Experiment: L-Asparagine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS13685 and BWI76_RS13690 are separated by 261 nucleotides BWI76_RS13690 and BWI76_RS13695 are separated by 12 nucleotides BWI76_RS13695 and BWI76_RS13700 are separated by 70 nucleotides
BWI76_RS13685: BWI76_RS13685 - IclR family transcriptional regulator, at 2,855,976 to 2,856,773
_RS13685
BWI76_RS13690: BWI76_RS13690 - muconate and chloromuconate cycloisomerase, at 2,857,035 to 2,858,153
_RS13690
BWI76_RS13695: BWI76_RS13695 - muconolactone delta-isomerase, at 2,858,166 to 2,858,456
_RS13695
BWI76_RS13700: BWI76_RS13700 - catechol 1,2-dioxygenase, at 2,858,527 to 2,859,453
_RS13700
Position (kb)
2857
2858
2859 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2856.585 kb on + strand, within BWI76_RS13685 at 2856.657 kb on - strand, within BWI76_RS13685 at 2857.252 kb on + strand at 2857.306 kb on + strand, within BWI76_RS13690 at 2857.314 kb on - strand, within BWI76_RS13690 at 2857.323 kb on + strand, within BWI76_RS13690 at 2857.379 kb on + strand, within BWI76_RS13690 at 2857.387 kb on - strand, within BWI76_RS13690 at 2857.387 kb on - strand, within BWI76_RS13690 at 2857.412 kb on + strand, within BWI76_RS13690 at 2857.457 kb on + strand, within BWI76_RS13690 at 2857.721 kb on + strand at 2857.729 kb on - strand, within BWI76_RS13690 at 2857.889 kb on + strand, within BWI76_RS13690 at 2857.978 kb on + strand, within BWI76_RS13690 at 2857.978 kb on + strand, within BWI76_RS13690 at 2857.978 kb on + strand, within BWI76_RS13690 at 2858.003 kb on - strand, within BWI76_RS13690 at 2858.022 kb on + strand, within BWI76_RS13690 at 2858.059 kb on + strand at 2858.067 kb on - strand at 2858.077 kb on - strand at 2858.082 kb on - strand at 2858.082 kb on - strand at 2858.100 kb on - strand at 2858.104 kb on + strand at 2858.104 kb on + strand at 2858.104 kb on + strand at 2858.104 kb on + strand at 2858.104 kb on + strand at 2858.104 kb on + strand at 2858.112 kb on - strand at 2858.112 kb on - strand at 2858.114 kb on + strand at 2858.115 kb on + strand at 2858.117 kb on - strand at 2858.122 kb on - strand at 2858.123 kb on - strand at 2858.123 kb on - strand at 2858.148 kb on + strand at 2858.148 kb on + strand at 2858.148 kb on + strand at 2858.156 kb on - strand at 2858.156 kb on - strand at 2858.156 kb on - strand at 2858.156 kb on - strand at 2858.156 kb on - strand at 2858.156 kb on - strand at 2858.156 kb on - strand at 2858.156 kb on - strand at 2858.167 kb on - strand at 2858.171 kb on + strand at 2858.179 kb on - strand at 2858.230 kb on + strand, within BWI76_RS13695 at 2858.238 kb on - strand, within BWI76_RS13695 at 2858.264 kb on + strand, within BWI76_RS13695 at 2858.270 kb on + strand, within BWI76_RS13695 at 2858.270 kb on + strand, within BWI76_RS13695 at 2858.278 