Experiment: pyruvate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1668 and Dsui_1669 are separated by 102 nucleotides Dsui_1669 and Dsui_1670 are separated by 28 nucleotides
Dsui_1668: Dsui_1668 - alpha-hydroxyacid dehydrogenase, FMN-dependent L-lactate dehydrogenase, at 1,752,845 to 1,753,969
_1668
Dsui_1669: Dsui_1669 - trypsin-like serine protease with C-terminal PDZ domain, at 1,754,072 to 1,755,490
_1669
Dsui_1670: Dsui_1670 - cytochrome c peroxidase, at 1,755,519 to 1,756,628
_1670
Position (kb)
1754
1755
1756 Strain fitness (log2 ratio)
-2
-1
0
1 at 1753.143 kb on - strand, within Dsui_1668 at 1753.309 kb on - strand at 1753.762 kb on - strand, within Dsui_1668 at 1753.874 kb on - strand at 1754.117 kb on - strand at 1754.232 kb on - strand at 1754.345 kb on - strand at 1754.365 kb on + strand at 1754.391 kb on - strand, within Dsui_1669 at 1754.718 kb on + strand at 1754.872 kb on - strand, within Dsui_1669 at 1754.969 kb on + strand, within Dsui_1669 at 1755.166 kb on + strand at 1755.171 kb on - strand, within Dsui_1669 at 1755.184 kb on - strand at 1755.370 kb on + strand at 1755.462 kb on - strand at 1755.515 kb on - strand at 1755.562 kb on - strand at 1755.676 kb on + strand at 1755.684 kb on - strand, within Dsui_1670 at 1755.717 kb on + strand, within Dsui_1670 at 1755.782 kb on + strand at 1755.835 kb on - strand, within Dsui_1670 at 1755.913 kb on - strand at 1756.039 kb on - strand, within Dsui_1670 at 1756.057 kb on + strand at 1756.214 kb on - strand at 1756.351 kb on - strand, within Dsui_1670 at 1756.351 kb on - strand, within Dsui_1670 at 1756.443 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction pyruvate (C) remove 1,753,143 - Dsui_1668 0.26 +1.6 1,753,309 - -0.4 1,753,762 - Dsui_1668 0.82 -1.7 1,753,874 - +0.6 1,754,117 - -1.4 1,754,232 - +0.6 1,754,345 - -0.4 1,754,365 + +0.6 1,754,391 - Dsui_1669 0.22 -0.4 1,754,718 + +0.6 1,754,872 - Dsui_1669 0.56 -2.2 1,754,969 + Dsui_1669 0.63 -0.9 1,755,166 + +0.6 1,755,171 - Dsui_1669 0.77 -1.4 1,755,184 - +0.6 1,755,370 + +0.6 1,755,462 - -2.0 1,755,515 - +0.6 1,755,562 - -0.5 1,755,676 + +0.6 1,755,684 - Dsui_1670 0.15 -0.4 1,755,717 + Dsui_1670 0.18 -1.0 1,755,782 + -1.0 1,755,835 - Dsui_1670 0.28 -2.4 1,755,913 - -1.0 1,756,039 - Dsui_1670 0.47 -0.4 1,756,057 + -0.4 1,756,214 - -0.4 1,756,351 - Dsui_1670 0.75 -1.0 1,756,351 - Dsui_1670 0.75 -0.4 1,756,443 + -0.4
Or see this region's nucleotide sequence