Experiment: L-Asparagine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS17025 and BWI76_RS17030 are separated by 432 nucleotides BWI76_RS17030 and BWI76_RS17035 are separated by 79 nucleotides
BWI76_RS17025: BWI76_RS17025 - putative major type 1 subunit fimbrin, at 3,531,437 to 3,531,967
_RS17025
BWI76_RS17030: BWI76_RS17030 - cyclic nucleotide-binding domain-containing protein, at 3,532,400 to 3,533,059
_RS17030
BWI76_RS17035: BWI76_RS17035 - Crp/Fnr family transcriptional regulator, at 3,533,139 to 3,533,768
_RS17035
Position (kb)
3532
3533
3534 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3531.400 kb on + strand at 3531.403 kb on - strand at 3531.409 kb on - strand at 3531.409 kb on - strand at 3531.411 kb on + strand at 3531.411 kb on + strand at 3531.411 kb on + strand at 3531.414 kb on - strand at 3531.414 kb on - strand at 3531.419 kb on - strand at 3531.419 kb on - strand at 3531.419 kb on - strand at 3531.419 kb on - strand at 3531.419 kb on - strand at 3531.419 kb on - strand at 3531.419 kb on - strand at 3531.419 kb on - strand at 3531.419 kb on - strand at 3531.419 kb on - strand at 3531.419 kb on - strand at 3531.419 kb on - strand at 3531.419 kb on - strand at 3531.419 kb on - strand at 3531.419 kb on - strand at 3531.419 kb on - strand at 3531.419 kb on - strand at 3531.419 kb on - strand at 3531.424 kb on - strand at 3531.458 kb on - strand at 3531.476 kb on - strand at 3531.479 kb on + strand at 3531.541 kb on - strand, within BWI76_RS17025 at 3531.543 kb on + strand, within BWI76_RS17025 at 3531.551 kb on - strand, within BWI76_RS17025 at 3531.556 kb on - strand, within BWI76_RS17025 at 3531.561 kb on - strand, within BWI76_RS17025 at 3531.563 kb on - strand, within BWI76_RS17025 at 3531.583 kb on - strand, within BWI76_RS17025 at 3531.586 kb on - strand, within BWI76_RS17025 at 3531.586 kb on - strand, within BWI76_RS17025 at 3531.589 kb on + strand, within BWI76_RS17025 at 3531.597 kb on - strand, within BWI76_RS17025 at 3531.597 kb on - strand at 3531.602 kb on - strand at 3531.675 kb on - strand, within BWI76_RS17025 at 3531.714 kb on - strand, within BWI76_RS17025 at 3531.714 kb on - strand, within BWI76_RS17025 at 3531.724 kb on - strand, within BWI76_RS17025 at 3531.979 kb on - strand at 3531.979 kb on - strand at 3532.003 kb on - strand at 3532.025 kb on - strand at 3532.069 kb on - strand at 3532.081 kb on - strand at 3532.084 kb on - strand at 3532.105 kb on - strand at 3532.105 kb on - strand at 3532.105 kb on - strand at 3532.395 kb on + strand at 3532.452 kb on + strand at 3532.462 kb on - strand at 3532.580 kb on + strand, within BWI76_RS17030 at 3532.585 kb on + strand, within BWI76_RS17030 at 3532.595 kb on + strand, within BWI76_RS17030 at 3532.595 kb on + strand, within BWI76_RS17030 at 3532.669 kb on + strand, within BWI76_RS17030 at 3532.669 kb on + strand, within BWI76_RS17030 at 3532.697 kb on + strand, within BWI76_RS17030 at 3532.705 kb on - strand, within BWI76_RS17030 at 3532.740 kb on - strand, within BWI76_RS17030 at 3532.759 kb on + strand, within BWI76_RS17030 at 3532.792 kb on + strand, within BWI76_RS17030 at 3532.792 kb on + strand, within BWI76_RS17030 at 3532.792 kb on + strand, within BWI76_RS17030 at 3532.803 kb on + strand, within BWI76_RS17030 at 3532.810 kb on + strand, within BWI76_RS17030 at 3532.812 kb on + strand, within BWI76_RS17030 at 3532.820 kb on - strand, within BWI76_RS17030 at 3532.820 kb on - strand, within BWI76_RS17030 at 3532.863 kb on + strand, within BWI76_RS17030 at 3532.925 kb on + strand, within BWI76_RS17030 at 3532.931 kb on + strand, within BWI76_RS17030 at 3532.971 kb on + strand, within BWI76_RS17030 at 3532.992 kb on - strand, within BWI76_RS17030 at 3532.992 kb on - strand, within BWI76_RS17030 at 3532.999 kb on + strand at 3533.017 kb on + strand at 3533.072 kb on + strand at 3533.072 kb on + strand at 3533.079 kb on + strand at 3533.082 kb on + strand at 3533.094 kb on + strand at 3533.094 kb on + strand at 3533.102 kb on - strand at 3533.102 kb on - strand at 3533.102 kb on - strand at 3533.102 kb on - strand at 3533.102 kb on - strand at 3533.110 kb on + strand at 3533.159 kb on - strand at 3533.171 kb on + strand at 3533.179 kb on - strand at 3533.204 kb on + strand, within BWI76_RS17035 at 3533.209 kb on + strand, within BWI76_RS17035 at 3533.214 kb on + strand, within BWI76_RS17035 at 3533.214 kb on + strand, within BWI76_RS17035 at 3533.214 kb on + strand, within BWI76_RS17035 at 3533.214 kb on + strand at 3533.214 kb on + strand, within BWI76_RS17035 at 3533.215 kb on - strand, within BWI76_RS17035 at 3533.215 kb on - strand, within BWI76_RS17035 at 3533.217 kb on + strand, within BWI76_RS17035 at 3533.219 kb on + strand, within BWI76_RS17035 at 3533.219 kb on + strand, within BWI76_RS17035 at 3533.219 kb on + strand, within BWI76_RS17035 at 3533.219 kb on + strand, within BWI76_RS17035 at 3533.219 kb on + strand, within BWI76_RS17035 at 3533.219 kb on + strand at 3533.219 kb on + strand, within BWI76_RS17035 at 3533.219 kb on + strand, within BWI76_RS17035 at 3533.219 kb on + strand, within BWI76_RS17035 at 3533.219 kb on + strand, within BWI76_RS17035 at 3533.219 kb on + strand, within BWI76_RS17035 at 3533.219 kb on + strand, within BWI76_RS17035 at 3533.219 kb on + strand, within BWI76_RS17035 at 3533.219 kb on + strand, within BWI76_RS17035 at 3533.219 kb on + strand, within BWI76_RS17035 at 3533.219 kb on + strand, within BWI76_RS17035 at 3533.219 kb on + strand, within BWI76_RS17035 at 3533.219 kb on + strand, within BWI76_RS17035 at 3533.219 kb on + strand, within BWI76_RS17035 at 3533.219 kb on + strand, within BWI76_RS17035 at 3533.219 kb on + strand, within BWI76_RS17035 at 3533.222 kb on - strand, within BWI76_RS17035 at 3533.222 kb on - strand, within BWI76_RS17035 at 3533.222 kb on - strand, within BWI76_RS17035 at 3533.222 kb on - strand, within BWI76_RS17035 at 3533.224 kb on + strand, within BWI76_RS17035 at 3533.224 kb on + strand, within BWI76_RS17035 at 3533.224 kb on + strand, within BWI76_RS17035 at 3533.224 kb on + strand, within BWI76_RS17035 at 3533.224 kb