Strain Fitness in Dechlorosoma suillum PS around Dsui_1344

Experiment: propionate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_1342 and Dsui_1343 are separated by 6 nucleotidesDsui_1343 and Dsui_1344 are separated by 127 nucleotidesDsui_1344 and Dsui_1345 are separated by 11 nucleotides Dsui_1342: Dsui_1342 - FKBP-type peptidyl-prolyl cis-trans isomerase, at 1,399,475 to 1,399,819 _1342 Dsui_1343: Dsui_1343 - putative hydrolase or acyltransferase of alpha/beta superfamily, at 1,399,826 to 1,400,659 _1343 Dsui_1344: Dsui_1344 - Zn-dependent hydrolase, glyoxylase, at 1,400,787 to 1,401,752 _1344 Dsui_1345: Dsui_1345 - magnesium Mg(2+) and cobalt Co(2+) transport protein CorA, at 1,401,764 to 1,402,837 _1345 Position (kb) 1400 1401 1402Strain fitness (log2 ratio) -3 -2 -1 0 1at 1399.789 kb on - strandat 1399.831 kb on - strandat 1399.879 kb on + strandat 1399.887 kb on - strandat 1399.887 kb on - strandat 1399.919 kb on + strand, within Dsui_1343at 1399.919 kb on + strand, within Dsui_1343at 1399.920 kb on + strand, within Dsui_1343at 1399.924 kb on + strand, within Dsui_1343at 1399.926 kb on + strand, within Dsui_1343at 1399.927 kb on - strand, within Dsui_1343at 1399.927 kb on - strand, within Dsui_1343at 1399.932 kb on - strand, within Dsui_1343at 1399.953 kb on + strand, within Dsui_1343at 1399.961 kb on - strand, within Dsui_1343at 1399.961 kb on - strand, within Dsui_1343at 1399.961 kb on - strand, within Dsui_1343at 1399.963 kb on + strand, within Dsui_1343at 1399.971 kb on - strand, within Dsui_1343at 1400.006 kb on - strand, within Dsui_1343at 1400.014 kb on + strand, within Dsui_1343at 1400.070 kb on + strand, within Dsui_1343at 1400.109 kb on + strand, within Dsui_1343at 1400.111 kb on - strand, within Dsui_1343at 1400.111 kb on - strand, within Dsui_1343at 1400.116 kb on + strand, within Dsui_1343at 1400.117 kb on - strand, within Dsui_1343at 1400.169 kb on + strand, within Dsui_1343at 1400.203 kb on - strand, within Dsui_1343at 1400.239 kb on - strand, within Dsui_1343at 1400.282 kb on - strand, within Dsui_1343at 1400.290 kb on - strand, within Dsui_1343at 1400.292 kb on - strand, within Dsui_1343at 1400.367 kb on + strand, within Dsui_1343at 1400.375 kb on - strand, within Dsui_1343at 1400.375 kb on - strand, within Dsui_1343at 1400.386 kb on - strand, within Dsui_1343at 1400.395 kb on + strand, within Dsui_1343at 1400.403 kb on + strand, within Dsui_1343at 1400.403 kb on - strand, within Dsui_1343at 1400.520 kb on - strand, within Dsui_1343at 1400.523 kb on + strand, within Dsui_1343at 1400.560 kb on - strand, within Dsui_1343at 1400.562 kb on - strand, within Dsui_1343at 1400.574 kb on - strand, within Dsui_1343at 1400.659 kb on + strandat 1400.659 kb on + strandat 1400.659 kb on + strandat 1400.659 kb on + strandat 1400.661 kb on + strandat 1400.667 kb on - strandat 1400.687 kb on + strandat 1400.744 kb on - strandat 1400.752 kb on + strandat 1400.758 kb on + strandat 1400.773 kb on + strandat 1400.773 kb on + strandat 1400.775 kb on - strandat 1400.781 kb on - strandat 1400.789 kb on + strandat 1400.794 kb on + strandat 1400.814 kb on - strandat 1400.815 kb on + strandat 1400.815 kb on + strandat 1400.815 kb on + strandat 1400.815 kb on + strandat 1400.815 kb on + strandat 1400.823 kb on - strandat 1400.823 kb on - strandat 1400.826 kb on + strandat 1400.833 kb on - strandat 1400.907 kb on + strand, within Dsui_1344at 1400.960 kb on - strand, within Dsui_1344at 