Experiment: pyruvate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1529 and Dsui_1530 are separated by 31 nucleotides Dsui_1530 and Dsui_1531 overlap by 4 nucleotides Dsui_1531 and Dsui_1532 are separated by 146 nucleotides
Dsui_1529: Dsui_1529 - response regulator with CheY-like receiver domain and winged-helix DNA-binding domain, at 1,591,298 to 1,592,008
_1529
Dsui_1530: Dsui_1530 - hypothetical protein, at 1,592,040 to 1,592,327
_1530
Dsui_1531: Dsui_1531 - PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein, at 1,592,324 to 1,594,537
_1531
Dsui_1532: Dsui_1532 - fatty-acid desaturase, at 1,594,684 to 1,595,898
_1532
Position (kb)
1592
1593
1594
1595 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 1591.352 kb on - strand at 1591.401 kb on - strand at 1591.420 kb on + strand at 1591.475 kb on - strand, within Dsui_1529 at 1591.503 kb on + strand, within Dsui_1529 at 1591.726 kb on + strand, within Dsui_1529 at 1591.772 kb on + strand, within Dsui_1529 at 1591.797 kb on - strand, within Dsui_1529 at 1591.806 kb on + strand at 1591.809 kb on + strand, within Dsui_1529 at 1591.814 kb on - strand, within Dsui_1529 at 1591.824 kb on - strand, within Dsui_1529 at 1592.128 kb on + strand at 1592.216 kb on + strand, within Dsui_1530 at 1592.216 kb on + strand, within Dsui_1530 at 1592.224 kb on - strand, within Dsui_1530 at 1592.307 kb on + strand at 1592.368 kb on - strand at 1592.598 kb on + strand at 1592.712 kb on - strand, within Dsui_1531 at 1592.947 kb on + strand at 1592.982 kb on + strand, within Dsui_1531 at 1592.985 kb on - strand, within Dsui_1531 at 1593.057 kb on - strand, within Dsui_1531 at 1593.086 kb on - strand at 1593.142 kb on - strand, within Dsui_1531 at 1593.171 kb on - strand, within Dsui_1531 at 1593.203 kb on + strand at 1593.211 kb on - strand, within Dsui_1531 at 1593.265 kb on + strand, within Dsui_1531 at 1593.326 kb on - strand, within Dsui_1531 at 1593.370 kb on + strand, within Dsui_1531 at 1593.378 kb on - strand, within Dsui_1531 at 1593.416 kb on - strand, within Dsui_1531 at 1593.468 kb on + strand, within Dsui_1531 at 1593.517 kb on + strand at 1593.525 kb on - strand, within Dsui_1531 at 1593.525 kb on - strand, within Dsui_1531 at 1593.534 kb on - strand, within Dsui_1531 at 1593.549 kb on - strand, within Dsui_1531 at 1593.579 kb on + strand at 1593.623 kb on - strand, within Dsui_1531 at 1593.720 kb on - strand, within Dsui_1531 at 1593.722 kb on + strand at 1593.727 kb on + strand, within Dsui_1531 at 1593.730 kb on - strand, within Dsui_1531 at 1593.735 kb on - strand, within Dsui_1531 at 1593.765 kb on + strand at 1593.802 kb on + strand at 1593.827 kb on + strand at 1593.956 kb on + strand at 1593.965 kb on - strand, within Dsui_1531 at 1593.965 kb on - strand, within Dsui_1531 at 1594.152 kb on + strand at 1594.193 kb on + strand, within Dsui_1531 at 1594.270 kb on + strand, within Dsui_1531 at 1594.278 kb on - strand, within Dsui_1531 at 1594.278 kb on - strand, within Dsui_1531 at 1594.292 kb on - strand, within Dsui_1531 at 1594.295 kb on + strand, within Dsui_1531 at 1594.329 kb on + strand at 1594.394 kb on + strand at 1594.493 kb on - strand at 1594.493 kb on - strand at 1594.516 