on + strand, within BWI76_RS17035 at 3533.224 kb on + strand, within BWI76_RS17035 at 3533.224 kb on + strand, within BWI76_RS17035 at 3533.224 kb on + strand, within BWI76_RS17035 at 3533.224 kb on + strand, within BWI76_RS17035 at 3533.224 kb on + strand, within BWI76_RS17035 at 3533.224 kb on + strand, within BWI76_RS17035 at 3533.224 kb on + strand, within BWI76_RS17035 at 3533.224 kb on + strand, within BWI76_RS17035 at 3533.224 kb on + strand, within BWI76_RS17035 at 3533.224 kb on + strand, within BWI76_RS17035 at 3533.224 kb on + strand, within BWI76_RS17035 at 3533.224 kb on + strand, within BWI76_RS17035 at 3533.224 kb on + strand, within BWI76_RS17035 at 3533.225 kb on - strand, within BWI76_RS17035 at 3533.225 kb on - strand, within BWI76_RS17035 at 3533.225 kb on - strand, within BWI76_RS17035 at 3533.225 kb on - strand at 3533.227 kb on - strand, within BWI76_RS17035 at 3533.227 kb on - strand, within BWI76_RS17035 at 3533.232 kb on - strand, within BWI76_RS17035 at 3533.232 kb on - strand, within BWI76_RS17035 at 3533.232 kb on - strand, within BWI76_RS17035 at 3533.232 kb on - strand, within BWI76_RS17035 at 3533.232 kb on - strand, within BWI76_RS17035 at 3533.232 kb on - strand, within BWI76_RS17035 at 3533.255 kb on + strand, within BWI76_RS17035 at 3533.255 kb on + strand, within BWI76_RS17035 at 3533.255 kb on + strand, within BWI76_RS17035 at 3533.261 kb on + strand, within BWI76_RS17035 at 3533.262 kb on + strand, within BWI76_RS17035 at 3533.263 kb on - strand, within BWI76_RS17035 at 3533.268 kb on + strand, within BWI76_RS17035 at 3533.268 kb on + strand, within BWI76_RS17035 at 3533.281 kb on - strand, within BWI76_RS17035 at 3533.294 kb on + strand at 3533.309 kb on - strand, within BWI76_RS17035 at 3533.309 kb on - strand, within BWI76_RS17035 at 3533.309 kb on - strand, within BWI76_RS17035 at 3533.350 kb on - strand, within BWI76_RS17035 at 3533.365 kb on + strand, within BWI76_RS17035 at 3533.365 kb on + strand, within BWI76_RS17035 at 3533.373 kb on - strand, within BWI76_RS17035 at 3533.498 kb on + strand, within BWI76_RS17035 at 3533.545 kb on - strand at 3533.577 kb on + strand, within BWI76_RS17035 at 3533.582 kb on + strand, within BWI76_RS17035 at 3533.582 kb on + strand, within BWI76_RS17035 at 3533.595 kb on - strand, within BWI76_RS17035 at 3533.691 kb on + strand, within BWI76_RS17035 at 3533.762 kb on + strand at 3533.783 kb on + strand at 3533.820 kb on - strand at 3533.885 kb on + strand at 3533.898 kb on - strand at 3533.903 kb on + strand at 3533.971 kb on - strand at 3533.972 kb on - strand at 3533.974 kb on + strand at 3533.974 kb on + strand at 3533.974 kb on + strand at 3533.979 kb on + strand at 3533.982 kb on - strand at 3533.982 kb on - strand at 3533.987 kb on - strand at 3533.987 kb on - strand at 3533.987 kb on - strand at 3533.987 kb on - strand at 3533.999 kb on + strand at 3534.025 kb on + strand at 3534.026 kb on - strand at 3534.026 kb on - strand at 3534.054 kb on + strand at 3534.054 kb on + strand at 3534.056 