1400.997 kb on + strand, within Dsui_1344at 1401.020 kb on - strand, within Dsui_1344at 1401.031 kb on + strand, within Dsui_1344at 1401.039 kb on - strand, within Dsui_1344at 1401.052 kb on - strand, within Dsui_1344at 1401.088 kb on - strand, within Dsui_1344at 1401.100 kb on + strand, within Dsui_1344at 1401.102 kb on + strand, within Dsui_1344at 1401.121 kb on + strand, within Dsui_1344at 1401.226 kb on + strand, within Dsui_1344at 1401.241 kb on + strand, within Dsui_1344at 1401.370 kb on - strand, within Dsui_1344at 1401.411 kb on - strand, within Dsui_1344at 1401.411 kb on - strand, within Dsui_1344at 1401.416 kb on - strand, within Dsui_1344at 1401.463 kb on + strand, within Dsui_1344at 1401.473 kb on + strand, within Dsui_1344at 1401.476 kb on - strand, within Dsui_1344at 1401.481 kb on - strand, within Dsui_1344at 1401.492 kb on + strand, within Dsui_1344at 1401.529 kb on - strand, within Dsui_1344at 1401.566 kb on + strand, within Dsui_1344at 1401.645 kb on - strand, within Dsui_1344at 1401.652 kb on - strand, within Dsui_1344at 1401.722 kb on + strandat 1401.724 kb on + strandat 1401.799 kb on - strandat 1401.864 kb on - strandat 1401.864 kb on - strandat 1401.881 kb on - strand, within Dsui_1345at 1401.882 kb on - strand, within Dsui_1345at 1401.952 kb on - strand, within Dsui_1345at 1401.959 kb on - strand, within Dsui_1345at 1401.989 kb on - strand, within Dsui_1345at 1402.143 kb on + strand, within Dsui_1345at 1402.204 kb on + strand, within Dsui_1345at 1402.212 kb on - strand, within Dsui_1345at 1402.212 kb on - strand, within Dsui_1345at 1402.266 kb on + strand, within Dsui_1345at 1402.276 kb on + strand, within Dsui_1345at 1402.319 kb on - strand, within Dsui_1345at 1402.389 kb on + strand, within Dsui_1345at 1402.405 kb on + strand, within Dsui_1345at 1402.413 kb on - strand, within Dsui_1345at 1402.435 kb on + strand, within Dsui_1345at 1402.440 kb on + strand, within Dsui_1345at 1402.440 kb on + strand, within Dsui_1345at 1402.448 kb on - strand, within Dsui_1345at 1402.448 kb on - strand, within Dsui_1345at 1402.448 kb on - strand, within Dsui_1345at 1402.462 kb on + strand, within Dsui_1345at 1402.462 kb on + strand, within Dsui_1345at 1402.469 kb on + strand, within Dsui_1345at 1402.470 kb on - strand, within Dsui_1345at 1402.477 kb on - strand, within Dsui_1345at 1402.504 kb on + strand, within Dsui_1345at 1402.531 kb on - strand, within Dsui_1345at 1402.556 kb on - strand, within Dsui_1345at 1402.556 kb on - strand, within Dsui_1345at 1402.602 kb on + strand, within Dsui_1345at 1402.684 kb on + strand, within Dsui_1345at 1402.684 kb on + strand, within Dsui_1345at 1402.684 kb on + strand, within Dsui_1345at 1402.684 kb on + strand, within Dsui_1345at 1402.738 kb on + strandat 1402.738 kb on + strandat 1402.746 kb on - strandat 1402.746 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction propionate (C)
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1,399,789 - -0.7
1,399,831 - -1.2
1,399,879 + -0.4
1,399,887 - -2.0
1,399,887 - +0.6
1,399,919 + Dsui_1343 0.11 -0.7
1,399,919 + Dsui_1343 0.11 -0.5
1,399,920 + Dsui_1343 0.11 -0.7
1,399,924 + Dsui_1343 0.12 -0.8
1,399,926 + Dsui_1343 0.12 -0.6
1,399,927 - Dsui_1343 0.12 -2.4
1,399,927 - Dsui_1343 0.12 -1.5
1,399,932 - Dsui_1343 0.13 -0.4
1,399,953 + Dsui_1343 0.15 -0.5
1,399,961 - Dsui_1343 0.16 -0.0
1,399,961 - Dsui_1343 0.16 +0.6
1,399,961 - Dsui_1343 0.16 -2.8
1,399,963 + Dsui_1343 0.16 -0.7
