Experiment: pyruvate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2970 and Dsui_2971 overlap by 4 nucleotides Dsui_2971 and Dsui_2972 are separated by 106 nucleotides Dsui_2972 and Dsui_2973 are separated by 5 nucleotides Dsui_2973 and Dsui_2974 are separated by 4 nucleotides
Dsui_2970: Dsui_2970 - putative Fe-S oxidoreductase, at 3,176,380 to 3,176,670
_2970
Dsui_2971: Dsui_2971 - putative esterase of the alpha-beta hydrolase superfamily, at 3,176,667 to 3,177,560
_2971
Dsui_2972: Dsui_2972 - leucyl/phenylalanyl-tRNA--protein transferase, at 3,177,667 to 3,178,383
_2972
Dsui_2973: Dsui_2973 - putative arginyl-tRNA:protein arginylyltransferase, at 3,178,389 to 3,179,162
_2973
Dsui_2974: Dsui_2974 - putative iron-regulated membrane protein, at 3,179,167 to 3,180,438
_2974
Position (kb)
3177
3178
3179 Strain fitness (log2 ratio)
-1
0
1 at 3176.850 kb on + strand, within Dsui_2971 at 3176.858 kb on - strand, within Dsui_2971 at 3176.863 kb on + strand, within Dsui_2971 at 3176.935 kb on + strand at 3176.943 kb on - strand, within Dsui_2971 at 3177.060 kb on - strand, within Dsui_2971 at 3177.128 kb on + strand at 3177.198 kb on - strand, within Dsui_2971 at 3177.245 kb on + strand at 3177.245 kb on + strand, within Dsui_2971 at 3177.289 kb on + strand at 3177.403 kb on - strand, within Dsui_2971 at 3177.432 kb on - strand, within Dsui_2971 at 3177.632 kb on - strand at 3177.637 kb on - strand at 3177.643 kb on - strand at 3177.680 kb on - strand at 3177.834 kb on + strand, within Dsui_2972 at 3177.834 kb on - strand at 3177.839 kb on + strand, within Dsui_2972 at 3177.864 kb on - strand, within Dsui_2972 at 3177.922 kb on + strand, within Dsui_2972 at 3177.955 kb on - strand at 3178.163 kb on + strand, within Dsui_2972 at 3178.233 kb on + strand, within Dsui_2972 at 3178.241 kb on + strand, within Dsui_2972 at 3178.241 kb on + strand, within Dsui_2972 at 3178.441 kb on - strand at 3178.457 kb on - strand at 3178.486 kb on + strand, within Dsui_2973 at 3178.726 kb on + strand, within Dsui_2973 at 3178.936 kb on + strand, within Dsui_2973 at 3178.969 kb on + strand, within Dsui_2973 at 3179.151 kb on + strand at 3179.182 kb on + strand at 3179.237 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction pyruvate (C) remove 3,176,850 + Dsui_2971 0.20 -0.1 3,176,858 - Dsui_2971 0.21 -0.8 3,176,863 + Dsui_2971 0.22 -0.1 3,176,935 + +0.9 3,176,943 - Dsui_2971 0.31 -0.8 3,177,060 - Dsui_2971 0.44 +0.9 3,177,128 + -1.4 3,177,198 - Dsui_2971 0.59 -0.3 3,177,245 + -0.1 3,177,245 + Dsui_2971 0.65 +0.9 3,177,289 + +0.9 3,177,403 - Dsui_2971 0.82 -0.4 3,177,432 - Dsui_2971 0.86 -1.1 3,177,632 - +0.9 3,177,637 - +0.9 3,177,643 - +0.9 3,177,680 - +0.9 3,177,834 + Dsui_2972 0.23 -1.4 3,177,834 - +0.9 3,177,839 + Dsui_2972 0.24 +0.9 3,177,864 - Dsui_2972 0.27 -0.7 3,177,922 + Dsui_2972 0.36 -1.1 3,177,955 - -0.7 3,178,163 + Dsui_2972 0.69 +0.2 3,178,233 + Dsui_2972 0.79 -0.0 3,178,241 + Dsui_2972 0.80 -0.2 3,178,241 + Dsui_2972 0.80 +0.0 3,178,441 - +0.9 3,178,457 - +0.9 3,178,486 + Dsui_2973 0.13 +0.1 3,178,726 + Dsui_2973 0.44 -0.7 3,178,936 + Dsui_2973 0.71 -0.5 3,178,969 + Dsui_2973 0.75 -0.5 3,179,151 + -0.5 3,179,182 + -1.0 3,179,237 - +0.9
Or see this region's nucleotide sequence