Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02914

Experiment: PYE 0.5x 30C survival rep3 12 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE 0.5x 30C survival rep3 12 days
3,070,663	+				+0.1
3,070,671	-				-0.9
3,070,671	-				-1.2
3,070,684	+				-2.0
3,070,697	-				-0.2
3,070,700	+				+1.0
3,070,723	-				+1.3
3,070,739	+		CCNA_02913	0.15	+0.4
3,070,739	+		CCNA_02913	0.15	+0.8
3,070,739	+		CCNA_02913	0.15	-0.0
3,070,739	+		CCNA_02913	0.15	-0.7
3,070,739	+		CCNA_02913	0.15	+0.4
3,070,747	-		CCNA_02913	0.16	+2.0
3,070,748	-		CCNA_02913	0.16	+0.0
3,070,748	-		CCNA_02913	0.16	+0.6
3,070,756	+		CCNA_02913	0.18	-0.5
3,070,756	+		CCNA_02913	0.18	+0.1
3,070,764	-		CCNA_02913	0.19	+1.3
3,070,775	+		CCNA_02913	0.21	+0.3
3,070,789	-		CCNA_02913	0.24	-0.0
3,070,799	+		CCNA_02913	0.26	+0.6
3,070,812	+		CCNA_02913	0.28	+0.6
3,070,817	+		CCNA_02913	0.29	+0.9
3,070,830	-		CCNA_02913	0.31	-2.2
3,070,834	-		CCNA_02913	0.32	-1.3
3,070,834	-		CCNA_02913	0.32	-1.4
3,070,847	+		CCNA_02913	0.34	+0.2
3,070,847	+		CCNA_02913	0.34	-0.4
3,070,847	+		CCNA_02913	0.34	-0.2
3,070,854	+		CCNA_02913	0.35	+0.1
3,070,854	+		CCNA_02913	0.35	+0.4
3,070,871	+		CCNA_02913	0.39	+0.1
3,070,872	+		CCNA_02913	0.39	-0.2
3,070,879	-		CCNA_02913	0.40	-0.1
3,070,903	-		CCNA_02913	0.44	-0.1
3,070,924	+		CCNA_02913	0.48	-0.6
3,070,924	+		CCNA_02913	0.48	+1.9
3,070,932	-		CCNA_02913	0.49	-0.6
3,070,976	+		CCNA_02913	0.57	+0.3
3,070,978	-		CCNA_02913	0.58	+2.0
3,070,984	+		CCNA_02913	0.59	+0.3
3,070,984	+		CCNA_02913	0.59	+0.4
3,070,984	-		CCNA_02913	0.59	-0.2
3,070,992	-		CCNA_02913	0.60	+1.7
3,070,992	-		CCNA_02913	0.60	+1.5
3,071,005	-		CCNA_02913	0.63	-0.0
3,071,005	-		CCNA_02913	0.63	+0.8
3,071,006	+		CCNA_02913	0.63	-0.6
3,071,015	-		CCNA_02913	0.64	+0.1
3,071,033	+		CCNA_02913	0.68	+0.3
3,071,078	+		CCNA_02913	0.76	+0.3
3,071,113	+		CCNA_02913	0.82	+0.4
3,071,150	+		CCNA_02913	0.89	-0.1
3,071,212	-				-0.2
3,071,230	+				+1.3
3,071,238	-				-0.2
3,071,261	-				-1.7
3,071,286	+				+1.1
3,071,293	+				+0.6
3,071,294	-				+1.0
3,071,310	+				+0.5
3,071,318	-				+0.5
3,071,327	+				+0.1
3,071,343	+				+0.2
3,071,373	+				+0.7
3,071,381	-				+0.3
3,071,495	+				+1.0
3,071,578	+				-1.2
3,071,599	+				-0.8