1,399,971 - Dsui_1343 0.17 -0.4
1,400,006 - Dsui_1343 0.22 +0.2
1,400,014 + Dsui_1343 0.23 -0.5
1,400,070 + Dsui_1343 0.29 -0.3
1,400,109 + Dsui_1343 0.34 -0.7
1,400,111 - Dsui_1343 0.34 -1.0
1,400,111 - Dsui_1343 0.34 -3.5
1,400,116 + Dsui_1343 0.35 -0.3
1,400,117 - Dsui_1343 0.35 -1.5
1,400,169 + Dsui_1343 0.41 -1.0
1,400,203 - Dsui_1343 0.45 -0.7
1,400,239 - Dsui_1343 0.50 -1.0
1,400,282 - Dsui_1343 0.55 -1.3
1,400,290 - Dsui_1343 0.56 -1.5
1,400,292 - Dsui_1343 0.56 -1.8
1,400,367 + Dsui_1343 0.65 -0.8
1,400,375 - Dsui_1343 0.66 -1.7
1,400,375 - Dsui_1343 0.66 -0.4
1,400,386 - Dsui_1343 0.67 -2.8
1,400,395 + Dsui_1343 0.68 -0.8
1,400,403 + Dsui_1343 0.69 -1.5
1,400,403 - Dsui_1343 0.69 -1.7
1,400,520 - Dsui_1343 0.83 -0.4
1,400,523 + Dsui_1343 0.84 +0.6
1,400,560 - Dsui_1343 0.88 -2.4
1,400,562 - Dsui_1343 0.88 -1.0
1,400,574 - Dsui_1343 0.90 -1.7
1,400,659 + -0.4
1,400,659 + -1.4
1,400,659 + +0.0
1,400,659 + -1.0
1,400,661 + +1.0
1,400,667 - -2.2
1,400,687 + -0.1
1,400,744 - +0.6
1,400,752 + -0.9
1,400,758 + -0.4
1,400,773 + -2.7
1,400,773 + -1.4
1,400,775 - +0.6
1,400,781 - -1.4
1,400,789 + -1.2
1,400,794 + -2.0
1,400,814 - +0.6
1,400,815 + -0.6
1,400,815 + -1.0
1,400,815 + +0.6
1,400,815 + -1.5
1,400,815 + -0.2
1,400,823 - -0.4
1,400,823 - +0.6
1,400,826 + -0.2
1,400,833 - +0.6
1,400,907 + Dsui_1344 0.12 -0.8
1,400,960 - Dsui_1344 0.18 +0.6
1,400,997 + Dsui_1344 0.22 +0.8
1,401,020 - Dsui_1344 0.24 -1.0
1,401,031 + Dsui_1344 0.25 -1.0
1,401,039 - Dsui_1344 0.26 -1.0
1,401,052 - Dsui_1344 0.27 +0.6
1,401,088 - Dsui_1344 0.31 -0.4
1,401,100 + Dsui_1344 0.32 -1.1
1,401,102 + Dsui_1344 0.33 +0.6
1,401,121 + Dsui_1344 0.35 -0.9
1,401,226 + Dsui_1344 0.45 -0.5
1,401,241 + Dsui_1344 0.47 -1.5
1,401,370 - Dsui_1344 0.60 -1.0
1,401,411 - Dsui_1344 0.65 -0.1
1,401,411 - Dsui_1344 0.65 -1.0
1,401,416 - Dsui_1344 0.65 -1.7
1,401,463 + Dsui_1344 0.70 -2.3
1,401,473 + Dsui_1344 0.71 -0.7
1,401,476 - Dsui_1344 0.71 -1.8
1,401,481 - Dsui_1344 0.72 -0.4
1,401,492 + Dsui_1344 0.73 -2.0
1,401,529 - Dsui_1344 0.77 +0.6
1,401,566 + Dsui_1344 0.81 -0.7
1,401,645 - Dsui_1344 0.89 -2.4
1,401,652 - Dsui_1344 0.90 -1.4
1,401,722 + -1.0
1,401,724 + -1.3
1,401,799 - -2.5
1,401,864 - -2.2
1,401,864 - +0.2
1,401,881 - Dsui_1345 0.11 -0.4
1,401,882 - Dsui_1345 0.11 -1.0
1,401,952 - Dsui_1345 0.18 -2.2
1,401,959 - Dsui_1345 0.18 -0.7
1,401,989 - Dsui_1345 0.21 -1.1
1,402,143 + Dsui_1345 0.35 +0.6
1,402,204 + Dsui_1345 0.41 -0.4
1,402,212 - Dsui_1345 0.42 -0.9
1,402,212 - Dsui_1345 0.42 -1.2
1,402,266 + Dsui_1345 0.47 +0.6
1,402,276 + Dsui_1345 0.48 +0.6
1,402,319 - Dsui_1345 0.52 -0.3
1,402,389 + Dsui_1345 0.58 +0.6
1,402,405 + Dsui_1345 0.60 +0.6
1,402,413 - Dsui_1345 0.60 -0.9
1,402,435 + Dsui_1345 0.62 +0.6
1,402,440 + Dsui_1345 0.63 +0.6
1,402,440 + Dsui_1345 0.63 -1.0
1,402,448 - Dsui_1345 0.64 -0.9
1,402,448 - Dsui_1345 0.64 +0.2
1,402,448 - Dsui_1345 0.64 -1.5
1,402,462 + Dsui_1345 0.65 -0.4
1,402,462 + Dsui_1345 0.65 -1.0
1,402,469 + Dsui_1345 0.66 -0.4
1,402,470 - Dsui_1345 0.66 +0.6
1,402,477 - Dsui_1345 0.66 -0.9
1,402,504 + Dsui_1345 0.69 -1.0
1,402,531 - Dsui_1345 0.71 +0.6
1,402,556 - Dsui_1345 0.74 +0.2
1,402,556 - Dsui_1345 0.74 -1.1
1,402,602 + Dsui_1345 0.78 -2.4
1,402,684 + Dsui_1345 0.86 +0.6
1,402,684 + Dsui_1345 0.86 +0.6
1,402,684 + Dsui_1345 0.86 -0.4
1,402,684 + Dsui_1345 0.86 +0.6
1,402,738 + +0.6
1,402,738 + -1.0
1,402,746 - -0.5
1,402,746 - -1.8

Or see this region's nucleotide sequence