Experiment: L-Threonine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS20775 and BWI76_RS20780 are separated by 170 nucleotides BWI76_RS20780 and BWI76_RS20785 overlap by 11 nucleotides BWI76_RS20785 and BWI76_RS20790 are separated by 10 nucleotides
BWI76_RS20775: BWI76_RS20775 - ethanolamine utilization protein EutH, at 4,342,470 to 4,343,702
_RS20775
BWI76_RS20780: BWI76_RS20780 - alcohol dehydrogenase EutG, at 4,343,873 to 4,345,060
_RS20780
BWI76_RS20785: BWI76_RS20785 - ethanolamine utilization protein EutJ, at 4,345,050 to 4,345,889
_RS20785
BWI76_RS20790: BWI76_RS20790 - aldehyde dehydrogenase, at 4,345,900 to 4,347,303
_RS20790
Position (kb) 4343
4344
4345
4346 Strain fitness (log2 ratio) -2
-1
0
1
2 at 4343.138 kb on - strand, within BWI76_RS20775 at 4343.138 kb on - strand, within BWI76_RS20775 at 4343.335 kb on + strand, within BWI76_RS20775 at 4343.343 kb on - strand, within BWI76_RS20775 at 4343.551 kb on - strand, within BWI76_RS20775 at 4343.655 kb on - strand at 4343.675 kb on - strand at 4343.764 kb on + strand at 4343.826 kb on + strand at 4343.859 kb on + strand at 4344.162 kb on + strand, within BWI76_RS20780 at 4344.162 kb on + strand, within BWI76_RS20780 at 4344.170 kb on - strand, within BWI76_RS20780 at 4344.227 kb on + strand, within BWI76_RS20780 at 4344.306 kb on + strand, within BWI76_RS20780 at 4344.398 kb on + strand, within BWI76_RS20780 at 4344.467 kb on + strand, within BWI76_RS20780 at 4344.669 kb on - strand, within BWI76_RS20780 at 4344.669 kb on - strand, within BWI76_RS20780 at 4344.876 kb on - strand, within BWI76_RS20780 at 4344.993 kb on + strand at 4345.529 kb on + strand, within BWI76_RS20785 at 4345.579 kb on - strand at 4345.916 kb on + strand at 4346.010 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Threonine (N) remove 4,343,138 - BWI76_RS20775 0.54 +0.1 4,343,138 - BWI76_RS20775 0.54 +0.3 4,343,335 + BWI76_RS20775 0.70 +1.0 4,343,343 - BWI76_RS20775 0.71 +1.1 4,343,551 - BWI76_RS20775 0.88 -1.2 4,343,655 - +0.2 4,343,675 - -0.6 4,343,764 + -0.6 4,343,826 + -0.0 4,343,859 + -0.4 4,344,162 + BWI76_RS20780 0.24 +0.5 4,344,162 + BWI76_RS20780 0.24 -0.9 4,344,170 - BWI76_RS20780 0.25 -0.4 4,344,227 + BWI76_RS20780 0.30 -2.6 4,344,306 + BWI76_RS20780 0.36 +0.4 4,344,398 + BWI76_RS20780 0.44 -0.1 4,344,467 + BWI76_RS20780 0.50 -0.8 4,344,669 - BWI76_RS20780 0.67 +0.1 4,344,669 - BWI76_RS20780 0.67 +0.7 4,344,876 - BWI76_RS20780 0.84 -0.0 4,344,993 + +1.1 4,345,529 + BWI76_RS20785 0.57 +0.5 4,345,579 - +2.2 4,345,916 + +0.4 4,346,010 - +0.7
Or see this region's nucleotide sequence