3,071,599	+				-0.6
3,071,599	+				-0.2
3,071,649	+				+1.0
3,071,690	+				-0.3
3,071,702	+				-0.2
3,071,703	+				-0.5
3,071,711	-				+0.1
3,071,716	-				-0.2
3,071,716	-				+0.1
3,071,721	-				+0.6
3,071,734	+				-1.3
3,071,734	+				-0.7
3,071,742	-				+0.6
3,071,764	-				+0.6
3,071,778	-				+0.6
3,071,780	+				-0.8
3,071,788	-				+1.6
3,071,788	-				+2.0
3,071,788	-				+1.0
3,071,788	-				-0.9
3,071,791	+				-0.7
3,071,791	+				-1.1
3,071,822	-		CCNA_02914	0.11	-0.5
3,071,822	-		CCNA_02914	0.11	-0.4
3,071,833	-		CCNA_02914	0.12	-1.2
3,071,847	+		CCNA_02914	0.13	-0.7
3,071,855	-		CCNA_02914	0.13	+0.6
3,071,855	-		CCNA_02914	0.13	-1.5
3,071,861	+		CCNA_02914	0.13	-0.7
3,071,872	+		CCNA_02914	0.14	+0.4
3,071,872	+		CCNA_02914	0.14	+1.5
3,071,872	+		CCNA_02914	0.14	+0.9
3,071,872	+		CCNA_02914	0.14	+0.2
3,071,879	+		CCNA_02914	0.15	-0.6
3,071,896	+		CCNA_02914	0.16	-1.1
3,071,896	+		CCNA_02914	0.16	+0.0
3,071,902	+		CCNA_02914	0.16	+0.2
3,071,904	-		CCNA_02914	0.16	-1.7
3,071,904	-		CCNA_02914	0.16	-2.7
3,071,912	-		CCNA_02914	0.17	-0.4
3,071,940	+		CCNA_02914	0.18	-1.9
3,071,941	-		CCNA_02914	0.18	-0.2
3,071,977	+		CCNA_02914	0.21	-1.6
3,071,999	-		CCNA_02914	0.22	+0.2
3,072,002	+		CCNA_02914	0.22	+0.2
3,072,004	-		CCNA_02914	0.22	-1.9
3,072,013	+		CCNA_02914	0.23	-1.5
3,072,036	+		CCNA_02914	0.24	-1.4
3,072,055	+		CCNA_02914	0.25	-0.8
3,072,062	+		CCNA_02914	0.26	-0.2
3,072,070	-		CCNA_02914	0.26	-0.9
3,072,073	+		CCNA_02914	0.26	-1.6
3,072,082	+		CCNA_02914	0.27	+0.5
3,072,105	+		CCNA_02914	0.28	+0.3
3,072,113	-		CCNA_02914	0.29	-1.5
3,072,154	-		CCNA_02914	0.31	-0.9
3,072,161	+		CCNA_02914	0.32	+1.0
3,072,161	+		CCNA_02914	0.32	+1.6
3,072,161	+		CCNA_02914	0.32	+0.6
3,072,161	+		CCNA_02914	0.32	-1.8
3,072,161	+		CCNA_02914	0.32	-1.7
3,072,169	-		CCNA_02914	0.32	-0.2
3,072,169	-		CCNA_02914	0.32	+1.0
3,072,169	-		CCNA_02914	0.32	-1.4
3,072,197	-		CCNA_02914	0.34	+1.3
3,072,199	+		CCNA_02914	0.34	+1.2
3,072,256	+		CCNA_02914	0.38	+0.3
3,072,260	-		CCNA_02914	0.38	+0.9
3,072,265	-		CCNA_02914	0.38	-0.6
3,072,268	+		CCNA_02914	0.38	-1.1
3,072,293	-		CCNA_02914	0.40	+1.0
3,072,298	+		CCNA_02914	0.40	-1.9
3,072,311	+		CCNA_02914	0.41	-0.2
3,072,349	-		CCNA_02914	0.43	-1.9
