Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS17030

Experiment: L-Asparagine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS17025 and BWI76_RS17030 are separated by 432 nucleotidesBWI76_RS17030 and BWI76_RS17035 are separated by 79 nucleotides BWI76_RS17025: BWI76_RS17025 - putative major type 1 subunit fimbrin, at 3,531,437 to 3,531,967 _RS17025 BWI76_RS17030: BWI76_RS17030 - cyclic nucleotide-binding domain-containing protein, at 3,532,400 to 3,533,059 _RS17030 BWI76_RS17035: BWI76_RS17035 - Crp/Fnr family transcriptional regulator, at 3,533,139 to 3,533,768 _RS17035 Position (kb) 3532 3533 3534Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 3531.400 kb on + strandat 3531.403 kb on - strandat 3531.409 kb on - strandat 3531.409 kb on - strandat 3531.411 kb on + strandat 3531.411 kb on + strandat 3531.411 kb on + strandat 3531.414 kb on - strandat 3531.414 kb on - strandat 3531.419 kb on - strandat 3531.419 kb on - strandat 3531.419 kb on - strandat 3531.419 kb on - strandat 3531.419 kb on - strandat 3531.419 kb on - strandat 3531.419 kb on - strandat 3531.419 kb on - strandat 3531.419 kb on - strandat 3531.419 kb on - strandat 3531.419 kb on - strandat 3531.419 kb on - strandat 3531.419 kb on - strandat 3531.419 kb on - strandat 3531.419 kb on - strandat 3531.419 kb on - strandat 3531.419 kb on - strandat 3531.419 kb on - strandat 3531.424 kb on - strandat 3531.458 kb on - strandat 3531.476 kb on - strandat 3531.479 kb on + strandat 3531.541 kb on - strand, within BWI76_RS17025at 3531.543 kb on + strand, within BWI76_RS17025at 3531.551 kb on - strand, within BWI76_RS17025at 3531.556 kb on - strand, within BWI76_RS17025at 3531.561 kb on - strand, within BWI76_RS17025at 3531.563 kb on - strand, within BWI76_RS17025at 3531.583 kb on - strand, within BWI76_RS17025at 3531.586 kb on - strand, within BWI76_RS17025at 3531.586 kb on - strand, within BWI76_RS17025at 3531.589 kb on + strand, within BWI76_RS17025at 3531.597 kb on - strand, within BWI76_RS17025at 3531.597 kb on - strandat 3531.602 kb on - strandat 3531.675 kb on - strand, within BWI76_RS17025at 3531.714 kb on - strand, within BWI76_RS17025at 3531.714 kb on - strand, within BWI76_RS17025at 3531.724 kb on - strand, within BWI76_RS17025at 3531.979 kb on - strandat 3531.979 kb on - strandat 3532.003 kb on - strandat 3532.025 kb on - strandat 3532.069 kb on - strandat 3532.081 kb on - strandat 3532.084 kb on - strandat 3532.105 kb on - strandat 3532.105 kb on - strandat 3532.105 kb on - strandat 3532.395 kb on + strandat 3532.452 kb on + strandat 3532.462 kb on - strandat 3532.580 kb on + strand, within BWI76_RS17030at 3532.585 kb on + strand, within BWI76_RS17030at 3532.595 kb on + strand, within BWI76_RS17030at 3532.595 kb on + strand, within BWI76_RS17030at 3532.669 kb on + strand, within BWI76_RS17030at 3532.669 kb on + strand, within BWI76_RS17030at 3532.697 kb on + strand, within BWI76_RS17030at 3532.705 kb on - strand, within BWI76_RS17030at 3532.740 kb on - strand, within BWI76_RS17030at 3532.759 