Experiment: pyruvate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1407 and Dsui_1408 are separated by 134 nucleotides Dsui_1408 and Dsui_1409 are separated by 24 nucleotides
Dsui_1407: Dsui_1407 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase, at 1,464,749 to 1,466,002
_1407
Dsui_1408: Dsui_1408 - NifZ domain-containing protein, at 1,466,137 to 1,466,406
_1408
Dsui_1409: Dsui_1409 - cation diffusion facilitator family transporter, at 1,466,431 to 1,467,318
_1409
Position (kb)
1466
1467 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1466.127 kb on + strand at 1466.142 kb on - strand at 1466.365 kb on + strand, within Dsui_1408 at 1466.384 kb on - strand at 1466.429 kb on + strand at 1466.436 kb on - strand at 1466.492 kb on - strand at 1466.504 kb on + strand at 1466.512 kb on - strand at 1466.531 kb on + strand, within Dsui_1409 at 1466.586 kb on + strand at 1466.631 kb on + strand, within Dsui_1409 at 1466.700 kb on + strand at 1466.714 kb on + strand, within Dsui_1409 at 1466.811 kb on + strand at 1466.819 kb on - strand, within Dsui_1409 at 1466.985 kb on - strand, within Dsui_1409 at 1467.106 kb on - strand, within Dsui_1409 at 1467.134 kb on - strand, within Dsui_1409 at 1467.152 kb on + strand, within Dsui_1409 at 1467.160 kb on - strand, within Dsui_1409 at 1467.244 kb on + strand at 1467.322 kb on - strand at 1467.324 kb on + strand at 1467.324 kb on + strand at 1467.324 kb on + strand at 1467.332 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction pyruvate (C) remove 1,466,127 + +0.6 1,466,142 - -1.4 1,466,365 + Dsui_1408 0.84 -2.4 1,466,384 - -0.7 1,466,429 + -1.4 1,466,436 - -1.9 1,466,492 - -3.1 1,466,504 + -1.7 1,466,512 - -0.9 1,466,531 + Dsui_1409 0.11 -0.9 1,466,586 + +0.6 1,466,631 + Dsui_1409 0.23 -0.9 1,466,700 + +0.6 1,466,714 + Dsui_1409 0.32 -0.9 1,466,811 + +0.6 1,466,819 - Dsui_1409 0.44 -0.4 1,466,985 - Dsui_1409 0.62 -0.9 1,467,106 - Dsui_1409 0.76 +0.6 1,467,134 - Dsui_1409 0.79 -1.4 1,467,152 + Dsui_1409 0.81 -0.4 1,467,160 - Dsui_1409 0.82 -0.5 1,467,244 + +0.6 1,467,322 - -0.4 1,467,324 + +0.6 1,467,324 + +0.6 1,467,324 + -2.8 1,467,332 - -1.7
Or see this region's nucleotide sequence