kb on + strand at 1594.540 kb on + strand at 1594.670 kb on + strand at 1594.683 kb on - strand at 1594.711 kb on + strand at 1594.744 kb on - strand at 1594.746 kb on + strand at 1594.751 kb on + strand at 1594.796 kb on + strand at 1594.983 kb on + strand, within Dsui_1532 at 1594.983 kb on + strand, within Dsui_1532 at 1595.033 kb on - strand, within Dsui_1532 at 1595.191 kb on + strand, within Dsui_1532 at 1595.250 kb on + strand, within Dsui_1532 at 1595.250 kb on + strand, within Dsui_1532 at 1595.258 kb on - strand, within Dsui_1532 at 1595.294 kb on + strand, within Dsui_1532 at 1595.332 kb on - strand, within Dsui_1532 at 1595.392 kb on - strand, within Dsui_1532 at 1595.429 kb on + strand, within Dsui_1532 at 1595.442 kb on - strand, within Dsui_1532 at 1595.501 kb on + strand, within Dsui_1532
Per-strain Table
Position Strand Gene LocusTag Fraction pyruvate (C) remove 1,591,352 - -3.3 1,591,401 - +0.7 1,591,420 + +0.7 1,591,475 - Dsui_1529 0.25 -3.1 1,591,503 + Dsui_1529 0.29 -1.6 1,591,726 + Dsui_1529 0.60 -0.9 1,591,772 + Dsui_1529 0.67 -1.3 1,591,797 - Dsui_1529 0.70 -3.1 1,591,806 + +0.7 1,591,809 + Dsui_1529 0.72 +0.7 1,591,814 - Dsui_1529 0.73 -3.8 1,591,824 - Dsui_1529 0.74 -3.5 1,592,128 + +0.7 1,592,216 + Dsui_1530 0.61 -0.3 1,592,216 + Dsui_1530 0.61 +0.7 1,592,224 - Dsui_1530 0.64 -0.9 1,592,307 + -0.9 1,592,368 - -0.3 1,592,598 + +0.7 1,592,712 - Dsui_1531 0.18 -0.3 1,592,947 + +0.7 1,592,982 + Dsui_1531 0.30 -0.2 1,592,985 - Dsui_1531 0.30 -3.5 1,593,057 - Dsui_1531 0.33 -0.9 1,593,086 - +0.7 1,593,142 - Dsui_1531 0.37 -0.3 1,593,171 - Dsui_1531 0.38 +0.7 1,593,203 + -0.3 1,593,211 - Dsui_1531 0.40 -2.6 1,593,265 + Dsui_1531 0.43 -0.9 1,593,326 - Dsui_1531 0.45 -0.3 1,593,370 + Dsui_1531 0.47 -1.9 1,593,378 - Dsui_1531 0.48 -1.6 1,593,416 - Dsui_1531 0.49 -0.9 1,593,468 + Dsui_1531 0.52 -1.3 1,593,517 + +0.7 1,593,525 - Dsui_1531 0.54 -2.8 1,593,525 - Dsui_1531 0.54 +0.7 1,593,534 - Dsui_1531 0.55 -0.9 1,593,549 - Dsui_1531 0.55 -0.6 1,593,579 + +0.7 1,593,623 - Dsui_1531 0.59 -1.9 1,593,720 - Dsui_1531 0.63 -1.3 1,593,722 + -0.3 1,593,727 + Dsui_1531 0.63 -0.3 1,593,730 - Dsui_1531 0.64 -0.3 1,593,735 - Dsui_1531 0.64 -0.8 1,593,765 + +0.7 1,593,802 + +0.7 1,593,827 + +0.7 1,593,956 + +0.7 1,593,965 - Dsui_1531 0.74 -0.9 1,593,965 - Dsui_1531 0.74 -2.8 1,594,152 + +0.7 1,594,193 + Dsui_1531 0.84 -1.6 1,594,270 + Dsui_1531 0.88 +0.4 1,594,278 - Dsui_1531 0.88 -1.2 1,594,278 - Dsui_1531 0.88 -0.9 1,594,292 - Dsui_1531 0.89 -1.8 1,594,295 + Dsui_1531 0.89 -0.2 1,594,329 + +0.1 1,594,394 + -0.1 1,594,493 - +0.4 1,594,493 - +0.7 1,594,516 + -0.9 1,594,540 + -0.3 1,594,670 + -0.2 1,594,683 - -0.3 1,594,711 + -0.2 1,594,744 - +0.7 1,594,746 + -0.1 1,594,751 + -0.3 1,594,796 + -0.3 1,594,983 + Dsui_1532 0.25 -0.5 1,594,983 + Dsui_1532 0.25 -0.3 1,595,033 - Dsui_1532 0.29 -1.3 1,595,191 + Dsui_1532 0.42 -0.3 1,595,250 + Dsui_1532 0.47 -0.0 1,595,250 + Dsui_1532 0.47 +0.1 1,595,258 - Dsui_1532 0.47 -0.3 1,595,294 + Dsui_1532 0.50 -0.4 1,595,332 - Dsui_1532 0.53 +0.7 1,595,392 - Dsui_1532 0.58 -0.3 1,595,429 + Dsui_1532 0.61 -0.6 1,595,442 - Dsui_1532 0.62 -0.3 1,595,501 + Dsui_1532 0.67 -0.4
Or see this region's nucleotide sequence