Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1342 and Dsui_1343 are separated by 6 nucleotides Dsui_1343 and Dsui_1344 are separated by 127 nucleotides Dsui_1344 and Dsui_1345 are separated by 11 nucleotides
Dsui_1342: Dsui_1342 - FKBP-type peptidyl-prolyl cis-trans isomerase, at 1,399,475 to 1,399,819
_1342
Dsui_1343: Dsui_1343 - putative hydrolase or acyltransferase of alpha/beta superfamily, at 1,399,826 to 1,400,659
_1343
Dsui_1344: Dsui_1344 - Zn-dependent hydrolase, glyoxylase, at 1,400,787 to 1,401,752
_1344
Dsui_1345: Dsui_1345 - magnesium Mg(2+) and cobalt Co(2+) transport protein CorA, at 1,401,764 to 1,402,837
_1345
Position (kb)
1400
1401
1402 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1399.789 kb on - strand at 1399.831 kb on - strand at 1399.879 kb on + strand at 1399.887 kb on - strand at 1399.887 kb on - strand at 1399.919 kb on + strand, within Dsui_1343 at 1399.919 kb on + strand, within Dsui_1343 at 1399.920 kb on + strand, within Dsui_1343 at 1399.924 kb on + strand, within Dsui_1343 at 1399.926 kb on + strand, within Dsui_1343 at 1399.927 kb on - strand, within Dsui_1343 at 1399.927 kb on - strand, within Dsui_1343 at 1399.932 kb on - strand, within Dsui_1343 at 1399.953 kb on + strand, within Dsui_1343 at 1399.961 kb on - strand, within Dsui_1343 at 1399.961 kb on - strand, within Dsui_1343 at 1399.961 kb on - strand, within Dsui_1343 at 1399.963 kb on + strand, within Dsui_1343 at 1399.971 kb on - strand, within Dsui_1343 at 1400.006 kb on - strand, within Dsui_1343 at 1400.014 kb on + strand, within Dsui_1343 at 1400.070 kb on + strand, within Dsui_1343 at 1400.109 kb on + strand, within Dsui_1343 at 1400.111 kb on - strand, within Dsui_1343 at 1400.111 kb on - strand, within Dsui_1343 at 1400.116 kb on + strand, within Dsui_1343 at 1400.117 kb on - strand, within Dsui_1343 at 1400.169 kb on + strand, within Dsui_1343 at 1400.203 kb on - strand, within Dsui_1343 at 1400.239 kb on - strand, within Dsui_1343 at 1400.282 kb on - strand, within Dsui_1343 at 1400.290 kb on - strand, within Dsui_1343 at 1400.292 kb on - strand, within Dsui_1343 at 1400.367 kb on + strand, within Dsui_1343 at 1400.375 kb on - strand, within Dsui_1343 at 1400.375 kb on - strand, within Dsui_1343 at 1400.386 kb on - strand, within Dsui_1343 at 1400.395 kb on + strand, within Dsui_1343 at 1400.403 kb on + strand, within Dsui_1343 at 1400.403 kb on - strand, within Dsui_1343 at 1400.520 kb on - strand, within Dsui_1343 at 1400.523 kb on + strand, within Dsui_1343 at 1400.560 kb on - strand, within Dsui_1343 at 1400.562 kb on - strand, within Dsui_1343 at 1400.574 kb on - strand, within Dsui_1343 at 1400.659 kb on + strand at 1400.659 kb on + strand at 1400.659 kb on + strand at 1400.659 kb on + strand at 1400.661 kb on + strand at 1400.667 kb on - strand at 1400.687 kb on + strand at 1400.744 kb on - strand at 1400.752 kb on + strand at 1400.758 kb on + strand at 1400.773 kb on + strand at 1400.773 kb on + strand at 1400.775 kb on - strand at 1400.781 kb on - strand at 1400.789 kb on + strand at 1400.794 kb on + strand at 1400.814 kb on - strand at 1400.815 kb on + strand at 1400.815 kb on + strand at 1400.815 kb on + strand at 1400.815 kb on + strand at 1400.815 kb on + strand at 1400.823 kb on - strand at 1400.823 kb on - strand at 1400.826 kb on + strand at 1400.833 kb on - strand at 1400.907 kb on + strand, within Dsui_1344 at 1400.960 kb on - strand, within Dsui_1344 