Experiment: pyruvate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0780 and Dsui_0781 are separated by 161 nucleotides Dsui_0781 and Dsui_0782 are separated by 106 nucleotides
Dsui_0780: Dsui_0780 - acetoacetyl-CoA reductase, at 787,439 to 788,176
_0780
Dsui_0781: Dsui_0781 - putative ferric reductase, at 788,338 to 789,702
_0781
Dsui_0782: Dsui_0782 - N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form, at 789,809 to 790,768
_0782
Position (kb)
788
789
790 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 787.344 kb on + strand at 787.353 kb on - strand at 787.379 kb on - strand at 787.397 kb on - strand at 787.403 kb on + strand at 787.443 kb on + strand at 787.510 kb on - strand at 787.518 kb on + strand, within Dsui_0780 at 787.526 kb on - strand, within Dsui_0780 at 787.526 kb on - strand, within Dsui_0780 at 787.583 kb on + strand, within Dsui_0780 at 787.583 kb on + strand, within Dsui_0780 at 787.583 kb on + strand, within Dsui_0780 at 787.588 kb on + strand at 787.588 kb on + strand, within Dsui_0780 at 787.588 kb on + strand, within Dsui_0780 at 787.588 kb on + strand, within Dsui_0780 at 787.596 kb on - strand, within Dsui_0780 at 787.604 kb on - strand, within Dsui_0780 at 787.606 kb on - strand, within Dsui_0780 at 787.665 kb on - strand, within Dsui_0780 at 787.665 kb on - strand, within Dsui_0780 at 787.665 kb on - strand, within Dsui_0780 at 787.743 kb on - strand, within Dsui_0780 at 787.769 kb on + strand, within Dsui_0780 at 787.769 kb on + strand, within Dsui_0780 at 787.779 kb on - strand, within Dsui_0780 at 787.810 kb on + strand, within Dsui_0780 at 787.870 kb on - strand, within Dsui_0780 at 787.883 kb on - strand, within Dsui_0780 at 787.894 kb on - strand, within Dsui_0780 at 787.944 kb on - strand, within Dsui_0780 at 787.966 kb on + strand, within Dsui_0780 at 787.983 kb on - strand, within Dsui_0780 at 788.019 kb on + strand, within Dsui_0780 at 788.069 kb on + strand, within Dsui_0780 at 788.096 kb on - strand, within Dsui_0780 at 788.144 kb on - strand at 788.179 kb on - strand at 788.193 kb on + strand at 788.201 kb on - strand at 788.201 kb on - strand at 788.201 kb on - strand at 788.201 kb on - strand at 788.206 kb on - strand at 788.259 kb on - strand at 788.300 kb on - strand at 788.354 kb on - strand at 788.371 kb on + strand at 788.373 kb on - strand at 788.380 kb on - strand at 788.423 kb on - strand at 788.463 kb on - strand at 788.463 kb on - strand at 788.469 kb on + strand at 788.483 kb on - strand, within Dsui_0781 at 788.486 kb on + strand, within Dsui_0781 at 788.486 kb on + strand, within Dsui_0781 at 788.533 kb on - strand, within Dsui_0781 at 788.538 kb on + strand at 788.551 kb on + strand, within Dsui_0781 at 788.591 kb on + strand, within Dsui_0781 at 788.599 kb on - strand, within Dsui_0781 at 788.599 kb on - strand, within Dsui_0781 at 788.713 kb on - strand, within Dsui_0781 at 788.718 kb on + strand, within Dsui_0781 at 788.842 kb on - strand at 788.882 kb on + strand, within Dsui_0781 at 788.890 kb on - strand, within Dsui_0781 at 788.896 kb on + strand, within