kb on + strand, within BWI76_RS17030at 3532.792 kb on + strand, within BWI76_RS17030at 3532.792 kb on + strand, within BWI76_RS17030at 3532.792 kb on + strand, within BWI76_RS17030at 3532.803 kb on + strand, within BWI76_RS17030at 3532.810 kb on + strand, within BWI76_RS17030at 3532.812 kb on + strand, within BWI76_RS17030at 3532.820 kb on - strand, within BWI76_RS17030at 3532.820 kb on - strand, within BWI76_RS17030at 3532.863 kb on + strand, within BWI76_RS17030at 3532.925 kb on + strand, within BWI76_RS17030at 3532.931 kb on + strand, within BWI76_RS17030at 3532.971 kb on + strand, within BWI76_RS17030at 3532.992 kb on - strand, within BWI76_RS17030at 3532.992 kb on - strand, within BWI76_RS17030at 3532.999 kb on + strandat 3533.017 kb on + strandat 3533.072 kb on + strandat 3533.072 kb on + strandat 3533.079 kb on + strandat 3533.082 kb on + strandat 3533.094 kb on + strandat 3533.094 kb on + strandat 3533.102 kb on - strandat 3533.102 kb on - strandat 3533.102 kb on - strandat 3533.102 kb on - strandat 3533.102 kb on - strandat 3533.110 kb on + strandat 3533.159 kb on - strandat 3533.171 kb on + strandat 3533.179 kb on - strandat 3533.204 kb on + strand, within BWI76_RS17035at 3533.209 kb on + strand, within BWI76_RS17035at 3533.214 kb on + strand, within BWI76_RS17035at 3533.214 kb on + strand, within BWI76_RS17035at 3533.214 kb on + strand, within BWI76_RS17035at 3533.214 kb on + strandat 3533.214 kb on + strand, within BWI76_RS17035at 3533.215 kb on - strand, within BWI76_RS17035at 3533.215 kb on - strand, within BWI76_RS17035at 3533.217 kb on + strand, within BWI76_RS17035at 3533.219 kb on + strand, within BWI76_RS17035at 3533.219 kb on + strand, within BWI76_RS17035at 3533.219 kb on + strand, within BWI76_RS17035at 3533.219 kb on + strand, within BWI76_RS17035at 3533.219 kb on + strand, within BWI76_RS17035at 3533.219 kb on + strandat 3533.219 kb on + strand, within BWI76_RS17035at 3533.219 kb on + strand, within BWI76_RS17035at 3533.219 kb on + strand, within BWI76_RS17035at 3533.219 kb on + strand, within BWI76_RS17035at 3533.219 kb on + strand, within BWI76_RS17035at 3533.219 kb on + strand, within BWI76_RS17035at 3533.219 kb on + strand, within BWI76_RS17035at 3533.219 kb on + strand, within BWI76_RS17035at 3533.219 kb on + strand, within BWI76_RS17035at 3533.219 kb on + strand, within BWI76_RS17035at 3533.219 kb on + strand, within BWI76_RS17035at 3533.219 kb on + strand, within BWI76_RS17035at 3533.219 kb on + strand, within BWI76_RS17035at 3533.219 kb on + strand, within BWI76_RS17035at 3533.219 kb on + strand, within BWI76_RS17035at 3533.222 kb on - strand, within BWI76_RS17035at 3533.222 kb on - strand, within BWI76_RS17035at 3533.222 kb on - strand, within BWI76_RS17035at 3533.222 kb on - strand, within BWI76_RS17035at 3533.224 kb on + strand, within BWI76_RS17035at 3533.224 kb on + strand, within BWI76_RS17035at 3533.224 kb on + strand, within BWI76_RS17035at 3533.224 kb on + strand, within BWI76_RS17035at 3533.224 kb on + strand, within BWI76_RS17035at 