Strain Fitness in Dechlorosoma suillum PS around Dsui_0974

Experiment: pyruvate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_0972 and Dsui_0973 are separated by 236 nucleotidesDsui_0973 and Dsui_0974 are separated by 85 nucleotidesDsui_0974 and Dsui_0975 are separated by 150 nucleotides Dsui_0972: Dsui_0972 - Zn-dependent hydrolase, glyoxylase, at 998,688 to 999,722 _0972 Dsui_0973: Dsui_0973 - putative transcriptional regulator, at 999,959 to 1,000,429 _0973 Dsui_0974: Dsui_0974 - hypothetical protein, at 1,000,515 to 1,000,979 _0974 Dsui_0975: Dsui_0975 - acyl-CoA dehydrogenase, at 1,001,130 to 1,002,302 _0975 Position (kb) 1000 1001Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 999.632 kb on - strandat 999.635 kb on + strandat 999.643 kb on - strandat 999.662 kb on + strandat 999.670 kb on - strandat 999.676 kb on - strandat 999.724 kb on + strandat 999.728 kb on + strandat 999.728 kb on + strandat 999.728 kb on + strandat 999.736 kb on - strandat 999.811 kb on + strandat 999.834 kb on - strandat 999.899 kb on + strandat 999.989 kb on + strandat 1000.006 kb on - strand, within Dsui_0973at 1000.031 kb on - strandat 1000.046 kb on - strand, within Dsui_0973at 1000.069 kb on + strand, within Dsui_0973at 1000.119 kb on - strand, within Dsui_0973at 1000.119 kb on - strand, within Dsui_0973at 1000.172 kb on - strand, within Dsui_0973at 1000.230 kb on - strand, within Dsui_0973at 1000.308 kb on - strand, within Dsui_0973at 1000.363 kb on + strand, within Dsui_0973at 1000.383 kb on - strandat 1000.682 kb on + strand, within Dsui_0974at 1000.806 kb on + strand, within Dsui_0974at 1000.904 kb on + strand, within Dsui_0974at 1000.919 kb on - strand, within Dsui_0974at 1000.974 kb on + strandat 1000.982 kb on - strandat 1001.049 kb on - strandat 1001.049 kb on - strandat 1001.049 kb on - strandat 1001.069 kb on + strandat 1001.083 kb on + strandat 1001.091 kb on - strandat 1001.101 kb on - strandat 1001.151 kb on - strandat 1001.180 kb on + strandat 1001.213 kb on - strandat 1001.234 kb on + strandat 1001.331 kb on + strand, within Dsui_0975at 1001.331 kb on + strand, within Dsui_0975at 1001.339 kb on - strandat 1001.351 kb on + strand, within Dsui_0975at 1001.421 kb on - strand, within Dsui_0975at 1001.466 kb on + strand, within Dsui_0975at 1001.516 kb on - strand, within Dsui_0975at 1001.566 kb on - strand, within Dsui_0975at 1001.578 kb on - strand, within Dsui_0975at 1001.651 kb on + strand, within Dsui_0975at 1001.746 kb on + strand, within Dsui_0975at 1001.770 kb on + strand, within Dsui_0975at 1001.954 kb on + strand, within Dsui_0975

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Per-strain Table

Position Strand Gene LocusTag Fraction pyruvate (C)
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999,632 - +1.8
999,635 + +1.8
999,643 - +1.8
999,662 + +0.8
999,670 - -0.2
999,676 - -0.2
999,724 + -1.5
999,728 + -1.2
999,728 + +0.8
999,728 + -0.2
999,736 - -1.8
999,811 + -2.8
999,834 - +0.8
999,899 + +0.8
999,989 + -0.4
1,000,006 - Dsui_0973 0.10 -0.2
1,000,031 - +0.8
1,000,046 - Dsui_0973 0.18 -1.5
1,000,069 + Dsui_0973 0.23 -0.8
1,000,119 - Dsui_0973 0.34 +0.8
1,000,119 - Dsui_0973 0.34 -1.2
1,000,172 - Dsui_0973 0.45 +0.8
1,000,230 - Dsui_0973 0.58 -1.2
1,000,308 - Dsui_0973 0.74 -0.8
1,000,363 + Dsui_0973 0.86 -0.2
1,000,383 - +0.8
1,000,682 + Dsui_0974 0.36 -1.5
1,000,806 + Dsui_0974 0.63 -0.2
1,000,904 + Dsui_0974 0.84 -1.2
1,000,919 - Dsui_0974 0.87 -0.2
1,000,974 + -0.8
1,000,982 - +0.8
1,001,049 - +0.8
1,001,049 - +0.8
1,001,049 - -0.2
1,001,069 + -1.2
1,001,083 + -0.8
1,001,091 - -0.8
1,001,101 - -0.2
1,001,151 - +0.8
1,001,180 + -0.8
1,001,213 - -0.8
1,001,234 + -0.2
1,001,331 + Dsui_0975 0.17 -1.2
1,001,331 + Dsui_0975 0.17 -1.2
1,001,339 - +0.8
1,001,351 + Dsui_0975 0.19 -1.8
1,001,421 - Dsui_0975 0.25 +0.8
1,001,466 + Dsui_0975 0.29 -1.5
1,001,516 - Dsui_0975 0.33 +0.8
1,001,566 - Dsui_0975 0.37 -2.4
1,001,578 - Dsui_0975 0.38 -0.2
1,001,651 + Dsui_0975 0.44 -0.2
1,001,746 + Dsui_0975 0.53 +0.8
1,001,770 + Dsui_0975 0.55 +2.4
1,001,954 + Dsui_0975 0.70 -0.0

Or see this region's nucleotide sequence