Experiment: pyruvate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1737 and Dsui_1738 are separated by 19 nucleotides Dsui_1738 and Dsui_1739 are separated by 22 nucleotides Dsui_1739 and Dsui_1740 are separated by 42 nucleotides
Dsui_1737: Dsui_1737 - flagellar basal-body rod protein FlgG, at 1,825,682 to 1,826,464
_1737
Dsui_1738: Dsui_1738 - flagellar basal body L-ring protein, at 1,826,484 to 1,827,149
_1738
Dsui_1739: Dsui_1739 - flagellar basal-body P-ring protein, at 1,827,172 to 1,828,305
_1739
Dsui_1740: Dsui_1740 - flagellar rod assembly protein/muramidase FlgJ, at 1,828,348 to 1,829,346
_1740
Position (kb)
1827
1828
1829 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1826.183 kb on + strand, within Dsui_1737 at 1826.188 kb on + strand, within Dsui_1737 at 1826.188 kb on + strand, within Dsui_1737 at 1826.188 kb on + strand, within Dsui_1737 at 1826.191 kb on - strand, within Dsui_1737 at 1826.191 kb on - strand, within Dsui_1737 at 1826.196 kb on - strand, within Dsui_1737 at 1826.196 kb on - strand, within Dsui_1737 at 1826.304 kb on - strand, within Dsui_1737 at 1826.305 kb on - strand, within Dsui_1737 at 1826.368 kb on + strand, within Dsui_1737 at 1826.380 kb on + strand, within Dsui_1737 at 1826.381 kb on + strand, within Dsui_1737 at 1826.458 kb on + strand at 1826.461 kb on - strand at 1826.461 kb on - strand at 1826.556 kb on + strand, within Dsui_1738 at 1826.565 kb on - strand, within Dsui_1738 at 1826.567 kb on + strand, within Dsui_1738 at 1826.567 kb on + strand, within Dsui_1738 at 1826.581 kb on + strand, within Dsui_1738 at 1826.581 kb on + strand, within Dsui_1738 at 1826.641 kb on + strand, within Dsui_1738 at 1826.649 kb on - strand, within Dsui_1738 at 1826.743 kb on - strand, within Dsui_1738 at 1826.758 kb on - strand, within Dsui_1738 at 1826.786 kb on - strand, within Dsui_1738 at 1826.896 kb on + strand, within Dsui_1738 at 1826.914 kb on - strand, within Dsui_1738 at 1826.920 kb on - strand, within Dsui_1738 at 1826.970 kb on + strand, within Dsui_1738 at 1826.978 kb on - strand, within Dsui_1738 at 1826.989 kb on + strand, within Dsui_1738 at 1826.997 kb on - strand, within Dsui_1738 at 1826.999 kb on + strand, within Dsui_1738 at 1827.007 kb on - strand, within Dsui_1738 at 1827.007 kb on - strand, within Dsui_1738 at 1827.074 kb on - strand, within Dsui_1738 at 1827.096 kb on + strand at 1827.133 kb on + strand at 1827.141 kb on - strand at 1827.187 kb on + strand at 1827.201 kb on - strand at 1827.201 kb on - strand at 1827.204 kb on + strand at 1827.255 kb on + strand at 1827.289 kb on - strand, within Dsui_1739 at 1827.322 kb on - strand, within Dsui_1739 at 1827.322 kb on - strand, within Dsui_1739 at 1827.338 kb on - strand, within Dsui_1739 at 1827.367 kb on + strand, within Dsui_1739 at 1827.376 kb on + strand, within Dsui_1739 at 1827.489 kb on + strand, within Dsui_1739 at 1827.507 kb on - strand, within Dsui_1739 at 1827.587 kb on - strand at 1827.597 kb on + strand, within Dsui_1739 at 1827.597 kb on + strand, within Dsui_1739 at 1827.597 kb on + strand, within Dsui_1739 at 1827.605 kb on - strand, within Dsui_1739 at 1827.605 kb on - strand, within Dsui_1739 at 1827.610 kb on + strand, within Dsui_1739 at 1827.610 kb on + strand, within Dsui_1739 at 1827.740 kb on + strand, within Dsui_1739 at 1827.798 kb on - strand, within Dsui_1739 at 1827.860 kb on - strand, within Dsui_1739 at 1827.884 kb on + strand, within Dsui_1739 at 1827.989 kb on + strand, within Dsui_1739 at 1828.094 kb on - strand, within Dsui_1739 at 1828.201 kb on + strand at 1828.260 kb on - strand at 1828.267 kb on - strand at 1828.330 kb on + strand at 1828.330 kb on + strand at 1828.343 kb on - strand at 1828.362 kb on + strand at 1828.449 kb on - strand, within Dsui_1740 at 1828.540 kb on + strand, within Dsui_1740 at 1828.548 