at 1400.997 kb on + strand, within Dsui_1344 at 1401.020 kb on - strand, within Dsui_1344 at 1401.031 kb on + strand, within Dsui_1344 at 1401.039 kb on - strand, within Dsui_1344 at 1401.052 kb on - strand, within Dsui_1344 at 1401.088 kb on - strand, within Dsui_1344 at 1401.100 kb on + strand, within Dsui_1344 at 1401.102 kb on + strand, within Dsui_1344 at 1401.121 kb on + strand, within Dsui_1344 at 1401.226 kb on + strand, within Dsui_1344 at 1401.241 kb on + strand, within Dsui_1344 at 1401.370 kb on - strand, within Dsui_1344 at 1401.411 kb on - strand, within Dsui_1344 at 1401.411 kb on - strand, within Dsui_1344 at 1401.416 kb on - strand, within Dsui_1344 at 1401.463 kb on + strand, within Dsui_1344 at 1401.473 kb on + strand, within Dsui_1344 at 1401.476 kb on - strand, within Dsui_1344 at 1401.481 kb on - strand, within Dsui_1344 at 1401.492 kb on + strand, within Dsui_1344 at 1401.529 kb on - strand, within Dsui_1344 at 1401.566 kb on + strand, within Dsui_1344 at 1401.645 kb on - strand, within Dsui_1344 at 1401.652 kb on - strand, within Dsui_1344 at 1401.722 kb on + strand at 1401.724 kb on + strand at 1401.799 kb on - strand at 1401.864 kb on - strand at 1401.864 kb on - strand at 1401.881 kb on - strand, within Dsui_1345 at 1401.882 kb on - strand, within Dsui_1345 at 1401.952 kb on - strand, within Dsui_1345 at 1401.959 kb on - strand, within Dsui_1345 at 1401.989 kb on - strand, within Dsui_1345 at 1402.143 kb on + strand, within Dsui_1345 at 1402.204 kb on + strand, within Dsui_1345 at 1402.212 kb on - strand, within Dsui_1345 at 1402.212 kb on - strand, within Dsui_1345 at 1402.266 kb on + strand, within Dsui_1345 at 1402.276 kb on + strand, within Dsui_1345 at 1402.319 kb on - strand, within Dsui_1345 at 1402.389 kb on + strand, within Dsui_1345 at 1402.405 kb on + strand, within Dsui_1345 at 1402.413 kb on - strand, within Dsui_1345 at 1402.435 kb on + strand, within Dsui_1345 at 1402.440 kb on + strand, within Dsui_1345 at 1402.440 kb on + strand, within Dsui_1345 at 1402.448 kb on - strand, within Dsui_1345 at 1402.448 kb on - strand, within Dsui_1345 at 1402.448 kb on - strand, within Dsui_1345 at 1402.462 kb on + strand, within Dsui_1345 at 1402.462 kb on + strand, within Dsui_1345 at 1402.469 kb on + strand, within Dsui_1345 at 1402.470 kb on - strand, within Dsui_1345 at 1402.477 kb on - strand, within Dsui_1345 at 1402.504 kb on + strand, within Dsui_1345 at 1402.531 kb on - strand, within Dsui_1345 at 1402.556 kb on - strand, within Dsui_1345 at 1402.556 kb on - strand, within Dsui_1345 at 1402.602 kb on + strand, within Dsui_1345 at 1402.684 kb on + strand, within Dsui_1345 at 1402.684 kb on + strand, within Dsui_1345 at 1402.684 kb on + strand, within Dsui_1345 at 1402.684 kb on + strand, within Dsui_1345 at 1402.738 kb on + strand at 1402.738 kb on + strand at 1402.746 kb on - strand at 1402.746 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 1,399,789 - -0.7 1,399,831 - -1.2 1,399,879 + -0.4 1,399,887 - -2.0 1,399,887 - +0.6 1,399,919 + Dsui_1343 0.11 -0.7 1,399,919 + Dsui_1343 0.11 -0.5 1,399,920 + Dsui_1343 0.11 -0.7 1,399,924 + Dsui_1343 0.12 -0.8 1,399,926 + Dsui_1343 0.12 -0.6 1,399,927 - Dsui_1343 0.12 -2.4 1,399,927 - Dsui_1343 0.12 -1.5 1,399,932 - Dsui_1343 0.13 -0.4 1,399,953 + Dsui_1343 0.15 -0.5 1,399,961 - Dsui_1343 0.16 -0.0 1,399,961 - Dsui_1343 0.16 +0.6 1,399,961 - Dsui_1343 0.16 -2.8 1,399,963 + Dsui_1343 0.16 -0.7 