Experiment: L-Threonine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS27535 and BWI76_RS27540 are separated by 13 nucleotides BWI76_RS27540 and BWI76_RS27545 are separated by 456 nucleotides
BWI76_RS27535: BWI76_RS27535 - PTS transporter subunit IIBC, at 5,714,863 to 5,716,422
_RS27535
BWI76_RS27540: BWI76_RS27540 - glycoside hydrolase, at 5,716,436 to 5,717,815
_RS27540
BWI76_RS27545: BWI76_RS27545 - sugar isomerase, at 5,718,272 to 5,719,003
_RS27545
Position (kb) 5716
5717
5718 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 5715.555 kb on + strand, within BWI76_RS27535 at 5715.555 kb on + strand, within BWI76_RS27535 at 5715.561 kb on - strand, within BWI76_RS27535 at 5715.673 kb on - strand, within BWI76_RS27535 at 5715.678 kb on - strand, within BWI76_RS27535 at 5715.715 kb on + strand, within BWI76_RS27535 at 5715.736 kb on - strand, within BWI76_RS27535 at 5715.824 kb on + strand, within BWI76_RS27535 at 5715.824 kb on + strand, within BWI76_RS27535 at 5715.832 kb on - strand, within BWI76_RS27535 at 5715.839 kb on + strand, within BWI76_RS27535 at 5715.858 kb on + strand, within BWI76_RS27535 at 5715.893 kb on - strand, within BWI76_RS27535 at 5715.905 kb on + strand, within BWI76_RS27535 at 5715.938 kb on + strand, within BWI76_RS27535 at 5715.951 kb on + strand, within BWI76_RS27535 at 5715.951 kb on - strand, within BWI76_RS27535 at 5715.962 kb on + strand, within BWI76_RS27535 at 5715.962 kb on + strand, within BWI76_RS27535 at 5715.970 kb on - strand, within BWI76_RS27535 at 5715.970 kb on - strand, within BWI76_RS27535 at 5715.970 kb on - strand, within BWI76_RS27535 at 5715.970 kb on - strand, within BWI76_RS27535 at 5716.028 kb on + strand, within BWI76_RS27535 at 5716.030 kb on - strand, within BWI76_RS27535 at 5716.036 kb on - strand, within BWI76_RS27535 at 5716.053 kb on + strand, within BWI76_RS27535 at 5716.061 kb on - strand, within BWI76_RS27535 at 5716.062 kb on + strand, within BWI76_RS27535 at 5716.064 kb on + strand, within BWI76_RS27535 at 5716.067 kb on + strand, within BWI76_RS27535 at 5716.069 kb on + strand, within BWI76_RS27535 at 5716.075 kb on - strand, within BWI76_RS27535 at 5716.076 kb on + strand, within BWI76_RS27535 at 5716.077 kb on - strand, within BWI76_RS27535 at 5716.077 kb on - strand, within BWI76_RS27535 at 5716.080 kb on + strand, within BWI76_RS27535 at 5716.082 kb on + strand, within BWI76_RS27535 at 5716.084 kb on - strand, within BWI76_RS27535 at 5716.140 kb on + strand, within BWI76_RS27535 at 5716.140 kb on + strand, within BWI76_RS27535 at 5716.140 kb on + strand, within BWI76_RS27535 at 5716.146 kb on - strand, within BWI76_RS27535 at 5716.148 kb on - strand, within BWI76_RS27535 at 5716.148 kb on - strand, within BWI76_RS27535 at 5716.148 kb on - strand, within