3,072,356	+		CCNA_02914	0.44	+1.6
3,072,358	-		CCNA_02914	0.44	+1.6
3,072,364	-		CCNA_02914	0.44	-1.8
3,072,364	-		CCNA_02914	0.44	+2.6
3,072,373	+		CCNA_02914	0.45	-0.5
3,072,373	+		CCNA_02914	0.45	+0.7
3,072,381	-		CCNA_02914	0.45	+1.0
3,072,381	-		CCNA_02914	0.45	-0.2
3,072,381	-		CCNA_02914	0.45	-0.4
3,072,381	-		CCNA_02914	0.45	+2.6
3,072,427	+		CCNA_02914	0.48	-1.6
3,072,464	+		CCNA_02914	0.50	-1.7
3,072,464	+		CCNA_02914	0.50	-0.4
3,072,473	+		CCNA_02914	0.51	+1.2
3,072,524	-		CCNA_02914	0.54	+0.1
3,072,578	+		CCNA_02914	0.57	-0.6
3,072,598	-		CCNA_02914	0.59	+0.6
3,072,632	+		CCNA_02914	0.61	-0.8
3,072,644	+		CCNA_02914	0.61	-0.3
3,072,706	-		CCNA_02914	0.65	+1.2
3,072,713	-		CCNA_02914	0.66	-1.0
3,072,719	-		CCNA_02914	0.66	-1.4
3,072,719	-		CCNA_02914	0.66	-0.6
3,072,734	+		CCNA_02914	0.67	-0.6
3,072,757	-		CCNA_02914	0.68	-1.9
3,072,811	+		CCNA_02914	0.72	+0.0
3,072,823	+		CCNA_02914	0.72	-1.5
3,072,823	+		CCNA_02914	0.72	-1.4
3,072,859	+		CCNA_02914	0.75	-0.2
3,072,872	+		CCNA_02914	0.75	-1.0
3,072,877	+		CCNA_02914	0.76	+0.4
3,072,877	+		CCNA_02914	0.76	-1.7
3,072,877	+		CCNA_02914	0.76	+0.3
3,072,877	+		CCNA_02914	0.76	-2.4
3,072,877	+		CCNA_02914	0.76	-2.7
3,072,885	-		CCNA_02914	0.76	-1.4
3,072,885	-		CCNA_02914	0.76	-0.0
3,072,885	-		CCNA_02914	0.76	-1.2
3,072,900	+		CCNA_02914	0.77	-0.9
3,072,900	+		CCNA_02914	0.77	-0.8
3,072,927	+		CCNA_02914	0.79	-1.8
3,072,998	+		CCNA_02914	0.83	+0.0
3,073,033	+		CCNA_02914	0.85	-1.6
3,073,122	-				+0.6
3,073,139	+				-0.8
3,073,153	+				+0.2
3,073,157	+				-0.1
3,073,177	+				-2.5
3,073,178	+				+1.8
3,073,186	-				+1.6
3,073,200	-				+1.0
3,073,200	-				-0.0
3,073,246	+				-0.7
3,073,254	-				-0.0
3,073,267	+				-1.9
3,073,269	+				-0.1
3,073,275	-				-0.4
3,073,291	+				+0.3
3,073,328	+				-0.3
3,073,348	-				+0.8
3,073,356	-				-1.2
3,073,363	+				+0.4
3,073,363	+				+0.3
3,073,373	+				-0.1
3,073,398	-				+2.6
3,073,412	+				-0.7
3,073,412	+				+0.2
3,073,417	+				+0.4
3,073,420	-				-0.4
3,073,420	-				-1.1
3,073,432	-		CCNA_02915	0.10	+0.6
3,073,449	-		CCNA_02915	0.12	+0.6
3,073,462	-		CCNA_02915	0.13	+0.6
3,073,486	+		CCNA_02915	0.14	-0.2
3,073,494	-		CCNA_02915	0.15	-0.0
3,073,504	-		CCNA_02915	0.16	+2.6
3,073,504	-		CCNA_02915	0.16	-0.4