3533.224 kb on + strand, within BWI76_RS17035at 3533.224 kb on + strand, within BWI76_RS17035at 3533.224 kb on + strand, within BWI76_RS17035at 3533.224 kb on + strand, within BWI76_RS17035at 3533.224 kb on + strand, within BWI76_RS17035at 3533.224 kb on + strand, within BWI76_RS17035at 3533.224 kb on + strand, within BWI76_RS17035at 3533.224 kb on + strand, within BWI76_RS17035at 3533.224 kb on + strand, within BWI76_RS17035at 3533.224 kb on + strand, within BWI76_RS17035at 3533.224 kb on + strand, within BWI76_RS17035at 3533.224 kb on + strand, within BWI76_RS17035at 3533.224 kb on + strand, within BWI76_RS17035at 3533.225 kb on - strand, within BWI76_RS17035at 3533.225 kb on - strand, within BWI76_RS17035at 3533.225 kb on - strand, within BWI76_RS17035at 3533.225 kb on - strandat 3533.227 kb on - strand, within BWI76_RS17035at 3533.227 kb on - strand, within BWI76_RS17035at 3533.232 kb on - strand, within BWI76_RS17035at 3533.232 kb on - strand, within BWI76_RS17035at 3533.232 kb on - strand, within BWI76_RS17035at 3533.232 kb on - strand, within BWI76_RS17035at 3533.232 kb on - strand, within BWI76_RS17035at 3533.232 kb on - strand, within BWI76_RS17035at 3533.255 kb on + strand, within BWI76_RS17035at 3533.255 kb on + strand, within BWI76_RS17035at 3533.255 kb on + strand, within BWI76_RS17035at 3533.261 kb on + strand, within BWI76_RS17035at 3533.262 kb on + strand, within BWI76_RS17035at 3533.263 kb on - strand, within BWI76_RS17035at 3533.268 kb on + strand, within BWI76_RS17035at 3533.268 kb on + strand, within BWI76_RS17035at 3533.281 kb on - strand, within BWI76_RS17035at 3533.294 kb on + strandat 3533.309 kb on - strand, within BWI76_RS17035at 3533.309 kb on - strand, within BWI76_RS17035at 3533.309 kb on - strand, within BWI76_RS17035at 3533.350 kb on - strand, within BWI76_RS17035at 3533.365 kb on + strand, within BWI76_RS17035at 3533.365 kb on + strand, within BWI76_RS17035at 3533.373 kb on - strand, within BWI76_RS17035at 3533.498 kb on + strand, within BWI76_RS17035at 3533.545 kb on - strandat 3533.577 kb on + strand, within BWI76_RS17035at 3533.582 kb on + strand, within BWI76_RS17035at 3533.582 kb on + strand, within BWI76_RS17035at 3533.595 kb on - strand, within BWI76_RS17035at 3533.691 kb on + strand, within BWI76_RS17035at 3533.762 kb on + strandat 3533.783 kb on + strandat 3533.820 kb on - strandat 3533.885 kb on + strandat 3533.898 kb on - strandat 3533.903 kb on + strandat 3533.971 kb on - strandat 3533.972 kb on - strandat 3533.974 kb on + strandat 3533.974 kb on + strandat 3533.974 kb on + strandat 3533.979 kb on + strandat 3533.982 kb on - strandat 3533.982 kb on - strandat 3533.987 kb on - strandat 3533.987 kb on - strandat 3533.987 kb on - strandat 3533.987 kb on - strandat 3533.999 kb on + strandat 3534.025 kb on + strandat 3534.026 kb on - strandat 3534.026 kb on - strandat 3534.054 kb on + strandat 3534.054 kb on + strandat 3534.056 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Asparagine (N)
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3,531,400 + -0.8