kb on - strand, within BWI76_RS13695 at 2858.310 kb on + strand, within BWI76_RS13695 at 2858.419 kb on + strand, within BWI76_RS13695 at 2858.419 kb on + strand, within BWI76_RS13695 at 2858.419 kb on + strand, within BWI76_RS13695 at 2858.419 kb on + strand, within BWI76_RS13695 at 2858.419 kb on + strand, within BWI76_RS13695 at 2858.419 kb on + strand, within BWI76_RS13695 at 2858.419 kb on + strand, within BWI76_RS13695 at 2858.419 kb on + strand, within BWI76_RS13695 at 2858.419 kb on + strand at 2858.419 kb on + strand, within BWI76_RS13695 at 2858.419 kb on + strand, within BWI76_RS13695 at 2858.419 kb on + strand, within BWI76_RS13695 at 2858.419 kb on + strand, within BWI76_RS13695 at 2858.419 kb on + strand, within BWI76_RS13695 at 2858.419 kb on + strand, within BWI76_RS13695 at 2858.421 kb on + strand, within BWI76_RS13695 at 2858.421 kb on + strand, within BWI76_RS13695 at 2858.547 kb on + strand at 2858.547 kb on + strand at 2858.547 kb on + strand at 2858.547 kb on + strand at 2858.547 kb on + strand at 2858.547 kb on + strand at 2858.555 kb on - strand at 2858.645 kb on - strand, within BWI76_RS13700 at 2858.665 kb on + strand, within BWI76_RS13700 at 2858.678 kb on + strand, within BWI76_RS13700 at 2858.686 kb on + strand, within BWI76_RS13700 at 2858.688 kb on + strand, within BWI76_RS13700 at 2858.694 kb on - strand, within BWI76_RS13700 at 2858.696 kb on - strand, within BWI76_RS13700 at 2858.745 kb on + strand, within BWI76_RS13700 at 2858.762 kb on + strand, within BWI76_RS13700 at 2858.764 kb on - strand, within BWI76_RS13700 at 2858.772 kb on - strand, within BWI76_RS13700 at 2858.774 kb on + strand, within BWI76_RS13700 at 2858.782 kb on - strand, within BWI76_RS13700 at 2858.787 kb on - strand, within BWI76_RS13700 at 2858.882 kb on - strand, within BWI76_RS13700 at 2858.940 kb on + strand, within BWI76_RS13700 at 2858.950 kb on + strand, within BWI76_RS13700 at 2858.958 kb on - strand, within BWI76_RS13700 at 2858.996 kb on + strand, within BWI76_RS13700 at 2859.041 kb on + strand, within BWI76_RS13700 at 2859.049 kb on - strand, within BWI76_RS13700 at 2859.055 kb on - strand, within BWI76_RS13700 at 2859.056 kb on + strand, within BWI76_RS13700 at 2859.106 kb on - strand, within BWI76_RS13700 at 2859.106 kb on - strand, within BWI76_RS13700 at 2859.106 kb on - strand, within BWI76_RS13700
Per-strain Table
Position Strand Gene LocusTag Fraction L-Asparagine (N) remove 2,856,585 + BWI76_RS13685 0.76 +0.2 2,856,657 - BWI76_RS13685 0.85 -1.9 2,857,252 + +0.1 2,857,306 + BWI76_RS13690 0.24 +0.0 2,857,314 - BWI76_RS13690 0.25 -0.5 2,857,323 + BWI76_RS13690 0.26 +0.1 2,857,379 + BWI76_RS13690 0.31 +0.4 2,857,387 - BWI76_RS13690 0.31 -0.0 2,857,387 - BWI76_RS13690 0.31 +0.9 2,857,412 + BWI76_RS13690 0.34 +0.1 2,857,457 + BWI76_RS13690 