1,399,971 - Dsui_1343 0.17 -0.4 1,400,006 - Dsui_1343 0.22 +0.2 1,400,014 + Dsui_1343 0.23 -0.5 1,400,070 + Dsui_1343 0.29 -0.3 1,400,109 + Dsui_1343 0.34 -0.7 1,400,111 - Dsui_1343 0.34 -1.0 1,400,111 - Dsui_1343 0.34 -3.5 1,400,116 + Dsui_1343 0.35 -0.3 1,400,117 - Dsui_1343 0.35 -1.5 1,400,169 + Dsui_1343 0.41 -1.0 1,400,203 - Dsui_1343 0.45 -0.7 1,400,239 - Dsui_1343 0.50 -1.0 1,400,282 - Dsui_1343 0.55 -1.3 1,400,290 - Dsui_1343 0.56 -1.5 1,400,292 - Dsui_1343 0.56 -1.8 1,400,367 + Dsui_1343 0.65 -0.8 1,400,375 - Dsui_1343 0.66 -1.7 1,400,375 - Dsui_1343 0.66 -0.4 1,400,386 - Dsui_1343 0.67 -2.8 1,400,395 + Dsui_1343 0.68 -0.8 1,400,403 + Dsui_1343 0.69 -1.5 1,400,403 - Dsui_1343 0.69 -1.7 1,400,520 - Dsui_1343 0.83 -0.4 1,400,523 + Dsui_1343 0.84 +0.6 1,400,560 - Dsui_1343 0.88 -2.4 1,400,562 - Dsui_1343 0.88 -1.0 1,400,574 - Dsui_1343 0.90 -1.7 1,400,659 + -0.4 1,400,659 + -1.4 1,400,659 + +0.0 1,400,659 + -1.0 1,400,661 + +1.0 1,400,667 - -2.2 1,400,687 + -0.1 1,400,744 - +0.6 1,400,752 + -0.9 1,400,758 + -0.4 1,400,773 + -2.7 1,400,773 + -1.4 1,400,775 - +0.6 1,400,781 - -1.4 1,400,789 + -1.2 1,400,794 + -2.0 1,400,814 - +0.6 1,400,815 + -0.6 1,400,815 + -1.0 1,400,815 + +0.6 1,400,815 + -1.5 1,400,815 + -0.2 1,400,823 - -0.4 1,400,823 - +0.6 1,400,826 + -0.2 1,400,833 - +0.6 1,400,907 + Dsui_1344 0.12 -0.8 1,400,960 - Dsui_1344 0.18 +0.6 1,400,997 + Dsui_1344 0.22 +0.8 1,401,020 - Dsui_1344 0.24 -1.0 1,401,031 + Dsui_1344 0.25 -1.0 1,401,039 - Dsui_1344 0.26 -1.0 1,401,052 - Dsui_1344 0.27 +0.6 1,401,088 - Dsui_1344 0.31 -0.4 1,401,100 + Dsui_1344 0.32 -1.1 1,401,102 + Dsui_1344 0.33 +0.6 1,401,121 + Dsui_1344 0.35 -0.9 1,401,226 + Dsui_1344 0.45 -0.5 1,401,241 + Dsui_1344 0.47 -1.5 1,401,370 - Dsui_1344 0.60 -1.0 1,401,411 - Dsui_1344 0.65 -0.1 1,401,411 - Dsui_1344 0.65 -1.0 1,401,416 - Dsui_1344 0.65 -1.7 1,401,463 + Dsui_1344 0.70 -2.3 1,401,473 + Dsui_1344 0.71 -0.7 1,401,476 - Dsui_1344 0.71 -1.8 1,401,481 - Dsui_1344 0.72 -0.4 1,401,492 + Dsui_1344 0.73 -2.0 1,401,529 - Dsui_1344 0.77 +0.6 1,401,566 + Dsui_1344 0.81 -0.7 1,401,645 - Dsui_1344 0.89 -2.4 1,401,652 - Dsui_1344 0.90 -1.4 1,401,722 + -1.0 1,401,724 + -1.3 1,401,799 - -2.5 1,401,864 - -2.2 1,401,864 - +0.2 1,401,881 - Dsui_1345 0.11 -0.4 1,401,882 - Dsui_1345 0.11 -1.0 1,401,952 - Dsui_1345 0.18 -2.2 1,401,959 - Dsui_1345 0.18 -0.7 1,401,989 - Dsui_1345 0.21 -1.1 1,402,143 + Dsui_1345 0.35 +0.6 1,402,204 + Dsui_1345 0.41 -0.4 1,402,212 - Dsui_1345 0.42 -0.9 1,402,212 - Dsui_1345 0.42 -1.2 1,402,266 + Dsui_1345 0.47 +0.6 1,402,276 + Dsui_1345 0.48 +0.6 1,402,319 - Dsui_1345 0.52 -0.3 1,402,389 + Dsui_1345 0.58 +0.6 1,402,405 + Dsui_1345 0.60 +0.6 1,402,413 - Dsui_1345 0.60 -0.9 1,402,435 + Dsui_1345 0.62 +0.6 1,402,440 + Dsui_1345 0.63 +0.6 1,402,440 + Dsui_1345 0.63 -1.0 1,402,448 - Dsui_1345 0.64 -0.9 1,402,448 - Dsui_1345 0.64 +0.2 1,402,448 - Dsui_1345 0.64 -1.5 1,402,462 + Dsui_1345 0.65 -0.4 1,402,462 + Dsui_1345 0.65 -1.0 1,402,469 + Dsui_1345 0.66 -0.4 1,402,470 - Dsui_1345 0.66 +0.6 1,402,477 - Dsui_1345 0.66 -0.9 1,402,504 + Dsui_1345 0.69 -1.0 1,402,531 - Dsui_1345 0.71 +0.6 1,402,556 - Dsui_1345 0.74 +0.2 1,402,556 - Dsui_1345 0.74 -1.1 1,402,602 + Dsui_1345 0.78 -2.4 1,402,684 + Dsui_1345 0.86 +0.6 1,402,684 + Dsui_1345 0.86 +0.6 1,402,684 + Dsui_1345 0.86 -0.4 1,402,684 + Dsui_1345 0.86 +0.6 1,402,738 + +0.6 1,402,738 + -1.0 1,402,746 - -0.5 1,402,746 - -1.8
Or see this region's nucleotide sequence