Experiment: pyruvate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2816 and Dsui_2817 are separated by 184 nucleotides Dsui_2817 and Dsui_2818 overlap by 1 nucleotides Dsui_2818 and Dsui_2819 overlap by 31 nucleotides
Dsui_2816: Dsui_2816 - (p)ppGpp synthetase, RelA/SpoT family, at 2,991,497 to 2,993,719
_2816
Dsui_2817: Dsui_2817 - DMT(drug/metabolite transporter) superfamily permease, at 2,993,904 to 2,994,830
_2817
Dsui_2818: Dsui_2818 - hypothetical protein, at 2,994,830 to 2,995,630
_2818
Dsui_2819: Dsui_2819 - putative hydrolase or acyltransferase of alpha/beta superfamily, at 2,995,600 to 2,996,373
_2819
Position (kb)
2993
2994
2995 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2993.021 kb on - strand, within Dsui_2816 at 2993.573 kb on - strand at 2993.687 kb on - strand at 2993.702 kb on - strand at 2993.876 kb on + strand at 2993.876 kb on + strand at 2993.901 kb on + strand at 2993.929 kb on - strand at 2993.982 kb on + strand at 2994.072 kb on + strand, within Dsui_2817 at 2994.180 kb on + strand, within Dsui_2817 at 2994.180 kb on + strand, within Dsui_2817 at 2994.183 kb on + strand, within Dsui_2817 at 2994.185 kb on + strand, within Dsui_2817 at 2994.193 kb on - strand, within Dsui_2817 at 2994.315 kb on - strand at 2994.358 kb on + strand, within Dsui_2817 at 2994.413 kb on - strand at 2994.740 kb on + strand at 2994.784 kb on + strand at 2994.789 kb on + strand at 2994.859 kb on + strand at 2994.870 kb on + strand at 2995.031 kb on + strand, within Dsui_2818 at 2995.039 kb on - strand, within Dsui_2818 at 2995.145 kb on + strand, within Dsui_2818 at 2995.164 kb on - strand, within Dsui_2818 at 2995.290 kb on + strand at 2995.297 kb on - strand, within Dsui_2818 at 2995.310 kb on + strand, within Dsui_2818 at 2995.464 kb on - strand, within Dsui_2818 at 2995.519 kb on + strand, within Dsui_2818 at 2995.527 kb on - strand, within Dsui_2818 at 2995.562 kb on - strand at 2995.694 kb on + strand, within Dsui_2819 at 2995.821 kb on - strand, within Dsui_2819
Per-strain Table
Position Strand Gene LocusTag Fraction pyruvate (C) remove 2,993,021 - Dsui_2816 0.69 -1.8 2,993,573 - -2.8 2,993,687 - -3.2 2,993,702 - -0.6 2,993,876 + -0.0 2,993,876 + +1.0 2,993,901 + +1.0 2,993,929 - +1.0 2,993,982 + -1.4 2,994,072 + Dsui_2817 0.18 -0.6 2,994,180 + Dsui_2817 0.30 -0.0 2,994,180 + Dsui_2817 0.30 -1.4 2,994,183 + Dsui_2817 0.30 +1.0 2,994,185 + Dsui_2817 0.30 +1.0 2,994,193 - Dsui_2817 0.31 -0.6 2,994,315 - -0.0 2,994,358 + Dsui_2817 0.49 -1.4 2,994,413 - +1.0 2,994,740 + -1.6 2,994,784 + -0.0 2,994,789 + +1.0 2,994,859 + +1.0 2,994,870 + -0.0 2,995,031 + Dsui_2818 0.25 +1.0 2,995,039 - Dsui_2818 0.26 -0.0 2,995,145 + Dsui_2818 0.39 +1.0 2,995,164 - Dsui_2818 0.42 +1.0 2,995,290 + +1.0 2,995,297 - Dsui_2818 0.58 +1.0 2,995,310 + Dsui_2818 0.60 -1.0 2,995,464 - Dsui_2818 0.79 -1.0 2,995,519 + Dsui_2818 0.86 -0.0 2,995,527 - Dsui_2818 0.87 -0.0 2,995,562 - -1.4 2,995,694 + Dsui_2819 0.12 -1.4 2,995,821 - Dsui_2819 0.29 -1.4
Or see this region's nucleotide sequence