Strain Fitness in Marinobacter adhaerens HP15 around HP15_3669

Experiment: m.b. perchlorate 50 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_3668 and HP15_3669 are separated by 256 nucleotidesHP15_3669 and HP15_3670 overlap by 4 nucleotidesHP15_3670 and HP15_3671 are separated by 20 nucleotides HP15_3668: HP15_3668 - sodium/proton antiporter, at 3,865,197 to 3,866,702 _3668 HP15_3669: HP15_3669 - sensory box sensor histidine kinase, at 3,866,959 to 3,867,720 _3669 HP15_3670: HP15_3670 - phosphonate ABC transporter, periplasmic phosphonate-binding protein, at 3,867,717 to 3,868,544 _3670 HP15_3671: HP15_3671 - sensory box/GGDEF family protein, at 3,868,565 to 3,870,502 _3671 Position (kb) 3866 3867 3868Strain fitness (log2 ratio) -1 0 1 2at 3865.995 kb on + strand, within HP15_3668at 3866.424 kb on - strand, within HP15_3668at 3866.435 kb on + strand, within HP15_3668at 3866.443 kb on - strand, within HP15_3668at 3866.455 kb on + strand, within HP15_3668at 3866.463 kb on - strand, within HP15_3668at 3866.933 kb on + strandat 3866.999 kb on + strandat 3867.038 kb on - strand, within HP15_3669at 3867.094 kb on + strand, within HP15_3669at 3867.193 kb on + strand, within HP15_3669at 3867.209 kb on + strand, within HP15_3669at 3867.224 kb on + strand, within HP15_3669at 3867.232 kb on - strand, within HP15_3669at 3867.252 kb on + strand, within HP15_3669at 3867.347 kb on + strand, within HP15_3669at 3867.355 kb on - strand, within HP15_3669at 3867.355 kb on - strand, within HP15_3669at 3867.355 kb on - strand, within HP15_3669at 3867.522 kb on - strand, within HP15_3669at 3867.539 kb on - strand, within HP15_3669at 3867.646 kb on - strandat 3867.649 kb on - strandat 3867.735 kb on - strandat 3867.772 kb on - strandat 3867.896 kb on + strand, within HP15_3670at 3867.923 kb on + strand, within HP15_3670at 3867.966 kb on - strand, within HP15_3670at 3867.968 kb on - strand, within HP15_3670at 3867.980 kb on - strand, within HP15_3670at 3867.980 kb on - strand, within HP15_3670at 3868.085 kb on + strand, within HP15_3670at 3868.149 kb on + strand, within HP15_3670at 3868.156 kb on + strand, within HP15_3670at 3868.257 kb on + strand, within HP15_3670at 3868.300 kb on - strand, within HP15_3670at 3868.321 kb on + strand, within HP15_3670at 3868.342 kb on - strand, within HP15_3670at 3868.414 kb on + strand, within HP15_3670at 3868.414 kb on + strand, within HP15_3670at 3868.417 kb on - strand, within HP15_3670at 3868.503 kb on + strandat 3868.506 kb on - strandat 3868.648 kb on + strandat 3868.684 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. perchlorate 50 mM
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3,865,995 + HP15_3668 0.53 +0.3
3,866,424 - HP15_3668 0.81 -0.9
3,866,435 + HP15_3668 0.82 -0.9
3,866,443 - HP15_3668 0.83 +0.7
3,866,455 + HP15_3668 0.84 +0.0
3,866,463 - HP15_3668 0.84 -0.4
3,866,933 + +1.1
3,866,999 + -0.9
3,867,038 - HP15_3669 0.10 +0.9
3,867,094 + HP15_3669 0.18 +1.4
3,867,193 + HP15_3669 0.31 +2.1
3,867,209 + HP15_3669 0.33 +0.1
3,867,224 + HP15_3669 0.35 +1.3
3,867,232 - HP15_3669 0.36 +0.3
3,867,252 + HP15_3669 0.38 +0.3
3,867,347 + HP15_3669 0.51 -0.3
3,867,355 - HP15_3669 0.52 +0.1
3,867,355 - HP15_3669 0.52 -1.4
3,867,355 - HP15_3669 0.52 +1.2
3,867,522 - HP15_3669 0.74 +0.1
3,867,539 - HP15_3669 0.76 +0.1
3,867,646 - +0.5
3,867,649 - +0.4
3,867,735 - +0.4
3,867,772 - -0.3
3,867,896 + HP15_3670 0.22 +1.0
3,867,923 + HP15_3670 0.25 -0.4
3,867,966 - HP15_3670 0.30 +1.0
3,867,968 - HP15_3670 0.30 -1.2
3,867,980 - HP15_3670 0.32 +0.2
3,867,980 - HP15_3670 0.32 -0.5
3,868,085 + HP15_3670 0.44 +0.2
3,868,149 + HP15_3670 0.52 +0.7
3,868,156 + HP15_3670 0.53 +1.4
3,868,257 + HP15_3670 0.65 +0.2
3,868,300 - HP15_3670 0.70 -0.9
3,868,321 + HP15_3670 0.73 -1.1
3,868,342 - HP15_3670 0.75 -0.5
3,868,414 + HP15_3670 0.84 +0.0
3,868,414 + HP15_3670 0.84 +0.3
3,868,417 - HP15_3670 0.85 -1.2
3,868,503 + -0.3
3,868,506 - +2.4
3,868,648 + +0.3
3,868,684 - -0.3

Or see this region's nucleotide sequence