Strain Fitness in Marinobacter adhaerens HP15 around HP15_1454

Experiment: m.b. perchlorate 50 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_1453 and HP15_1454 are separated by 132 nucleotidesHP15_1454 and HP15_1455 are separated by 5 nucleotides HP15_1453: HP15_1453 - long-chain acyl-CoA synthetase, at 1,528,203 to 1,529,840 _1453 HP15_1454: HP15_1454 - thioesterase domain protein, at 1,529,973 to 1,530,458 _1454 HP15_1455: HP15_1455 - iron(III) ABC transporter, permease protein, at 1,530,464 to 1,532,077 _1455 Position (kb) 1529 1530 1531Strain fitness (log2 ratio) -3 -2 -1 0 1at 1529.089 kb on - strand, within HP15_1453at 1529.115 kb on + strand, within HP15_1453at 1529.130 kb on + strand, within HP15_1453at 1529.305 kb on - strand, within HP15_1453at 1529.426 kb on - strand, within HP15_1453at 1529.561 kb on + strand, within HP15_1453at 1529.668 kb on - strand, within HP15_1453at 1529.685 kb on + strandat 1529.941 kb on + strandat 1529.949 kb on - strandat 1530.110 kb on + strand, within HP15_1454at 1530.208 kb on - strand, within HP15_1454at 1530.236 kb on + strand, within HP15_1454at 1530.460 kb on - strandat 1530.482 kb on + strandat 1530.579 kb on - strandat 1530.739 kb on + strand, within HP15_1455at 1530.837 kb on + strand, within HP15_1455at 1530.870 kb on + strand, within HP15_1455at 1530.936 kb on - strandat 1530.984 kb on + strand, within HP15_1455at 1531.287 kb on - strand, within HP15_1455

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. perchlorate 50 mM
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1,529,089 - HP15_1453 0.54 +0.4
1,529,115 + HP15_1453 0.56 +0.5
1,529,130 + HP15_1453 0.57 -0.0
1,529,305 - HP15_1453 0.67 +0.5
1,529,426 - HP15_1453 0.75 -0.6
1,529,561 + HP15_1453 0.83 +0.5
1,529,668 - HP15_1453 0.89 +1.3
1,529,685 + -0.2
1,529,941 + +0.1
1,529,949 - -1.0
1,530,110 + HP15_1454 0.28 -1.0
1,530,208 - HP15_1454 0.48 -1.1
1,530,236 + HP15_1454 0.54 -0.3
1,530,460 - -0.2
1,530,482 + -0.5
1,530,579 - -1.8
1,530,739 + HP15_1455 0.17 -0.8
1,530,837 + HP15_1455 0.23 -0.9
1,530,870 + HP15_1455 0.25 -3.2
1,530,936 - -2.1
1,530,984 + HP15_1455 0.32 -1.1
1,531,287 - HP15_1455 0.51 -0.9

Or see this region's nucleotide sequence