - Dsui_1460 0.37 -0.2 1,519,770 - Dsui_1460 0.37 +0.3 1,519,800 - Dsui_1460 0.41 +0.2 1,519,869 + Dsui_1460 0.51 +0.7 1,519,888 - Dsui_1460 0.54 +0.1 1,519,903 + Dsui_1460 0.56 -1.9 1,519,907 - Dsui_1460 0.56 +0.4 1,519,920 + Dsui_1460 0.58 -0.3 1,519,926 + +0.7 1,519,928 - Dsui_1460 0.59 -0.1 1,519,940 + +0.7 1,519,948 - Dsui_1460 0.62 +0.2 1,519,948 - Dsui_1460 0.62 +0.2 1,519,959 + Dsui_1460 0.64 +0.7 1,519,963 + -0.3 1,519,966 - Dsui_1460 0.65 -0.1 1,519,966 - Dsui_1460 0.65 +0.1 1,519,966 - Dsui_1460 0.65 +0.2 1,519,967 - Dsui_1460 0.65 +0.1 1,519,997 + Dsui_1460 0.69 -0.3 1,520,005 - Dsui_1460 0.70 +0.3 1,520,027 - Dsui_1460 0.74 +0.0 1,520,044 + Dsui_1460 0.76 -1.9 1,520,252 + -0.3 1,520,258 - +0.7 1,520,258 - +0.7 1,520,273 + -0.3 1,520,363 - -0.3 1,520,426 + -1.6 1,520,439 - +0.7 1,520,439 - -0.3 1,520,622 + Dsui_1461 0.16 -1.7 1,520,627 + Dsui_1461 0.17 -0.7 1,520,628 - Dsui_1461 0.17 -0.3 1,520,630 - Dsui_1461 0.17 -0.9 1,520,635 - +0.7 1,520,714 - +0.7 1,520,779 + Dsui_1461 0.30 -1.6 1,520,787 - Dsui_1461 0.31 -3.3 1,520,851 + Dsui_1461 0.36 -1.7 1,520,951 + Dsui_1461 0.45 -0.2 1,520,995 - Dsui_1461 0.48 -1.6 1,521,016 - Dsui_1461 0.50 -1.3 1,521,036 - -0.3 1,521,128 - Dsui_1461 0.60 -0.9 1,521,145 - Dsui_1461 0.61 -1.3 1,521,147 + Dsui_1461 0.61 -0.1 1,521,163 + Dsui_1461 0.63 -0.6 1,521,170 - Dsui_1461 0.63 +0.7 1,521,272 + Dsui_1461 0.72 -1.0 1,521,360 - Dsui_1461 0.80 -0.3 1,521,396 + Dsui_1461 0.83 +0.4 1,521,577 + -0.5 1,521,869 + Dsui_1462 0.34 +0.1 1,522,292 - Dsui_1462 0.87 -1.6 1,522,530 + +0.7 1,522,558 - -0.9
Or see this region's nucleotide sequence