Experiment: pyruvate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0727 and Dsui_0728 are separated by 101 nucleotides Dsui_0728 and Dsui_0729 are separated by 142 nucleotides
Dsui_0727: Dsui_0727 - putative integral membrane protein, at 721,086 to 722,141
_0727
Dsui_0728: Dsui_0728 - threonine ammonia-lyase, biosynthetic, long form, at 722,243 to 723,754
_0728
Dsui_0729: Dsui_0729 - putative autotransporter protein,putative Ig domain-containing protein, at 723,897 to 728,669
_0729
Position (kb)
722
723
724 Strain fitness (log2 ratio)
-2
-1
0
1 at 721.244 kb on + strand, within Dsui_0727 at 721.330 kb on + strand, within Dsui_0727 at 721.358 kb on + strand at 721.397 kb on - strand, within Dsui_0727 at 721.541 kb on + strand, within Dsui_0727 at 721.807 kb on + strand, within Dsui_0727 at 721.917 kb on + strand, within Dsui_0727 at 721.926 kb on - strand, within Dsui_0727 at 721.966 kb on - strand, within Dsui_0727 at 721.977 kb on + strand, within Dsui_0727 at 722.016 kb on - strand at 722.016 kb on - strand, within Dsui_0727 at 722.061 kb on + strand at 722.074 kb on - strand at 722.208 kb on - strand at 722.208 kb on - strand at 722.208 kb on - strand at 722.563 kb on + strand at 723.804 kb on - strand at 723.883 kb on - strand at 723.920 kb on + strand at 723.920 kb on + strand at 723.926 kb on + strand at 723.926 kb on + strand at 723.926 kb on + strand at 723.926 kb on + strand at 723.964 kb on + strand at 723.974 kb on + strand at 723.990 kb on - strand at 724.045 kb on - strand at 724.092 kb on + strand at 724.164 kb on + strand at 724.242 kb on - strand at 724.497 kb on - strand, within Dsui_0729 at 724.580 kb on - strand, within Dsui_0729 at 724.632 kb on - strand, within Dsui_0729 at 724.661 kb on - strand, within Dsui_0729 at 724.709 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction pyruvate (C) remove 721,244 + Dsui_0727 0.15 -0.9 721,330 + Dsui_0727 0.23 -2.5 721,358 + +0.7 721,397 - Dsui_0727 0.29 -0.5 721,541 + Dsui_0727 0.43 -0.9 721,807 + Dsui_0727 0.68 -0.9 721,917 + Dsui_0727 0.79 -1.3 721,926 - Dsui_0727 0.80 -0.3 721,966 - Dsui_0727 0.83 -0.3 721,977 + Dsui_0727 0.84 -0.3 722,016 - +0.1 722,016 - Dsui_0727 0.88 -1.4 722,061 + +0.7 722,074 - +0.1 722,208 - +0.1 722,208 - -0.3 722,208 - -0.3 722,563 + -0.3 723,804 - +0.7 723,883 - +0.7 723,920 + -0.9 723,920 + -2.1 723,926 + -0.3 723,926 + +0.7 723,926 + -0.9 723,926 + +0.7 723,964 + +0.7 723,974 + -0.9 723,990 - -1.3 724,045 - +0.7 724,092 + -1.3 724,164 + -0.3 724,242 - -1.9 724,497 - Dsui_0729 0.13 -0.3 724,580 - Dsui_0729 0.14 -0.9 724,632 - Dsui_0729 0.15 -0.9 724,661 - Dsui_0729 0.16 -0.3 724,709 - +0.7
Or see this region's nucleotide sequence