3,073,523	+		CCNA_02915	0.17	-0.4
3,073,523	+		CCNA_02915	0.17	-0.8
3,073,523	+		CCNA_02915	0.17	-1.9
3,073,523	+		CCNA_02915	0.17	-0.2
3,073,523	+		CCNA_02915	0.17	+0.2
3,073,523	+		CCNA_02915	0.17	+1.6
3,073,523	+		CCNA_02915	0.17	+0.3
3,073,523	+		CCNA_02915	0.17	+0.6
3,073,531	-		CCNA_02915	0.18	-0.2
3,073,531	-		CCNA_02915	0.18	+0.2
3,073,531	-		CCNA_02915	0.18	-2.0
3,073,531	-		CCNA_02915	0.18	+1.0
3,073,531	-		CCNA_02915	0.18	+0.6
3,073,531	-		CCNA_02915	0.18	-2.3
3,073,531	-		CCNA_02915	0.18	+0.2
3,073,531	-		CCNA_02915	0.18	-2.4
3,073,531	-		CCNA_02915	0.18	+1.6
3,073,531	-		CCNA_02915	0.18	+0.2
3,073,531	-				-0.8
3,073,531	-		CCNA_02915	0.18	+0.3
3,073,531	-		CCNA_02915	0.18	-2.0
3,073,553	+		CCNA_02915	0.19	-0.6
3,073,553	+		CCNA_02915	0.19	-1.3
3,073,566	-		CCNA_02915	0.20	+1.0
3,073,568	+		CCNA_02915	0.21	+0.5
3,073,607	-		CCNA_02915	0.24	+0.2
3,073,623	+		CCNA_02915	0.25	-2.3
3,073,630	-		CCNA_02915	0.25	-0.0
3,073,651	+		CCNA_02915	0.27	-0.6
3,073,651	-		CCNA_02915	0.27	-1.1
3,073,656	+		CCNA_02915	0.27	-0.8
3,073,656	+		CCNA_02915	0.27	-0.4
3,073,656	+		CCNA_02915	0.27	-0.9
3,073,656	+		CCNA_02915	0.27	+0.6
3,073,664	-		CCNA_02915	0.28	+0.3
3,073,664	-		CCNA_02915	0.28	-0.0
3,073,664	-		CCNA_02915	0.28	+2.6
3,073,664	-		CCNA_02915	0.28	+1.6
3,073,664	-		CCNA_02915	0.28	-1.9
3,073,664	-		CCNA_02915	0.28	+1.4
3,073,664	-		CCNA_02915	0.28	+0.2
3,073,684	+		CCNA_02915	0.29	+1.0
3,073,730	+		CCNA_02915	0.33	-1.0
3,073,750	-		CCNA_02915	0.34	-0.4
3,073,768	+		CCNA_02915	0.36	+0.0
3,073,803	+		CCNA_02915	0.38	-0.0
3,073,808	+		CCNA_02915	0.39	-0.7
3,073,808	+		CCNA_02915	0.39	+0.2
3,073,808	+				+1.6
3,073,812	+		CCNA_02915	0.39	-1.1
3,073,813	+		CCNA_02915	0.39	+2.6
3,073,813	+		CCNA_02915	0.39	+0.5
3,073,813	+		CCNA_02915	0.39	+1.6
3,073,813	+		CCNA_02915	0.39	+0.3
3,073,815	-		CCNA_02915	0.39	+0.6
3,073,816	-		CCNA_02915	0.39	-0.5
3,073,821	-		CCNA_02915	0.40	-0.2
3,073,821	-		CCNA_02915	0.40	-1.4
3,073,821	-		CCNA_02915	0.40	-0.2
3,073,821	-		CCNA_02915	0.40	-1.2
3,073,821	-		CCNA_02915	0.40	-0.2
3,073,821	-		CCNA_02915	0.40	-1.2
3,073,825	+		CCNA_02915	0.40	-2.4
3,073,832	+		CCNA_02915	0.40	+0.9
3,073,844	+		CCNA_02915	0.41	-0.3
3,073,849	+		CCNA_02915	0.42	-1.0