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Asparagine (N) remove 3,531,400 + -0.8 3,531,403 - -0.9 3,531,409 - -1.3 3,531,409 - -0.5 3,531,411 + +0.2 3,531,411 + -1.2 3,531,411 + +2.8 3,531,414 - -0.2 3,531,414 - -2.1 3,531,419 - -0.0 3,531,419 - +0.2 3,531,419 - -1.0 3,531,419 - -0.0 3,531,419 - -0.2 3,531,419 - -1.2 3,531,419 - +0.4 3,531,419 - +0.4 3,531,419 - +0.6 3,531,419 - -0.4 3,531,419 - -1.1 3,531,419 - +0.1 3,531,419 - +0.3 3,531,419 - +2.1 3,531,419 - +0.1 3,531,419 - -0.7 3,531,419 - -1.3 3,531,419 - +0.3 3,531,424 - +0.3 3,531,458 - -0.5 3,531,476 - +0.6 3,531,479 + -1.6 3,531,541 - BWI76_RS17025 0.20 -1.5 3,531,543 + BWI76_RS17025 0.20 -1.0 3,531,551 - BWI76_RS17025 0.21 +1.0 3,531,556 - BWI76_RS17025 0.22 -0.2 3,531,561 - BWI76_RS17025 0.23 -1.8 3,531,563 - BWI76_RS17025 0.24 +1.6 3,531,583 - BWI76_RS17025 0.27 +0.5 3,531,586 - BWI76_RS17025 0.28 +1.8 3,531,586 - BWI76_RS17025 0.28 +1.7 3,531,589 + BWI76_RS17025 0.29 -1.9 3,531,597 - BWI76_RS17025 0.30 +0.0 3,531,597 - +0.2 3,531,602 - +0.2 3,531,675 - BWI76_RS17025 0.45 -0.6 3,531,714 - BWI76_RS17025 0.52 -0.1 3,531,714 - BWI76_RS17025 0.52 -0.1 3,531,724 - BWI76_RS17025 0.54 +0.8 3,531,979 - +0.1 3,531,979 - -1.6 3,532,003 - -0.8 3,532,025 - +0.2 3,532,069 - -0.8 3,532,081 - +0.7 3,532,084 - -0.8 3,532,105 - +1.2 3,532,105 - -2.4 3,532,105 - +0.0 3,532,395 + -1.2 3,532,452 + -1.0 3,532,462 - +0.1 3,532,580 + BWI76_RS17030 0.27 -1.6 3,532,585 + BWI76_RS17030 0.28 +1.4 3,532,595 + BWI76_RS17030 0.30 -1.9 3,532,595 + BWI76_RS17030 0.30 -0.2 3,532,669 + BWI76_RS17030 0.41 +0.5 3,532,669 + BWI76_RS17030 0.41 -1.9 3,532,697 + BWI76_RS17030 0.45 -0.5 3,532,705 - BWI76_RS17030 0.46 -1.2 3,532,740 - BWI76_RS17030 0.52 -1.7 3,532,759 + BWI76_RS17030 0.54 -0.3 3,532,792 + BWI76_RS17030 0.59 -2.7 3,532,792 + BWI76_RS17030 0.59 -3.6 3,532,792 + BWI76_RS17030 0.59 -1.4 3,532,803 + BWI76_RS17030 0.61 -0.3 3,532,810 + BWI76_RS17030 0.62 -0.4 3,532,812 + BWI76_RS17030 0.62 -0.8 3,532,820 - BWI76_RS17030 0.64 -2.8 3,532,820 - BWI76_RS17030 0.64 +0.8 3,532,863 + BWI76_RS17030 0.70 -1.9 3,532,925 + BWI76_RS17030 0.80 -0.1 3,532,931 + BWI76_RS17030 0.80 -2.4 3,532,971 + BWI76_RS17030 0.87 -1.9 3,532,992 - BWI76_RS17030 0.90 +0.6 3,532,992 - BWI76_RS17030 0.90 +0.8 3,532,999 + +1.2 3,533,017 + -0.4 3,533,072 + +0.6 3,533,072 + +1.1 3,533,079 + +0.0 3,533,082 + -0.2 3,533,094 + +0.2 3,533,094 + -1.2 3,533,102 - +1.6 3,533,102 - +1.2 3,533,102 - -0.5 3,533,102 - -0.0 3,533,102 - -0.4 3,533,110 + +0.1 3,533,159 - -1.6 3,533,171 + +0.8 3,533,179 - -1.1 3,533,204 + BWI76_RS17035 0.10 -1.2 3,533,209 + BWI76_RS17035 0.11 -0.9 3,533,214 + BWI76_RS17035 0.12 -0.0 3,533,214 + BWI76_RS17035 0.12 -1.4 3,533,214 + BWI76_RS17035 0.12 +1.5 3,533,214 + -1.0 3,533,214 + BWI76_RS17035 0.12 +0.1 3,533,215 - BWI76_RS17035 0.12 +1.7 3,533,215 - BWI76_RS17035 0.12 -1.6 3,533,217 + BWI76_RS17035 0.12 +0.4 3,533,219 + BWI76_RS17035 0.13 -0.8 3,533,219 + BWI76_RS17035 0.13 -2.2 3,533,219 + BWI76_RS17035 0.13 -1.6 3,533,219 + BWI76_RS17035 0.13 -1.9 3,533,219 + BWI76_RS17035 0.13 +1.2 