Strain Fitness in Dechlorosoma suillum PS around Dsui_1468

Experiment: pyruvate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_1467 and Dsui_1468 are separated by 48 nucleotidesDsui_1468 and Dsui_1469 are separated by 211 nucleotidesDsui_1469 and Dsui_1470 are separated by 78 nucleotides Dsui_1467: Dsui_1467 - ABC-type transport system, involved in lipoprotein release, permease component, at 1,530,008 to 1,531,186 _1467 Dsui_1468: Dsui_1468 - hypothetical protein, at 1,531,235 to 1,532,614 _1468 Dsui_1469: Dsui_1469 - L-aspartate-alpha-decarboxylase, at 1,532,826 to 1,533,206 _1469 Dsui_1470: Dsui_1470 - pantoate--beta-alanine ligase, at 1,533,285 to 1,534,109 _1470 Position (kb) 1531 1532 1533Strain fitness (log2 ratio) -2 -1 0 1 2at 1530.393 kb on + strand, within Dsui_1467at 1530.537 kb on + strand, within Dsui_1467at 1530.545 kb on - strand, within Dsui_1467at 1530.545 kb on - strand, within Dsui_1467at 1530.586 kb on + strand, within Dsui_1467at 1530.595 kb on - strand, within Dsui_1467at 1530.742 kb on + strand, within Dsui_1467at 1530.750 kb on - strand, within Dsui_1467at 1530.775 kb on + strand, within Dsui_1467at 1530.800 kb on - strand, within Dsui_1467at 1530.880 kb on + strand, within Dsui_1467at 1530.904 kb on - strandat 1530.996 kb on - strand, within Dsui_1467at 1531.006 kb on - strandat 1531.056 kb on + strand, within Dsui_1467at 1531.113 kb on - strandat 1531.145 kb on - strandat 1531.190 kb on + strandat 1531.197 kb on + strandat 1531.197 kb on + strandat 1531.293 kb on + strandat 1531.384 kb on + strand, within Dsui_1468at 1531.433 kb on - strand, within Dsui_1468at 1531.561 kb on + strand, within Dsui_1468at 1531.650 kb on + strand, within Dsui_1468at 1531.650 kb on + strand, within Dsui_1468at 1531.650 kb on + strand, within Dsui_1468at 1531.650 kb on + strand, within Dsui_1468at 1531.650 kb on + strand, within Dsui_1468at 1531.650 kb on + strand, within Dsui_1468at 1531.650 kb on + strand, within Dsui_1468at 1531.650 kb on + strand, within Dsui_1468at 1531.650 kb on + strand, within Dsui_1468at 1531.653 kb on - strand, within Dsui_1468at 1531.658 kb on - strand, within Dsui_1468at 1531.658 kb on - strand, within Dsui_1468at 1531.658 kb on - strand, within Dsui_1468at 1531.861 kb on + strand, within Dsui_1468at 1531.861 kb on + strand, within Dsui_1468at 1531.899 kb on - strand, within Dsui_1468at 1531.909 kb on + strand, within Dsui_1468at 1531.912 kb on - strand, within Dsui_1468at 1532.481 kb on - strandat 1532.557 kb on + strandat 1532.565 kb on - strandat 1532.657 kb on - strandat 1532.731 kb on + strandat 1532.736 kb on + strandat 1532.744 kb on - strandat 1532.790 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction pyruvate (C)
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1,530,393 + Dsui_1467 0.33 -0.9
1,530,537 + Dsui_1467 0.45 -0.7
1,530,545 - Dsui_1467 0.46 -0.9
1,530,545 - Dsui_1467 0.46 -0.3
1,530,586 + Dsui_1467 0.49 +2.1
1,530,595 - Dsui_1467 0.50 -0.9
1,530,742 + Dsui_1467 0.62 -0.9
1,530,750 - Dsui_1467 0.63 -0.9
1,530,775 + Dsui_1467 0.65 -1.4
1,530,800 - Dsui_1467 0.67 -1.9
1,530,880 + Dsui_1467 0.74 -0.5
1,530,904 - +0.7
1,530,996 - Dsui_1467 0.84 -1.3
1,531,006 - +0.7
1,531,056 + Dsui_1467 0.89 +0.1
1,531,113 - -1.3
1,531,145 - -0.3
1,531,190 + -1.9
1,531,197 + +0.5
1,531,197 + -0.9
1,531,293 + -0.1
1,531,384 + Dsui_1468 0.11 -0.1
1,531,433 - Dsui_1468 0.14 -2.5
1,531,561 + Dsui_1468 0.24 -0.6
1,531,650 + Dsui_1468 0.30 -0.6
1,531,650 + Dsui_1468 0.30 +0.2
1,531,650 + Dsui_1468 0.30 -0.2
1,531,650 + Dsui_1468 0.30 -0.1
1,531,650 + Dsui_1468 0.30 -0.5
1,531,650 + Dsui_1468 0.30 +0.3
1,531,650 + Dsui_1468 0.30 +0.0
1,531,650 + Dsui_1468 0.30 +0.4
1,531,650 + Dsui_1468 0.30 -0.6
1,531,653 - Dsui_1468 0.30 -0.3
1,531,658 - Dsui_1468 0.31 -1.3
1,531,658 - Dsui_1468 0.31 -0.9
1,531,658 - Dsui_1468 0.31 -0.9
1,531,861 + Dsui_1468 0.45 -1.2
1,531,861 + Dsui_1468 0.45 -0.1
1,531,899 - Dsui_1468 0.48 -0.3
1,531,909 + Dsui_1468 0.49 -0.3
1,531,912 - Dsui_1468 0.49 -0.9
1,532,481 - -1.3
1,532,557 + -0.4
1,532,565 - -1.3
1,532,657 - -0.2
1,532,731 + -0.3
1,532,736 + +0.1
1,532,744 - -0.5
1,532,790 + -0.3

Or see this region's nucleotide sequence