3,073,849	+		CCNA_02915	0.42	-0.3
3,073,853	-		CCNA_02915	0.42	-1.5
3,073,860	+		CCNA_02915	0.43	-0.0
3,073,862	-		CCNA_02915	0.43	+1.6
3,073,868	+		CCNA_02915	0.43	+0.8
3,073,868	+		CCNA_02915	0.43	-0.7
3,073,868	+		CCNA_02915	0.43	-0.4
3,073,874	-		CCNA_02915	0.44	+2.6
3,073,874	-		CCNA_02915	0.44	-3.2
3,073,876	-		CCNA_02915	0.44	-1.7
3,073,876	-		CCNA_02915	0.44	+0.4
3,073,876	-		CCNA_02915	0.44	-0.2
3,073,881	-		CCNA_02915	0.44	+0.2
3,073,884	+		CCNA_02915	0.44	+0.4
3,073,884	+		CCNA_02915	0.44	-0.4
3,073,884	+		CCNA_02915	0.44	-0.3
3,073,892	-		CCNA_02915	0.45	+0.4
3,073,924	+		CCNA_02915	0.47	-0.2
3,073,932	-		CCNA_02915	0.48	-1.3
3,073,942	+		CCNA_02915	0.49	-1.3
3,073,942	+		CCNA_02915	0.49	-1.4
3,073,950	+		CCNA_02915	0.49	+0.0
3,073,957	-		CCNA_02915	0.50	-0.2
3,073,968	-		CCNA_02915	0.51	-1.0
3,073,973	-		CCNA_02915	0.51	-3.1
3,073,973	-		CCNA_02915	0.51	-1.5
3,073,974	-		CCNA_02915	0.51	-0.5
3,073,974	-		CCNA_02915	0.51	-1.0
3,073,974	-		CCNA_02915	0.51	-0.6
3,073,981	-		CCNA_02915	0.52	-1.1
3,073,985	-		CCNA_02915	0.52	-0.6
3,073,985	-		CCNA_02915	0.52	+1.0
3,074,005	+		CCNA_02915	0.54	+0.3
3,074,008	-		CCNA_02915	0.54	-1.5
3,074,008	-		CCNA_02915	0.54	+0.9
3,074,034	+		CCNA_02915	0.56	-0.8
3,074,045	+		CCNA_02915	0.57	-1.0
3,074,053	-		CCNA_02915	0.57	+0.1
3,074,101	+		CCNA_02915	0.61	-0.3
3,074,101	+		CCNA_02915	0.61	+0.6
3,074,101	+		CCNA_02915	0.61	-1.1
3,074,101	+		CCNA_02915	0.61	-1.2
3,074,101	+		CCNA_02915	0.61	-0.2
3,074,101	+		CCNA_02915	0.61	-1.4
3,074,101	+		CCNA_02915	0.61	+1.2
3,074,101	+		CCNA_02915	0.61	+0.2
3,074,101	+		CCNA_02915	0.61	-1.3
3,074,101	+		CCNA_02915	0.61	-0.4
3,074,111	-		CCNA_02915	0.62	-0.2
3,074,111	-		CCNA_02915	0.62	+0.1
3,074,120	+		CCNA_02915	0.62	+0.6
3,074,169	-		CCNA_02915	0.66	+1.0
3,074,169	-		CCNA_02915	0.66	+0.2
3,074,170	-		CCNA_02915	0.66	-0.2
3,074,171	+		CCNA_02915	0.66	-1.0
3,074,192	-		CCNA_02915	0.68	-0.9
3,074,212	+		CCNA_02915	0.69	+2.0
3,074,212	-		CCNA_02915	0.69	-0.6
3,074,230	+		CCNA_02915	0.71	+1.4
3,074,230	+		CCNA_02915	0.71	-0.1
3,074,230	+		CCNA_02915	0.71	-0.4
3,074,244	+		CCNA_02915	0.72	-0.4
3,074,260	+		CCNA_02915	0.73	-0.0
3,074,260	+		CCNA_02915	0.73	-0.8
3,074,270	+		CCNA_02915	0.74	-0.7