BWI76_RS27535 at 5716.149 kb on - strand, within BWI76_RS27535 at 5716.212 kb on - strand, within BWI76_RS27535 at 5716.213 kb on - strand, within BWI76_RS27535 at 5716.218 kb on - strand, within BWI76_RS27535 at 5716.218 kb on - strand, within BWI76_RS27535 at 5716.225 kb on - strand, within BWI76_RS27535 at 5716.238 kb on - strand, within BWI76_RS27535 at 5716.248 kb on + strand, within BWI76_RS27535 at 5716.248 kb on + strand, within BWI76_RS27535 at 5716.248 kb on + strand, within BWI76_RS27535 at 5716.257 kb on - strand, within BWI76_RS27535 at 5716.257 kb on - strand, within BWI76_RS27535 at 5716.264 kb on - strand, within BWI76_RS27535 at 5716.268 kb on + strand at 5716.271 kb on - strand at 5716.280 kb on + strand at 5716.351 kb on + strand at 5716.351 kb on + strand at 5716.359 kb on - strand at 5716.373 kb on + strand at 5716.375 kb on - strand at 5716.376 kb on - strand at 5716.378 kb on + strand at 5716.381 kb on - strand at 5716.381 kb on - strand at 5716.383 kb on + strand at 5716.383 kb on + strand at 5716.383 kb on + strand at 5716.386 kb on - strand at 5716.389 kb on + strand at 5716.391 kb on - strand at 5716.391 kb on - strand at 5716.392 kb on - strand at 5716.396 kb on + strand at 5716.396 kb on + strand at 5716.396 kb on + strand at 5716.396 kb on + strand at 5716.400 kb on + strand at 5716.404 kb on - strand at 5716.404 kb on - strand at 5716.404 kb on - strand at 5716.404 kb on - strand at 5716.404 kb on - strand at 5716.448 kb on + strand at 5716.454 kb on + strand at 5716.478 kb on - strand at 5716.495 kb on + strand at 5716.508 kb on - strand at 5716.508 kb on - strand at 5716.512 kb on + strand at 5716.525 kb on - strand at 5716.538 kb on + strand at 5716.550 kb on + strand at 5716.558 kb on - strand at 5716.558 kb on - strand at 5716.591 kb on + strand, within BWI76_RS27540 at 5716.591 kb on + strand, within BWI76_RS27540 at 5716.591 kb on + strand, within BWI76_RS27540 at 5716.591 kb on + strand, within BWI76_RS27540 at 5716.591 kb on + strand, within BWI76_RS27540 at 5716.591 kb on + strand, within BWI76_RS27540 at 5716.591 kb on + strand, within BWI76_RS27540 at 5716.591 kb on + strand, within BWI76_RS27540 at 5716.591 kb on + strand, within BWI76_RS27540 at 5716.591 kb on + strand, within BWI76_RS27540 at 5716.591 kb on + strand, within BWI76_RS27540 at 5716.591 kb on + strand, within BWI76_RS27540 at 5716.591 kb on + strand, within BWI76_RS27540 at 5716.591 kb on + strand, within BWI76_RS27540 at 5716.591 kb on + strand, within BWI76_RS27540 at 5716.599 kb on - strand, within BWI76_RS27540 at 5716.599 kb on - strand, within BWI76_RS27540 at 5716.599 kb on - strand, within BWI76_RS27540 at 5716.599 kb on - strand, within BWI76_RS27540 at 5716.599 kb on - strand, within BWI76_RS27540 at 5716.599 kb on - strand, within BWI76_RS27540 at 5716.599 kb on - strand, within BWI76_RS27540 at 5716.599 kb on - strand, within BWI76_RS27540 at 5716.599 kb on - strand, within BWI76_RS27540 at 5716.599 kb on - strand, within BWI76_RS27540 at 5716.610 kb on + strand, within BWI76_RS27540 at 5716.610 kb on + strand, within BWI76_RS27540 at 5716.610 kb on + strand, within BWI76_RS27540 at 5716.613 kb on + strand, within BWI76_RS27540 at 5716.618 kb on - strand, within BWI76_RS27540 at 5716.621 kb on - strand, within BWI76_RS27540 at 5716.630 kb on - strand at 5716.635 kb on + strand, within BWI76_RS27540 at 5716.643 kb on - strand, within BWI76_RS27540 at 5716.671 kb on + strand, within BWI76_RS27540 at 5716.671 kb on + strand, within BWI76_RS27540 at 5716.677 kb on - strand, within BWI76_RS27540 at 5716.679 kb on - strand, within BWI76_RS27540 at 5716.684 kb on + strand, within BWI76_RS27540 at 5716.689 kb on + strand, within BWI76_RS27540 at 5716.707 kb on + strand, within BWI76_RS27540 at 5716.735 kb on + strand, within BWI76_RS27540 at 5716.755 kb on + strand, within BWI76_RS27540 at 5716.763 kb on - strand, within BWI76_RS27540 at 5716.820 kb on - strand, within BWI76_RS27540 at 5716.916 kb on + strand, within BWI76_RS27540 at 5716.921 kb on + strand, within BWI76_RS27540 at 5717.043 kb on + strand, within BWI76_RS27540 at 5717.051 kb on - strand, within BWI76_RS27540 at 5717.088 kb on + strand at 5717.096 kb on - strand, within BWI76_RS27540 at 5717.223 kb on + strand, within BWI76_RS27540 at 5717.315 kb on + strand, within BWI76_RS27540 at 5717.316 kb on + strand, within BWI76_RS27540 at 5717.405 kb on + strand, within BWI76_RS27540 at 5717.412 kb on + strand, within BWI76_RS27540 at 5717.420 kb on - strand, within BWI76_RS27540 at 5717.422 kb on + strand, within BWI76_RS27540 at 5717.472 kb on + strand, within BWI76_RS27540 at 5717.535 kb on - strand, within BWI76_RS27540 at 5717.574 kb on + strand, within BWI76_RS27540 at 5717.584 kb on + strand, within BWI76_RS27540 at 5717.592 kb on - strand, within BWI76_RS27540 at 5717.620 kb on + strand, within BWI76_RS27540 at 5717.652 kb on + strand, within BWI76_RS27540 at 5717.908 kb on + strand at 5717.956 kb on + strand at 5717.964 kb on + strand at 5717.972 kb on - strand at 5717.974 kb on + strand at 5718.007 kb on + strand at 5718.015 kb on - strand at 5718.044 kb on + strand at 5718.096 kb on - strand at 5718.096 kb on - strand at 5718.469 kb on - strand, within BWI76_RS27545 at 5718.508 kb on - strand, within BWI76_RS27545 at 5718.561 kb on + strand, within BWI76_RS27545 at 5718.571 kb on - strand, within BWI76_RS27545 at 5718.774 kb on + strand, within BWI76_RS27545 at 5718.775 kb on + strand, within BWI76_RS27545
Per-strain Table