3,533,219 + -0.2 3,533,219 + BWI76_RS17035 0.13 +0.2 3,533,219 + BWI76_RS17035 0.13 +0.8 3,533,219 + BWI76_RS17035 0.13 -1.8 3,533,219 + BWI76_RS17035 0.13 -1.2 3,533,219 + BWI76_RS17035 0.13 -0.9 3,533,219 + BWI76_RS17035 0.13 +0.2 3,533,219 + BWI76_RS17035 0.13 +1.4 3,533,219 + BWI76_RS17035 0.13 -1.9 3,533,219 + BWI76_RS17035 0.13 +0.9 3,533,219 + BWI76_RS17035 0.13 -0.5 3,533,219 + BWI76_RS17035 0.13 -2.3 3,533,219 + BWI76_RS17035 0.13 -0.5 3,533,219 + BWI76_RS17035 0.13 -0.5 3,533,219 + BWI76_RS17035 0.13 +0.7 3,533,219 + BWI76_RS17035 0.13 -1.6 3,533,222 - BWI76_RS17035 0.13 -0.6 3,533,222 - BWI76_RS17035 0.13 +0.2 3,533,222 - BWI76_RS17035 0.13 +0.8 3,533,222 - BWI76_RS17035 0.13 +0.2 3,533,224 + BWI76_RS17035 0.13 -1.7 3,533,224 + BWI76_RS17035 0.13 -0.5 3,533,224 + BWI76_RS17035 0.13 +0.2 3,533,224 + BWI76_RS17035 0.13 -1.2 3,533,224 + BWI76_RS17035 0.13 +0.7 3,533,224 + BWI76_RS17035 0.13 +1.1 3,533,224 + BWI76_RS17035 0.13 -1.6 3,533,224 + BWI76_RS17035 0.13 +0.0 3,533,224 + BWI76_RS17035 0.13 -1.0 3,533,224 + BWI76_RS17035 0.13 +0.7 3,533,224 + BWI76_RS17035 0.13 -0.2 3,533,224 + BWI76_RS17035 0.13 -0.3 3,533,224 + BWI76_RS17035 0.13 -2.8 3,533,224 + BWI76_RS17035 0.13 +0.6 3,533,224 + BWI76_RS17035 0.13 -1.6 3,533,224 + BWI76_RS17035 0.13 +0.8 3,533,224 + BWI76_RS17035 0.13 -1.8 3,533,224 + BWI76_RS17035 0.13 +0.6 3,533,225 - BWI76_RS17035 0.14 -0.4 3,533,225 - BWI76_RS17035 0.14 -0.7 3,533,225 - BWI76_RS17035 0.14 -1.2 3,533,225 - -0.2 3,533,227 - BWI76_RS17035 0.14 +0.5 3,533,227 - BWI76_RS17035 0.14 +0.5 3,533,232 - BWI76_RS17035 0.15 +1.0 3,533,232 - BWI76_RS17035 0.15 -1.2 3,533,232 - BWI76_RS17035 0.15 +0.7 3,533,232 - BWI76_RS17035 0.15 -0.5 3,533,232 - BWI76_RS17035 0.15 -0.2 3,533,232 - BWI76_RS17035 0.15 -0.2 3,533,255 + BWI76_RS17035 0.18 -1.8 3,533,255 + BWI76_RS17035 0.18 +0.6 3,533,255 + BWI76_RS17035 0.18 +0.6 3,533,261 + BWI76_RS17035 0.19 +0.2 3,533,262 + BWI76_RS17035 0.20 -1.6 3,533,263 - BWI76_RS17035 0.20 +1.8 3,533,268 + BWI76_RS17035 0.20 -0.2 3,533,268 + BWI76_RS17035 0.20 -1.9 3,533,281 - BWI76_RS17035 0.23 -3.3 3,533,294 + +0.2 3,533,309 - BWI76_RS17035 0.27 -2.3 3,533,309 - BWI76_RS17035 0.27 +1.8 3,533,309 - BWI76_RS17035 0.27 -0.3 3,533,350 - BWI76_RS17035 0.33 +0.2 3,533,365 + BWI76_RS17035 0.36 -1.1 3,533,365 + BWI76_RS17035 0.36 -0.5 3,533,373 - BWI76_RS17035 0.37 -1.0 3,533,498 + BWI76_RS17035 0.57 -0.7 3,533,545 - +2.2 3,533,577 + BWI76_RS17035 0.70 +0.5 3,533,582 + BWI76_RS17035 0.70 +1.5 3,533,582 + BWI76_RS17035 0.70 +1.7 3,533,595 - BWI76_RS17035 0.72 +0.1 3,533,691 + BWI76_RS17035 0.88 +0.1 3,533,762 + +0.2 3,533,783 + -0.2 3,533,820 - -0.5 3,533,885 + -0.7 3,533,898 - +0.1 3,533,903 + -0.4 3,533,971 - -1.5 3,533,972 - -0.5 3,533,974 + -0.5 3,533,974 + +0.5 3,533,974 + +1.6 3,533,979 + +0.5 3,533,982 - -0.9 3,533,982 - -2.3 3,533,987 - -2.9 3,533,987 - -1.8 3,533,987 - +0.2 3,533,987 - +1.1 3,533,999 + -0.1 3,534,025 + +0.1 3,534,026 - -2.0 3,534,026 - -1.8 3,534,054 + -1.3 3,534,054 + -0.1 3,534,056 + +1.4
Or see this region's nucleotide sequence