Dsui_0781 at 788.899 kb on + strand, within Dsui_0781 at 788.909 kb on + strand, within Dsui_0781 at 789.059 kb on + strand at 789.099 kb on + strand, within Dsui_0781 at 789.159 kb on + strand, within Dsui_0781 at 789.234 kb on + strand, within Dsui_0781 at 789.302 kb on - strand at 789.304 kb on + strand, within Dsui_0781 at 789.312 kb on - strand, within Dsui_0781 at 789.312 kb on - strand at 789.425 kb on + strand, within Dsui_0781 at 789.433 kb on - strand, within Dsui_0781 at 789.435 kb on + strand, within Dsui_0781 at 789.448 kb on + strand, within Dsui_0781 at 789.463 kb on - strand at 789.651 kb on - strand at 789.657 kb on - strand at 789.657 kb on - strand at 789.657 kb on - strand at 789.657 kb on - strand at 789.704 kb on + strand at 789.706 kb on + strand at 789.753 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction pyruvate (C) remove 787,344 + +0.0 787,353 - -1.2 787,379 - -0.8 787,397 - +0.8 787,403 + -0.1 787,443 + -0.2 787,510 - -0.8 787,518 + Dsui_0780 0.11 -2.4 787,526 - Dsui_0780 0.12 -0.2 787,526 - Dsui_0780 0.12 -1.2 787,583 + Dsui_0780 0.20 +0.2 787,583 + Dsui_0780 0.20 -1.5 787,583 + Dsui_0780 0.20 -0.2 787,588 + +0.8 787,588 + Dsui_0780 0.20 -0.9 787,588 + Dsui_0780 0.20 +0.5 787,588 + Dsui_0780 0.20 +0.8 787,596 - Dsui_0780 0.21 -1.5 787,604 - Dsui_0780 0.22 -1.8 787,606 - Dsui_0780 0.23 +0.8 787,665 - Dsui_0780 0.31 -0.2 787,665 - Dsui_0780 0.31 +0.8 787,665 - Dsui_0780 0.31 -0.2 787,743 - Dsui_0780 0.41 +0.8 787,769 + Dsui_0780 0.45 -0.9 787,769 + Dsui_0780 0.45 -0.4 787,779 - Dsui_0780 0.46 +0.8 787,810 + Dsui_0780 0.50 -0.2 787,870 - Dsui_0780 0.58 +0.8 787,883 - Dsui_0780 0.60 -0.8 787,894 - Dsui_0780 0.62 +0.8 787,944 - Dsui_0780 0.68 +0.8 787,966 + Dsui_0780 0.71 -3.1 787,983 - Dsui_0780 0.74 -0.8 788,019 + Dsui_0780 0.79 +0.0 788,069 + Dsui_0780 0.85 +0.9 788,096 - Dsui_0780 0.89 -0.2 788,144 - -0.2 788,179 - -0.8 788,193 + -1.5 788,201 - +0.8 788,201 - +0.8 788,201 - +0.8 788,201 - -0.2 788,206 - +0.8 788,259 - -0.2 788,300 - -1.5 788,354 - +0.8 788,371 + -3.2 788,373 - +0.8 788,380 - -1.8 788,423 - -0.2 788,463 - -1.2 788,463 - +0.8 788,469 + -0.2 788,483 - Dsui_0781 0.11 -0.2 788,486 + Dsui_0781 0.11 -1.2 788,486 + Dsui_0781 0.11 -0.8 788,533 - Dsui_0781 0.14 +0.8 788,538 + +0.8 788,551 + Dsui_0781 0.16 -1.5 788,591 + Dsui_0781 0.19 -2.4 788,599 - Dsui_0781 0.19 -0.8 788,599 - Dsui_0781 0.19 -1.2 788,713 - Dsui_0781 0.27 +0.8 788,718 + Dsui_0781 0.28 -0.8 788,842 - +0.8 788,882 + Dsui_0781 0.40 -0.2 788,890 - Dsui_0781 0.40 -1.2 788,896 + Dsui_0781 0.41 -0.8 788,899 + Dsui_0781 0.41 -0.2 788,909 + Dsui_0781 0.42 -0.2 789,059 + -0.8 789,099 + Dsui_0781 0.56 -0.2 789,159 + Dsui_0781 0.60 -0.2 789,234 + Dsui_0781 0.66 -0.2 789,302 - +0.8 789,304 + Dsui_0781 0.71 +0.8 789,312 - Dsui_0781 0.71 -1.5 789,312 - +0.8 789,425 + Dsui_0781 0.80 +0.8 789,433 - Dsui_0781 0.80 -1.5 789,435 + Dsui_0781 0.80 +0.8 789,448 + Dsui_0781 0.81 -0.8 789,463 - +0.8 789,651 - -0.8 789,657 - -0.2 789,657 - +0.8 789,657 - -0.2 789,657 - -1.2 789,704 + -0.2 789,706 + +0.1 789,753 - -1.2
Or see this region's nucleotide sequence