Experiment: m.b. perchlorate 50 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_3668 and HP15_3669 are separated by 256 nucleotides HP15_3669 and HP15_3670 overlap by 4 nucleotides HP15_3670 and HP15_3671 are separated by 20 nucleotides
HP15_3668: HP15_3668 - sodium/proton antiporter, at 3,865,197 to 3,866,702
_3668
HP15_3669: HP15_3669 - sensory box sensor histidine kinase, at 3,866,959 to 3,867,720
_3669
HP15_3670: HP15_3670 - phosphonate ABC transporter, periplasmic phosphonate-binding protein, at 3,867,717 to 3,868,544
_3670
HP15_3671: HP15_3671 - sensory box/GGDEF family protein, at 3,868,565 to 3,870,502
_3671
Position (kb)
3866
3867
3868 Strain fitness (log2 ratio)
-1
0
1
2 at 3865.995 kb on + strand, within HP15_3668 at 3866.424 kb on - strand, within HP15_3668 at 3866.435 kb on + strand, within HP15_3668 at 3866.443 kb on - strand, within HP15_3668 at 3866.455 kb on + strand, within HP15_3668 at 3866.463 kb on - strand, within HP15_3668 at 3866.933 kb on + strand at 3866.999 kb on + strand at 3867.038 kb on - strand, within HP15_3669 at 3867.094 kb on + strand, within HP15_3669 at 3867.193 kb on + strand, within HP15_3669 at 3867.209 kb on + strand, within HP15_3669 at 3867.224 kb on + strand, within HP15_3669 at 3867.232 kb on - strand, within HP15_3669 at 3867.252 kb on + strand, within HP15_3669 at 3867.347 kb on + strand, within HP15_3669 at 3867.355 kb on - strand, within HP15_3669 at 3867.355 kb on - strand, within HP15_3669 at 3867.355 kb on - strand, within HP15_3669 at 3867.522 kb on - strand, within HP15_3669 at 3867.539 kb on - strand, within HP15_3669 at 3867.646 kb on - strand at 3867.649 kb on - strand at 3867.735 kb on - strand at 3867.772 kb on - strand at 3867.896 kb on + strand, within HP15_3670 at 3867.923 kb on + strand, within HP15_3670 at 3867.966 kb on - strand, within HP15_3670 at 3867.968 kb on - strand, within HP15_3670 at 3867.980 kb on - strand, within HP15_3670 at 3867.980 kb on - strand, within HP15_3670 at 3868.085 kb on + strand, within HP15_3670 at 3868.149 kb on + strand, within HP15_3670 at 3868.156 kb on + strand, within HP15_3670 at 3868.257 kb on + strand, within HP15_3670 at 3868.300 kb on - strand, within HP15_3670 at 3868.321 kb on + strand, within HP15_3670 at 3868.342 kb on - strand, within HP15_3670 at 3868.414 kb on + strand, within HP15_3670 at 3868.414 kb on + strand, within HP15_3670 at 3868.417 kb on - strand, within HP15_3670 at 3868.503 kb on + strand at 3868.506 kb on - strand at 3868.648 kb on + strand at 3868.684 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. perchlorate 50 mM remove 3,865,995 + HP15_3668 0.53 +0.3 3,866,424 - HP15_3668 0.81 -0.9 3,866,435 + HP15_3668 0.82 -0.9 3,866,443 - HP15_3668 0.83 +0.7 3,866,455 + HP15_3668 0.84 +0.0 3,866,463 - HP15_3668 0.84 -0.4 3,866,933 + +1.1 3,866,999 + -0.9 3,867,038 - HP15_3669 0.10 +0.9 3,867,094 + HP15_3669 0.18 +1.4 3,867,193 + HP15_3669 0.31 +2.1 3,867,209 + HP15_3669 0.33 +0.1 3,867,224 + HP15_3669 0.35 +1.3 3,867,232 - HP15_3669 0.36 +0.3 3,867,252 + HP15_3669 0.38 +0.3 3,867,347 + HP15_3669 0.51 -0.3 3,867,355 - HP15_3669 0.52 +0.1 3,867,355 - HP15_3669 0.52 -1.4 3,867,355 - HP15_3669 0.52 +1.2 3,867,522 - HP15_3669 0.74 +0.1 3,867,539 - HP15_3669 0.76 +0.1 3,867,646 - +0.5 3,867,649 - +0.4 3,867,735 - +0.4 3,867,772 - -0.3 3,867,896 + HP15_3670 0.22 +1.0 3,867,923 + HP15_3670 0.25 -0.4 3,867,966 - HP15_3670 0.30 +1.0 3,867,968 - HP15_3670 0.30 -1.2 3,867,980 - HP15_3670 0.32 +0.2 3,867,980 - HP15_3670 0.32 -0.5 3,868,085 + HP15_3670 0.44 +0.2 3,868,149 + HP15_3670 0.52 +0.7 3,868,156 + HP15_3670 0.53 +1.4 3,868,257 + HP15_3670 0.65 +0.2 3,868,300 - HP15_3670 0.70 -0.9 3,868,321 + HP15_3670 0.73 -1.1 3,868,342 - HP15_3670 0.75 -0.5 3,868,414 + HP15_3670 0.84 +0.0 3,868,414 + HP15_3670 0.84 +0.3 3,868,417 - HP15_3670 0.85 -1.2 3,868,503 + -0.3 3,868,506 - +2.4 3,868,648 + +0.3 3,868,684 - -0.3
Or see this region's nucleotide sequence