3,531,403 - -0.9
3,531,409 - -1.3
3,531,409 - -0.5
3,531,411 + +0.2
3,531,411 + -1.2
3,531,411 + +2.8
3,531,414 - -0.2
3,531,414 - -2.1
3,531,419 - -0.0
3,531,419 - +0.2
3,531,419 - -1.0
3,531,419 - -0.0
3,531,419 - -0.2
3,531,419 - -1.2
3,531,419 - +0.4
3,531,419 - +0.4
3,531,419 - +0.6
3,531,419 - -0.4
3,531,419 - -1.1
3,531,419 - +0.1
3,531,419 - +0.3
3,531,419 - +2.1
3,531,419 - +0.1
3,531,419 - -0.7
3,531,419 - -1.3
3,531,419 - +0.3
3,531,424 - +0.3
3,531,458 - -0.5
3,531,476 - +0.6
3,531,479 + -1.6
3,531,541 - BWI76_RS17025 0.20 -1.5
3,531,543 + BWI76_RS17025 0.20 -1.0
3,531,551 - BWI76_RS17025 0.21 +1.0
3,531,556 - BWI76_RS17025 0.22 -0.2
3,531,561 - BWI76_RS17025 0.23 -1.8
3,531,563 - BWI76_RS17025 0.24 +1.6
3,531,583 - BWI76_RS17025 0.27 +0.5
3,531,586 - BWI76_RS17025 0.28 +1.8
3,531,586 - BWI76_RS17025 0.28 +1.7
3,531,589 + BWI76_RS17025 0.29 -1.9
3,531,597 - BWI76_RS17025 0.30 +0.0
3,531,597 - +0.2
3,531,602 - +0.2
3,531,675 - BWI76_RS17025 0.45 -0.6
3,531,714 - BWI76_RS17025 0.52 -0.1
3,531,714 - BWI76_RS17025 0.52 -0.1
3,531,724 - BWI76_RS17025 0.54 +0.8
3,531,979 - +0.1
3,531,979 - -1.6
3,532,003 - -0.8
3,532,025 - +0.2
3,532,069 - -0.8
3,532,081 - +0.7
3,532,084 - -0.8
3,532,105 - +1.2
3,532,105 - -2.4
3,532,105 - +0.0
3,532,395 + -1.2
3,532,452 + -1.0
3,532,462 - +0.1
3,532,580 + BWI76_RS17030 0.27 -1.6
3,532,585 + BWI76_RS17030 0.28 +1.4
3,532,595 + BWI76_RS17030 0.30 -1.9
3,532,595 + BWI76_RS17030 0.30 -0.2
3,532,669 + BWI76_RS17030 0.41 +0.5
3,532,669 + BWI76_RS17030 0.41 -1.9
3,532,697 + BWI76_RS17030 0.45 -0.5
3,532,705 - BWI76_RS17030 0.46 -1.2
3,532,740 - BWI76_RS17030 0.52 -1.7
3,532,759 + BWI76_RS17030 0.54 -0.3
3,532,792 + BWI76_RS17030 0.59 -2.7
3,532,792 + BWI76_RS17030 0.59 -3.6
3,532,792 + BWI76_RS17030 0.59 -1.4
3,532,803 + BWI76_RS17030 0.61 -0.3
3,532,810 + BWI76_RS17030 0.62 -0.4
3,532,812 + BWI76_RS17030 0.62 -0.8
3,532,820 - BWI76_RS17030 0.64 -2.8
3,532,820 - BWI76_RS17030 0.64 +0.8
3,532,863 + BWI76_RS17030 0.70 -1.9
3,532,925 + BWI76_RS17030 0.80 -0.1
3,532,931 + BWI76_RS17030 0.80 -2.4
3,532,971 + BWI76_RS17030 0.87 -1.9
3,532,992 - BWI76_RS17030 0.90 +0.6
3,532,992 - BWI76_RS17030 0.90 +0.8
3,532,999 + +1.2
3,533,017 + -0.4
3,533,072 + +0.6
3,533,072 + +1.1
3,533,079 + +0.0
3,533,082 + -0.2
3,533,094 + +0.2
3,533,094 + -1.2
3,533,102 - +1.6
3,533,102 - +1.2
3,533,102 - -0.5
3,533,102 - -0.0
3,533,102 - -0.4
3,533,110 + +0.1
3,533,159 - -1.6
3,533,171 + +0.8
3,533,179 - -1.1
3,533,204 + BWI76_RS17035 0.10 -1.2
3,533,209 + BWI76_RS17035 0.11 -0.9
3,533,214 + BWI76_RS17035 0.12 -0.0
3,533,214 + BWI76_RS17035 0.12 -1.4
3,533,214 + BWI76_RS17035 0.12 +1.5
3,533,214 + -1.0
3,533,214 + BWI76_RS17035 0.12 +0.1
3,533,215 - BWI76_RS17035 0.12 +1.7
3,533,215 - BWI76_RS17035 0.12 -1.6
3,533,217 + BWI76_RS17035 0.12 +0.4
3,533,219 + BWI76_RS17035 0.13 -0.8
3,533,219 + BWI76_RS17035 0.13 -2.2
3,533,219 + BWI76_RS17035 0.13 -1.6
3,533,219 + BWI76_RS17035 0.13 -1.9
3,533,219 + BWI76_RS17035 0.13 +1.2
3,533,219 + -0.2
