Experiment: pyruvate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3257 and Dsui_3258 are separated by 2 nucleotides Dsui_3258 and Dsui_3259 are separated by 138 nucleotides Dsui_3259 and Dsui_3260 are separated by 65 nucleotides
Dsui_3257: Dsui_3257 - bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities, at 3,496,565 to 3,497,710
_3257
Dsui_3258: Dsui_3258 - mannose-6-phosphate isomerase, at 3,497,713 to 3,498,105
_3258
Dsui_3259: Dsui_3259 - dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein, at 3,498,244 to 3,499,014
_3259
Dsui_3260: Dsui_3260 - vacuolar-type H(+)-translocating pyrophosphatase, at 3,499,080 to 3,501,149
_3260
Position (kb)
3497
3498
3499 Strain fitness (log2 ratio)
-2
-1
0
1 at 3496.714 kb on + strand, within Dsui_3257 at 3496.722 kb on - strand, within Dsui_3257 at 3496.724 kb on + strand, within Dsui_3257 at 3496.783 kb on - strand, within Dsui_3257 at 3496.812 kb on - strand, within Dsui_3257 at 3496.843 kb on - strand, within Dsui_3257 at 3496.911 kb on - strand at 3496.980 kb on + strand at 3496.985 kb on + strand at 3496.988 kb on - strand, within Dsui_3257 at 3497.034 kb on - strand, within Dsui_3257 at 3497.063 kb on + strand, within Dsui_3257 at 3497.126 kb on + strand, within Dsui_3257 at 3497.138 kb on - strand, within Dsui_3257 at 3497.160 kb on - strand, within Dsui_3257 at 3497.290 kb on + strand at 3497.290 kb on + strand at 3497.290 kb on + strand, within Dsui_3257 at 3497.314 kb on + strand at 3497.356 kb on - strand, within Dsui_3257 at 3497.363 kb on - strand, within Dsui_3257 at 3497.397 kb on - strand, within Dsui_3257 at 3497.397 kb on - strand, within Dsui_3257 at 3497.412 kb on - strand, within Dsui_3257 at 3497.427 kb on - strand, within Dsui_3257 at 3497.574 kb on + strand, within Dsui_3257 at 3497.665 kb on - strand at 3497.712 kb on + strand at 3497.785 kb on - strand, within Dsui_3258 at 3497.802 kb on + strand, within Dsui_3258 at 3497.810 kb on - strand, within Dsui_3258 at 3497.823 kb on - strand, within Dsui_3258 at 3497.923 kb on - strand, within Dsui_3258 at 3497.955 kb on - strand, within Dsui_3258 at 3498.106 kb on - strand at 3498.145 kb on + strand at 3498.247 kb on + strand at 3498.332 kb on + strand, within Dsui_3259 at 3498.517 kb on + strand, within Dsui_3259 at 3498.522 kb on - strand at 3498.552 kb on - strand at 3498.696 kb on - strand, within Dsui_3259 at 3498.744 kb on + strand, within Dsui_3259 at 3498.764 kb on + strand, within Dsui_3259 at 3498.770 kb on + strand, within Dsui_3259 at 3498.770 kb on + strand, within Dsui_3259 at 3498.778 kb on - strand at 3498.920 kb on + strand, within Dsui_3259 at 3498.940 kb on + strand at 3498.941 kb on - strand at 3499.077 kb on + strand at 3499.078 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction pyruvate (C) remove 3,496,714 + Dsui_3257 0.13 -0.9 3,496,722 - Dsui_3257 0.14 +0.7 3,496,724 + Dsui_3257 0.14 -1.3 3,496,783 - Dsui_3257 0.19 -1.3 3,496,812 - Dsui_3257 0.22 -2.1 3,496,843 - Dsui_3257 0.24 -2.1 3,496,911 - +0.7 3,496,980 + -0.9 3,496,985 + -0.9 3,496,988 - Dsui_3257 0.37 -0.9 3,497,034 - Dsui_3257 0.41 -1.9 3,497,063 + Dsui_3257 0.43 +0.7 3,497,126 + Dsui_3257 0.49 -0.3 3,497,138 - Dsui_3257 0.50 -1.1 3,497,160 - Dsui_3257 0.52 -2.3 3,497,290 + +0.7 3,497,290 + +0.7 3,497,290 + Dsui_3257 0.63 +0.7 3,497,314 + -0.3 3,497,356 - Dsui_3257 0.69 +0.7 3,497,363 - Dsui_3257 0.70 -1.1 3,497,397 - Dsui_3257 0.73 +0.1 3,497,397 - Dsui_3257 0.73 -1.6 3,497,412 - Dsui_3257 0.74 +0.7 3,497,427 - Dsui_3257 0.75 -1.3 3,497,574 + Dsui_3257 0.88 -1.3 3,497,665 - -0.3 3,497,712 + -1.6 3,497,785 - Dsui_3258 0.18 -1.3 3,497,802 + Dsui_3258 0.23 +0.7 3,497,810 - Dsui_3258 0.25 -1.6 3,497,823 - Dsui_3258 0.28 -0.3 3,497,923 - Dsui_3258 0.53 -0.9 3,497,955 - Dsui_3258 0.62 +0.5 3,498,106 - -1.6 3,498,145 + +0.7 3,498,247 + -0.3 3,498,332 + Dsui_3259 0.11 -0.3 3,498,517 + Dsui_3259 0.35 -0.3 3,498,522 - +0.7 3,498,552 - +0.7 3,498,696 - Dsui_3259 0.59 -0.9 3,498,744 + Dsui_3259 0.65 -1.6 3,498,764 + Dsui_3259 0.67 -0.9 3,498,770 + Dsui_3259 0.68 -0.9 3,498,770 + Dsui_3259 0.68 -0.9 3,498,778 - +0.7 3,498,920 + Dsui_3259 0.88 -2.1 3,498,940 + +0.7 3,498,941 - +0.7 3,499,077 + +0.7 3,499,078 + -0.9
Or see this region's nucleotide sequence