Experiment: 2 day starvation, 37C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0356 and DvMF_0357 are separated by 12 nucleotides DvMF_0357 and DvMF_0358 are separated by 275 nucleotides
DvMF_0356: DvMF_0356 - Tetratricopeptide TPR_4 (RefSeq), at 415,905 to 417,113
_0356
DvMF_0357: DvMF_0357 - histidine triad (HIT) protein (RefSeq), at 417,126 to 418,022
_0357
DvMF_0358: DvMF_0358 - CBS domain containing protein (RefSeq), at 418,298 to 421,531
_0358
Position (kb) 417
418
419 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 416.237 kb on + strand, within DvMF_0356 at 416.415 kb on - strand, within DvMF_0356 at 416.508 kb on - strand, within DvMF_0356 at 416.508 kb on - strand, within DvMF_0356 at 416.554 kb on + strand, within DvMF_0356 at 416.562 kb on - strand, within DvMF_0356 at 416.598 kb on + strand, within DvMF_0356 at 416.722 kb on - strand, within DvMF_0356 at 416.880 kb on + strand, within DvMF_0356 at 416.989 kb on - strand, within DvMF_0356 at 417.089 kb on + strand at 417.097 kb on - strand at 417.099 kb on + strand at 417.603 kb on - strand, within DvMF_0357 at 417.603 kb on - strand, within DvMF_0357 at 417.760 kb on + strand, within DvMF_0357 at 417.766 kb on + strand, within DvMF_0357 at 417.844 kb on + strand, within DvMF_0357 at 417.869 kb on - strand, within DvMF_0357 at 417.914 kb on - strand, within DvMF_0357 at 417.914 kb on - strand, within DvMF_0357 at 418.125 kb on - strand at 418.125 kb on - strand at 418.125 kb on - strand at 418.239 kb on + strand at 418.274 kb on + strand at 418.358 kb on + strand at 418.415 kb on + strand at 418.492 kb on - strand at 418.507 kb on + strand at 418.541 kb on + strand at 418.818 kb on + strand, within DvMF_0358 at 418.908 kb on + strand, within DvMF_0358 at 418.925 kb on + strand, within DvMF_0358
Per-strain Table
Position Strand Gene LocusTag Fraction 2 day starvation, 37C remove 416,237 + DvMF_0356 0.27 -0.0 416,415 - DvMF_0356 0.42 -0.3 416,508 - DvMF_0356 0.50 -0.5 416,508 - DvMF_0356 0.50 -0.7 416,554 + DvMF_0356 0.54 -0.7 416,562 - DvMF_0356 0.54 -0.2 416,598 + DvMF_0356 0.57 -0.4 416,722 - DvMF_0356 0.68 -1.5 416,880 + DvMF_0356 0.81 -1.4 416,989 - DvMF_0356 0.90 -0.7 417,089 + -0.2 417,097 - -0.5 417,099 + +0.4 417,603 - DvMF_0357 0.53 -0.5 417,603 - DvMF_0357 0.53 -1.1 417,760 + DvMF_0357 0.71 -0.7 417,766 + DvMF_0357 0.71 -0.6 417,844 + DvMF_0357 0.80 +0.8 417,869 - DvMF_0357 0.83 -0.6 417,914 - DvMF_0357 0.88 -0.6 417,914 - DvMF_0357 0.88 -0.3 418,125 - -0.1 418,125 - +0.4 418,125 - +0.0 418,239 + +0.5 418,274 + +1.2 418,358 + +0.4 418,415 + -0.5 418,492 - -0.2 418,507 + +0.3 418,541 + +0.9 418,818 + DvMF_0358 0.16 -2.4 418,908 + DvMF_0358 0.19 -0.2 418,925 + DvMF_0358 0.19 -2.8
Or see this region's nucleotide sequence