Experiment: pyruvate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1913 and Dsui_1914 are separated by 218 nucleotides Dsui_1914 and Dsui_1915 overlap by 23 nucleotides Dsui_1915 and Dsui_1916 are separated by 13 nucleotides
Dsui_1913: Dsui_1913 - signal transduction histidine kinase, at 2,015,179 to 2,016,441
_1913
Dsui_1914: Dsui_1914 - hypothetical protein, at 2,016,660 to 2,016,908
_1914
Dsui_1915: Dsui_1915 - cytochrome bd-type quinol oxidase, subunit 1, at 2,016,886 to 2,018,433
_1915
Dsui_1916: Dsui_1916 - cytochrome d oxidase cyd, subunit II, at 2,018,447 to 2,019,586
_1916
Position (kb)
2016
2017
2018
2019 Strain fitness (log2 ratio)
-1
0
1 at 2016.035 kb on - strand at 2016.114 kb on + strand at 2016.121 kb on + strand, within Dsui_1913 at 2016.258 kb on - strand at 2016.493 kb on - strand at 2016.507 kb on + strand at 2016.609 kb on - strand at 2016.781 kb on - strand at 2016.782 kb on + strand at 2016.837 kb on + strand, within Dsui_1914 at 2016.864 kb on - strand at 2016.968 kb on + strand at 2016.976 kb on - strand at 2016.976 kb on - strand at 2017.070 kb on - strand at 2017.172 kb on + strand, within Dsui_1915 at 2017.398 kb on + strand, within Dsui_1915 at 2017.434 kb on + strand, within Dsui_1915 at 2017.442 kb on - strand at 2017.648 kb on - strand at 2017.648 kb on - strand, within Dsui_1915 at 2017.707 kb on + strand at 2017.864 kb on + strand, within Dsui_1915 at 2017.908 kb on + strand at 2017.938 kb on + strand, within Dsui_1915 at 2017.946 kb on - strand at 2017.981 kb on - strand, within Dsui_1915 at 2018.123 kb on + strand at 2018.198 kb on + strand at 2018.365 kb on - strand at 2018.427 kb on + strand at 2018.496 kb on - strand at 2018.503 kb on + strand at 2018.799 kb on + strand at 2018.834 kb on + strand at 2018.848 kb on - strand, within Dsui_1916 at 2018.929 kb on + strand, within Dsui_1916 at 2019.042 kb on - strand, within Dsui_1916 at 2019.105 kb on + strand, within Dsui_1916 at 2019.249 kb on + strand, within Dsui_1916 at 2019.259 kb on + strand, within Dsui_1916 at 2019.342 kb on + strand at 2019.396 kb on + strand at 2019.404 kb on - strand at 2019.414 kb on - strand at 2019.414 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction pyruvate (C) remove 2,016,035 - +1.0 2,016,114 + +1.0 2,016,121 + Dsui_1913 0.75 -1.6 2,016,258 - +1.0 2,016,493 - +0.0 2,016,507 + +1.0 2,016,609 - +0.0 2,016,781 - +1.0 2,016,782 + +1.0 2,016,837 + Dsui_1914 0.71 -0.6 2,016,864 - +1.0 2,016,968 + +0.0 2,016,976 - +1.0 2,016,976 - -0.6 2,017,070 - +1.0 2,017,172 + Dsui_1915 0.18 -1.6 2,017,398 + Dsui_1915 0.33 +1.0 2,017,434 + Dsui_1915 0.35 +0.0 2,017,442 - +1.0 2,017,648 - -0.6 2,017,648 - Dsui_1915 0.49 +1.0 2,017,707 + +1.0 2,017,864 + Dsui_1915 0.63 -1.6 2,017,908 + +1.0 2,017,938 + Dsui_1915 0.68 +1.0 2,017,946 - +1.0 2,017,981 - Dsui_1915 0.71 -1.6 2,018,123 + +1.0 2,018,198 + +1.0 2,018,365 - +1.0 2,018,427 + +1.0 2,018,496 - +1.0 2,018,503 + -0.6 2,018,799 + +0.0 2,018,834 + +1.0 2,018,848 - Dsui_1916 0.35 -0.6 2,018,929 + Dsui_1916 0.42 -1.3 2,019,042 - Dsui_1916 0.52 +1.0 2,019,105 + Dsui_1916 0.58 +0.0 2,019,249 + Dsui_1916 0.70 -1.0 2,019,259 + Dsui_1916 0.71 +0.0 2,019,342 + +1.0 2,019,396 + -0.6 2,019,404 - +1.0 2,019,414 - +1.0 2,019,414 - +1.0
Or see this region's nucleotide sequence