kb on - strand, within Dsui_1740 at 1828.548 kb on - strand, within Dsui_1740 at 1828.551 kb on + strand, within Dsui_1740 at 1828.608 kb on + strand, within Dsui_1740 at 1828.626 kb on + strand, within Dsui_1740 at 1828.692 kb on + strand, within Dsui_1740 at 1828.725 kb on - strand, within Dsui_1740 at 1828.735 kb on + strand, within Dsui_1740 at 1828.759 kb on + strand, within Dsui_1740 at 1828.798 kb on - strand, within Dsui_1740 at 1828.856 kb on - strand, within Dsui_1740 at 1829.111 kb on + strand, within Dsui_1740 at 1829.116 kb on + strand, within Dsui_1740 at 1829.116 kb on + strand, within Dsui_1740 at 1829.124 kb on - strand, within Dsui_1740 at 1829.145 kb on + strand, within Dsui_1740 at 1829.177 kb on + strand, within Dsui_1740 at 1829.220 kb on - strand, within Dsui_1740 at 1829.275 kb on + strand at 1829.275 kb on + strand at 1829.275 kb on + strand at 1829.297 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction pyruvate (C) remove 1,826,183 + Dsui_1737 0.64 -0.7 1,826,188 + Dsui_1737 0.65 +0.7 1,826,188 + Dsui_1737 0.65 +0.7 1,826,188 + Dsui_1737 0.65 +0.2 1,826,191 - Dsui_1737 0.65 +0.7 1,826,191 - Dsui_1737 0.65 -0.3 1,826,196 - Dsui_1737 0.66 -0.3 1,826,196 - Dsui_1737 0.66 -1.7 1,826,304 - Dsui_1737 0.79 -0.3 1,826,305 - Dsui_1737 0.80 -0.3 1,826,368 + Dsui_1737 0.88 -1.7 1,826,380 + Dsui_1737 0.89 -1.3 1,826,381 + Dsui_1737 0.89 +1.7 1,826,458 + -1.6 1,826,461 - -1.9 1,826,461 - +0.7 1,826,556 + Dsui_1738 0.11 -0.9 1,826,565 - Dsui_1738 0.12 -0.3 1,826,567 + Dsui_1738 0.12 -0.9 1,826,567 + Dsui_1738 0.12 +0.7 1,826,581 + Dsui_1738 0.15 -2.1 1,826,581 + Dsui_1738 0.15 +0.7 1,826,641 + Dsui_1738 0.24 -0.9 1,826,649 - Dsui_1738 0.25 +0.7 1,826,743 - Dsui_1738 0.39 -0.3 1,826,758 - Dsui_1738 0.41 -0.3 1,826,786 - Dsui_1738 0.45 +0.7 1,826,896 + Dsui_1738 0.62 -0.3 1,826,914 - Dsui_1738 0.65 +0.7 1,826,920 - Dsui_1738 0.65 +0.7 1,826,970 + Dsui_1738 0.73 -0.9 1,826,978 - Dsui_1738 0.74 +0.7 1,826,989 + Dsui_1738 0.76 +1.7 1,826,997 - Dsui_1738 0.77 +0.7 1,826,999 + Dsui_1738 0.77 -1.3 1,827,007 - Dsui_1738 0.79 +0.7 1,827,007 - Dsui_1738 0.79 +0.7 1,827,074 - Dsui_1738 0.89 -0.3 1,827,096 + +1.7 1,827,133 + -0.9 1,827,141 - -1.3 1,827,187 + -2.0 1,827,201 - +0.7 1,827,201 - +0.7 1,827,204 + -0.3 1,827,255 + +0.7 1,827,289 - Dsui_1739 0.10 -0.3 1,827,322 - Dsui_1739 0.13 -0.9 1,827,322 - Dsui_1739 0.13 -0.3 1,827,338 - Dsui_1739 0.15 -0.9 1,827,367 + Dsui_1739 0.17 -1.6 1,827,376 + Dsui_1739 0.18 +0.2 1,827,489 + Dsui_1739 0.28 -0.3 1,827,507 - Dsui_1739 0.30 -0.9 1,827,587 - +0.7 1,827,597 + Dsui_1739 0.37 -0.3 1,827,597 + Dsui_1739 0.37 -2.3 1,827,597 + Dsui_1739 0.37 -0.9 1,827,605 - Dsui_1739 0.38 +0.7 1,827,605 - Dsui_1739 0.38 -0.9 1,827,610 + Dsui_1739 0.39 -1.3 1,827,610 + Dsui_1739 0.39 +0.4 1,827,740 + Dsui_1739 0.50 +0.7 1,827,798 - Dsui_1739 0.55 -0.9 1,827,860 - Dsui_1739 0.61 -1.3 1,827,884 + Dsui_1739 0.63 -0.3 1,827,989 + Dsui_1739 0.72 -0.3 1,828,094 - Dsui_1739 0.81 +0.7 1,828,201 + +1.7 1,828,260 - +0.7 1,828,267 - -1.3 1,828,330 + -0.7 1,828,330 + +0.3 1,828,343 - +0.7 1,828,362 + +0.0 1,828,449 - Dsui_1740 0.10 +0.7 1,828,540 + Dsui_1740 0.19 -0.6 1,828,548 - Dsui_1740 0.20 -1.3 1,828,548 - Dsui_1740 0.20 -0.9 1,828,551 + Dsui_1740 0.20 -0.1 1,828,608 + Dsui_1740 0.26 -0.8 1,828,626 + Dsui_1740 0.28 -1.3 1,828,692 + Dsui_1740 0.34 -0.2 1,828,725 - Dsui_1740 0.38 +0.7 1,828,735 + Dsui_1740 0.39 -0.5 1,828,759 + Dsui_1740 0.41 +0.0 1,828,798 - Dsui_1740 0.45 +0.7 1,828,856 - Dsui_1740 0.51 -1.6 1,829,111 + Dsui_1740 0.76 -0.5 1,829,116 + Dsui_1740 0.77 -0.1 1,829,116 + Dsui_1740 0.77 -0.4 1,829,124 - Dsui_1740 0.78 -0.9 1,829,145 + Dsui_1740 0.80 -0.7 1,829,177 + Dsui_1740 0.83 +2.0 1,829,220 - Dsui_1740 0.87 -0.3 1,829,275 + +0.2 1,829,275 + -0.3 1,829,275 + -0.9 1,829,297 - +0.7
Or see this region's nucleotide sequence