0.38 -0.9 2,857,721 + +0.7 2,857,729 - BWI76_RS13690 0.62 +0.8 2,857,889 + BWI76_RS13690 0.76 -0.4 2,857,978 + BWI76_RS13690 0.84 -0.4 2,857,978 + BWI76_RS13690 0.84 +0.6 2,857,978 + BWI76_RS13690 0.84 +0.2 2,858,003 - BWI76_RS13690 0.87 -0.0 2,858,022 + BWI76_RS13690 0.88 +0.1 2,858,059 + +1.7 2,858,067 - +0.1 2,858,077 - +0.1 2,858,082 - +0.2 2,858,082 - +0.1 2,858,100 - -0.0 2,858,104 + +0.2 2,858,104 + -1.3 2,858,104 + +0.1 2,858,104 + -0.9 2,858,104 + +1.2 2,858,104 + -0.0 2,858,112 - -0.0 2,858,112 - -0.1 2,858,114 + +0.3 2,858,115 + +0.1 2,858,117 - -0.5 2,858,122 - -0.2 2,858,123 - -0.3 2,858,123 - +0.3 2,858,148 + -2.8 2,858,148 + +0.1 2,858,148 + +0.0 2,858,156 - -1.3 2,858,156 - -0.5 2,858,156 - +0.1 2,858,156 - -0.6 2,858,156 - -0.2 2,858,156 - -1.2 2,858,156 - -0.4 2,858,156 - +0.9 2,858,167 - +1.1 2,858,171 + +0.1 2,858,179 - -2.5 2,858,230 + BWI76_RS13695 0.22 +0.6 2,858,238 - BWI76_RS13695 0.25 +1.0 2,858,264 + BWI76_RS13695 0.34 -1.6 2,858,270 + BWI76_RS13695 0.36 +0.2 2,858,270 + BWI76_RS13695 0.36 +0.7 2,858,278 - BWI76_RS13695 0.38 -0.4 2,858,310 + BWI76_RS13695 0.49 -1.9 2,858,419 + BWI76_RS13695 0.87 -2.5 2,858,419 + BWI76_RS13695 0.87 -0.6 2,858,419 + BWI76_RS13695 0.87 +0.2 2,858,419 + BWI76_RS13695 0.87 -0.2 2,858,419 + BWI76_RS13695 0.87 -1.4 2,858,419 + BWI76_RS13695 0.87 +0.0 2,858,419 + BWI76_RS13695 0.87 +0.1 2,858,419 + BWI76_RS13695 0.87 -0.2 2,858,419 + +1.7 2,858,419 + BWI76_RS13695 0.87 +0.2 2,858,419 + BWI76_RS13695 0.87 -0.4 2,858,419 + BWI76_RS13695 0.87 +0.6 2,858,419 + BWI76_RS13695 0.87 +1.2 2,858,419 + BWI76_RS13695 0.87 -1.0 2,858,419 + BWI76_RS13695 0.87 -0.2 2,858,421 + BWI76_RS13695 0.88 -1.9 2,858,421 + BWI76_RS13695 0.88 -1.0 2,858,547 + +0.9 2,858,547 + +0.7 2,858,547 + -1.6 2,858,547 + -2.7 2,858,547 + +0.5 2,858,547 + +0.7 2,858,555 - -1.6 2,858,645 - BWI76_RS13700 0.13 -0.1 2,858,665 + BWI76_RS13700 0.15 -0.6 2,858,678 + BWI76_RS13700 0.16 +1.7 2,858,686 + BWI76_RS13700 0.17 +0.1 2,858,688 + BWI76_RS13700 0.17 -1.1 2,858,694 - BWI76_RS13700 0.18 +1.5 2,858,696 - BWI76_RS13700 0.18 -0.3 2,858,745 + BWI76_RS13700 0.24 -1.2 2,858,762 + BWI76_RS13700 0.25 -0.0 2,858,764 - BWI76_RS13700 0.26 -1.0 2,858,772 - BWI76_RS13700 0.26 +0.1 2,858,774 + BWI76_RS13700 0.27 -3.1 2,858,782 - BWI76_RS13700 0.28 +0.6 2,858,787 - BWI76_RS13700 0.28 -2.7 2,858,882 - BWI76_RS13700 0.38 +1.0 2,858,940 + BWI76_RS13700 0.45 +1.2 2,858,950 + BWI76_RS13700 0.46 -2.2 2,858,958 - BWI76_RS13700 0.46 -0.4 2,858,996 + BWI76_RS13700 0.51 -0.1 2,859,041 + BWI76_RS13700 0.55 +0.3 2,859,049 - BWI76_RS13700 0.56 -1.5 2,859,055 - BWI76_RS13700 0.57 -1.2 2,859,056 + BWI76_RS13700 0.57 +0.1 2,859,106 - BWI76_RS13700 0.62 -0.7 2,859,106 - BWI76_RS13700 0.62 +1.0 2,859,106 - BWI76_RS13700 0.62 +0.3
Or see this region's nucleotide sequence