Position Strand Gene LocusTag Fraction L-Threonine (N) remove 5,715,555 + BWI76_RS27535 0.44 +2.2 5,715,555 + BWI76_RS27535 0.44 +0.5 5,715,561 - BWI76_RS27535 0.45 +2.6 5,715,673 - BWI76_RS27535 0.52 -1.1 5,715,678 - BWI76_RS27535 0.52 +0.1 5,715,715 + BWI76_RS27535 0.55 -0.6 5,715,736 - BWI76_RS27535 0.56 -1.5 5,715,824 + BWI76_RS27535 0.62 +1.7 5,715,824 + BWI76_RS27535 0.62 +0.4 5,715,832 - BWI76_RS27535 0.62 -1.8 5,715,839 + BWI76_RS27535 0.63 -0.3 5,715,858 + BWI76_RS27535 0.64 +0.3 5,715,893 - BWI76_RS27535 0.66 -0.1 5,715,905 + BWI76_RS27535 0.67 -0.5 5,715,938 + BWI76_RS27535 0.69 +0.3 5,715,951 + BWI76_RS27535 0.70 +0.0 5,715,951 - BWI76_RS27535 0.70 +1.2 5,715,962 + BWI76_RS27535 0.70 +0.8 5,715,962 + BWI76_RS27535 0.70 +0.9 5,715,970 - BWI76_RS27535 0.71 -0.7 5,715,970 - BWI76_RS27535 0.71 -1.3 5,715,970 - BWI76_RS27535 0.71 -0.2 5,715,970 - BWI76_RS27535 0.71 -1.5 5,716,028 + BWI76_RS27535 0.75 -0.2 5,716,030 - BWI76_RS27535 0.75 +1.4 5,716,036 - BWI76_RS27535 0.75 -0.6 5,716,053 + BWI76_RS27535 0.76 +1.1 5,716,061 - BWI76_RS27535 0.77 +0.4 5,716,062 + BWI76_RS27535 0.77 -2.0 5,716,064 + BWI76_RS27535 0.77 +0.1 5,716,067 + BWI76_RS27535 0.77 +0.7 5,716,069 + BWI76_RS27535 0.77 -0.7 5,716,075 - BWI76_RS27535 0.78 -0.5 5,716,076 + BWI76_RS27535 0.78 -0.3 5,716,077 - BWI76_RS27535 0.78 +1.5 5,716,077 - BWI76_RS27535 0.78 -0.0 5,716,080 + BWI76_RS27535 0.78 +0.3 5,716,082 + BWI76_RS27535 0.78 +0.3 5,716,084 - BWI76_RS27535 0.78 +0.7 5,716,140 + BWI76_RS27535 0.82 -1.6 5,716,140 + BWI76_RS27535 0.82 -0.2 5,716,140 + BWI76_RS27535 0.82 +0.2 5,716,146 - BWI76_RS27535 0.82 +0.4 5,716,148 - BWI76_RS27535 0.82 -0.5 5,716,148 - BWI76_RS27535 0.82 -0.1 5,716,148 - BWI76_RS27535 0.82 -1.4 5,716,149 - BWI76_RS27535 0.82 -0.2 5,716,212 - BWI76_RS27535 0.86 +0.9 5,716,213 - BWI76_RS27535 0.87 +0.2 5,716,218 - BWI76_RS27535 0.87 -2.0 5,716,218 - BWI76_RS27535 0.87 +0.3 5,716,225 - BWI76_RS27535 0.87 -0.9 5,716,238 - BWI76_RS27535 0.88 -0.3 5,716,248 + BWI76_RS27535 0.89 -0.6 5,716,248 + BWI76_RS27535 0.89 -0.4 5,716,248 + BWI76_RS27535 0.89 +0.2 5,716,257 - BWI76_RS27535 0.89 +0.7 5,716,257 - BWI76_RS27535 0.89 +0.1 5,716,264 - BWI76_RS27535 0.90 -2.2 5,716,268 + -0.1 5,716,271 - -0.1 5,716,280 + -0.3 5,716,351 + -0.1 5,716,351 + +0.3 5,716,359 - -0.0 5,716,373 + -2.1 5,716,375 - +0.6 5,716,376 - +0.6 5,716,378 + +0.0 5,716,381 - +0.7 5,716,381 - -3.1 5,716,383 + -1.4 5,716,383 + -0.3 5,716,383 + -0.2 5,716,386 - +0.9 5,716,389 + -0.7 5,716,391 - -1.4 5,716,391 - -2.5 5,716,392 - -1.0 5,716,396 + -1.2 5,716,396 + +0.2 5,716,396 + +0.3 5,716,396 + +0.6 5,716,400 + -0.0 5,716,404 - -0.0 5,716,404 - -0.5 5,716,404 - -0.0 5,716,404 - -0.7 5,716,404 - -0.8 5,716,448 + -1.2 5,716,454 + +0.3 5,716,478 - +0.3 5,716,495 + -0.3 5,716,508 - +0.0 5,716,508 - -1.2 5,716,512 + +1.8 5,716,525 - +0.1 5,716,538 + +0.5 5,716,550 + +0.7 5,716,558 - -0.9 5,716,558 - -0.6 5,716,591 + BWI76_RS27540 0.11 +0.4 5,716,591 + BWI76_RS27540 0.11 -1.0 5,716,591 + BWI76_RS27540 0.11 -0.2 5,716,591 + BWI76_RS27540 0.11 +0.2 5,716,591 + BWI76_RS27540 0.11 +0.7 5,716,591 + BWI76_RS27540 0.11 +0.6 5,716,591 + BWI76_RS27540 0.11 -1.2 5,716,591 + BWI76_RS27540 0.11 +1.1 5,716,591 + BWI76_RS27540 0.11 +0.2 5,716,591 + BWI76_RS27540 0.11 -0.3 5,716,591 + BWI76_RS27540 0.11 -1.0 5,716,591 + BWI76_RS27540 0.11 -0.8 5,716,591 + BWI76_RS27540 0.11 -0.5 5,716,591 + BWI76_RS27540 0.11 -2.1 5,716,591 + BWI76_RS27540 0.11 -1.1 5,716,599 - BWI76_RS27540 0.12 +0.6 5,716,599 - BWI76_RS27540 0.12 +0.5 5,716,599 - BWI76_RS27540 0.12 +2.5 5,716,599 - BWI76_RS27540 0.12 -0.1 5,716,599 - BWI76_RS27540 0.12 +0.5 5,716,599 - BWI76_RS27540 0.12 -0.6 5,716,599 - BWI76_RS27540 0.12 +0.1 5,716,599 - BWI76_RS27540 0.12 -0.9 5,716,599 - BWI76_RS27540 0.12 -0.0 5,716,599 - BWI76_RS27540 0.12 +2.2 5,716,610 + BWI76_RS27540 0.13 -0.5 5,716,610 + BWI76_RS27540 0.13 +0.7 5,716,610 + BWI76_RS27540 0.13 -0.1 5,716,613 + BWI76_RS27540 0.13 -1.6 5,716,618 - BWI76_RS27540 0.13 -0.6 5,716,621 - BWI76_RS27540 0.13 -1.8 5,716,630 - +1.5 5,716,635 + BWI76_RS27540 0.14 -0.4 5,716,643 - BWI76_RS27540 0.15 -0.3 5,716,671 + BWI76_RS27540 0.17 -0.8 5,716,671 + BWI76_RS27540 0.17 -0.0 5,716,677 - BWI76_RS27540 0.17 -0.8 5,716,679 - BWI76_RS27540 0.18 -0.6 5,716,684 + BWI76_RS27540 0.18 -2.2 5,716,689 + BWI76_RS27540 0.18 -0.2 5,716,707 + BWI76_RS27540 0.20 +0.3 5,716,735 + BWI76_RS27540 0.22 -0.7 5,716,755 + BWI76_RS27540 0.23 -0.4 5,716,763 - BWI76_RS27540 0.24 -0.6 5,716,820 - BWI76_RS27540 0.28 -0.8 5,716,916 + BWI76_RS27540 0.35 -0.9 5,716,921 + BWI76_RS27540 0.35 -0.6 5,717,043 + BWI76_RS27540 0.44 -1.7 5,717,051 - BWI76_RS27540 0.45 +0.5 5,717,088 + +2.1 5,717,096 - BWI76_RS27540 0.48 -0.2 5,717,223 + BWI76_RS27540 0.57 +0.2 5,717,315 + BWI76_RS27540 0.64 -0.0 5,717,316 + BWI76_RS27540 0.64 -0.3 5,717,405 + BWI76_RS27540 0.70 +1.8 5,717,412 + BWI76_RS27540 0.71 +0.3 5,717,420 - BWI76_RS27540 0.71 -1.2 5,717,422 + BWI76_RS27540 0.71 -0.0 5,717,472 + BWI76_RS27540 0.75 -0.4 5,717,535 - BWI76_RS27540 0.80 +0.3 5,717,574 + BWI76_RS27540 0.82 +0.8 5,717,584 + BWI76_RS27540 0.83 -0.5 5,717,592 - BWI76_RS27540 0.84 -0.4 5,717,620 + BWI76_RS27540 0.86 -0.9 5,717,652 + BWI76_RS27540 0.88 +0.3 5,717,908 + -0.6 5,717,956 + +0.6 5,717,964 + -0.7 5,717,972 - +0.2 5,717,974 + +0.9 5,718,007 + +0.3 5,718,015 - +0.3 5,718,044 + +0.5 5,718,096 - -0.2 5,718,096 - -0.4 5,718,469 - BWI76_RS27545 0.27 +1.5 5,718,508 - BWI76_RS27545 0.32 +0.1 5,718,561 + BWI76_RS27545 0.39 +0.0 5,718,571 - BWI76_RS27545 0.41 -0.2 5,718,774 + BWI76_RS27545 0.69 +0.2 5,718,775 + BWI76_RS27545 0.69 -0.2
Or see this region's nucleotide sequence