3,533,219 + BWI76_RS17035 0.13 +0.2
3,533,219 + BWI76_RS17035 0.13 +0.8
3,533,219 + BWI76_RS17035 0.13 -1.8
3,533,219 + BWI76_RS17035 0.13 -1.2
3,533,219 + BWI76_RS17035 0.13 -0.9
3,533,219 + BWI76_RS17035 0.13 +0.2
3,533,219 + BWI76_RS17035 0.13 +1.4
3,533,219 + BWI76_RS17035 0.13 -1.9
3,533,219 + BWI76_RS17035 0.13 +0.9
3,533,219 + BWI76_RS17035 0.13 -0.5
3,533,219 + BWI76_RS17035 0.13 -2.3
3,533,219 + BWI76_RS17035 0.13 -0.5
3,533,219 + BWI76_RS17035 0.13 -0.5
3,533,219 + BWI76_RS17035 0.13 +0.7
3,533,219 + BWI76_RS17035 0.13 -1.6
3,533,222 - BWI76_RS17035 0.13 -0.6
3,533,222 - BWI76_RS17035 0.13 +0.2
3,533,222 - BWI76_RS17035 0.13 +0.8
3,533,222 - BWI76_RS17035 0.13 +0.2
3,533,224 + BWI76_RS17035 0.13 -1.7
3,533,224 + BWI76_RS17035 0.13 -0.5
3,533,224 + BWI76_RS17035 0.13 +0.2
3,533,224 + BWI76_RS17035 0.13 -1.2
3,533,224 + BWI76_RS17035 0.13 +0.7
3,533,224 + BWI76_RS17035 0.13 +1.1
3,533,224 + BWI76_RS17035 0.13 -1.6
3,533,224 + BWI76_RS17035 0.13 +0.0
3,533,224 + BWI76_RS17035 0.13 -1.0
3,533,224 + BWI76_RS17035 0.13 +0.7
3,533,224 + BWI76_RS17035 0.13 -0.2
3,533,224 + BWI76_RS17035 0.13 -0.3
3,533,224 + BWI76_RS17035 0.13 -2.8
3,533,224 + BWI76_RS17035 0.13 +0.6
3,533,224 + BWI76_RS17035 0.13 -1.6
3,533,224 + BWI76_RS17035 0.13 +0.8
3,533,224 + BWI76_RS17035 0.13 -1.8
3,533,224 + BWI76_RS17035 0.13 +0.6
3,533,225 - BWI76_RS17035 0.14 -0.4
3,533,225 - BWI76_RS17035 0.14 -0.7
3,533,225 - BWI76_RS17035 0.14 -1.2
3,533,225 - -0.2
3,533,227 - BWI76_RS17035 0.14 +0.5
3,533,227 - BWI76_RS17035 0.14 +0.5
3,533,232 - BWI76_RS17035 0.15 +1.0
3,533,232 - BWI76_RS17035 0.15 -1.2
3,533,232 - BWI76_RS17035 0.15 +0.7
3,533,232 - BWI76_RS17035 0.15 -0.5
3,533,232 - BWI76_RS17035 0.15 -0.2
3,533,232 - BWI76_RS17035 0.15 -0.2
3,533,255 + BWI76_RS17035 0.18 -1.8
3,533,255 + BWI76_RS17035 0.18 +0.6
3,533,255 + BWI76_RS17035 0.18 +0.6
3,533,261 + BWI76_RS17035 0.19 +0.2
3,533,262 + BWI76_RS17035 0.20 -1.6
3,533,263 - BWI76_RS17035 0.20 +1.8
3,533,268 + BWI76_RS17035 0.20 -0.2
3,533,268 + BWI76_RS17035 0.20 -1.9
3,533,281 - BWI76_RS17035 0.23 -3.3
3,533,294 + +0.2
3,533,309 - BWI76_RS17035 0.27 -2.3
3,533,309 - BWI76_RS17035 0.27 +1.8
3,533,309 - BWI76_RS17035 0.27 -0.3
3,533,350 - BWI76_RS17035 0.33 +0.2
3,533,365 + BWI76_RS17035 0.36 -1.1
3,533,365 + BWI76_RS17035 0.36 -0.5
3,533,373 - BWI76_RS17035 0.37 -1.0
3,533,498 + BWI76_RS17035 0.57 -0.7
3,533,545 - +2.2
3,533,577 + BWI76_RS17035 0.70 +0.5
3,533,582 + BWI76_RS17035 0.70 +1.5
3,533,582 + BWI76_RS17035 0.70 +1.7
3,533,595 - BWI76_RS17035 0.72 +0.1
3,533,691 + BWI76_RS17035 0.88 +0.1
3,533,762 + +0.2
3,533,783 + -0.2
3,533,820 - -0.5
3,533,885 + -0.7
3,533,898 - +0.1
3,533,903 + -0.4
3,533,971 - -1.5
3,533,972 - -0.5
3,533,974 + -0.5
3,533,974 + +0.5
3,533,974 + +1.6
3,533,979 + +0.5
3,533,982 - -0.9
3,533,982 - -2.3
3,533,987 - -2.9
3,533,987 - -1.8
3,533,987 - +0.2
3,533,987 - +1.1
3,533,999 + -0.1
3,534,025 + +0.1
3,534,026 - -2.0
3,534,026 - -1.8
3,534,054 + -1.3
3,534,054 + -0.1
3,534,056 + +1.4

Or see this region's nucleotide sequence