Experiment: pyruvate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0980 and Dsui_0981 are separated by 20 nucleotides Dsui_0981 and Dsui_0982 are separated by 63 nucleotides
Dsui_0980: Dsui_0980 - acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta), at 1,006,300 to 1,007,907
_0980
Dsui_0981: Dsui_0981 - enoyl-CoA hydratase/carnithine racemase, at 1,007,928 to 1,008,719
_0981
Dsui_0982: Dsui_0982 - acetyl/propionyl-CoA carboxylase, alpha subunit, at 1,008,783 to 1,010,786
_0982
Position (kb)
1007
1008
1009 Strain fitness (log2 ratio)
-2
-1
0
1 at 1007.432 kb on + strand, within Dsui_0980 at 1007.530 kb on - strand, within Dsui_0980 at 1007.654 kb on - strand, within Dsui_0980 at 1007.751 kb on + strand at 1007.790 kb on + strand at 1008.053 kb on + strand, within Dsui_0981 at 1008.084 kb on - strand, within Dsui_0981 at 1008.613 kb on + strand, within Dsui_0981 at 1008.637 kb on - strand, within Dsui_0981 at 1008.927 kb on + strand at 1009.031 kb on - strand, within Dsui_0982 at 1009.295 kb on + strand at 1009.318 kb on - strand at 1009.385 kb on + strand, within Dsui_0982 at 1009.476 kb on - strand, within Dsui_0982 at 1009.486 kb on + strand, within Dsui_0982 at 1009.646 kb on + strand, within Dsui_0982 at 1009.703 kb on - strand at 1009.704 kb on - strand, within Dsui_0982
Per-strain Table
Position Strand Gene LocusTag Fraction pyruvate (C) remove 1,007,432 + Dsui_0980 0.70 -1.3 1,007,530 - Dsui_0980 0.76 -0.2 1,007,654 - Dsui_0980 0.84 +0.8 1,007,751 + -1.2 1,007,790 + -1.4 1,008,053 + Dsui_0981 0.16 -0.1 1,008,084 - Dsui_0981 0.20 -2.0 1,008,613 + Dsui_0981 0.86 -1.7 1,008,637 - Dsui_0981 0.90 -0.2 1,008,927 + -0.2 1,009,031 - Dsui_0982 0.12 -1.2 1,009,295 + -0.8 1,009,318 - +0.8 1,009,385 + Dsui_0982 0.30 -1.2 1,009,476 - Dsui_0982 0.35 -0.2 1,009,486 + Dsui_0982 0.35 +0.8 1,009,646 + Dsui_0982 0.43 -1.2 1,009,703 - +0.8 1,009,704 - Dsui_0982 0.46 -1.2
Or see this region's nucleotide sequence