Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS20770

Experiment: L-Threonine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS20765 and BWI76_RS20770 are separated by 11 nucleotidesBWI76_RS20770 and BWI76_RS20775 overlap by 4 nucleotides BWI76_RS20765: BWI76_RS20765 - ethanolamine ammonia lyase large subunit, at 4,339,697 to 4,341,058 _RS20765 BWI76_RS20770: BWI76_RS20770 - reactivating factor for ethanolamine ammonia lyase, at 4,341,070 to 4,342,473 _RS20770 BWI76_RS20775: BWI76_RS20775 - ethanolamine utilization protein EutH, at 4,342,470 to 4,343,702 _RS20775 Position (kb) 4341 4342 4343Strain fitness (log2 ratio) -2 -1 0 1at 4340.401 kb on - strand, within BWI76_RS20765at 4340.450 kb on + strand, within BWI76_RS20765at 4340.585 kb on + strand, within BWI76_RS20765at 4340.649 kb on + strand, within BWI76_RS20765at 4340.746 kb on + strand, within BWI76_RS20765at 4340.754 kb on - strand, within BWI76_RS20765at 4341.387 kb on + strand, within BWI76_RS20770at 4341.463 kb on + strand, within BWI76_RS20770at 4341.646 kb on - strand, within BWI76_RS20770at 4341.693 kb on + strand, within BWI76_RS20770at 4341.907 kb on - strand, within BWI76_RS20770at 4341.988 kb on - strand, within BWI76_RS20770at 4342.093 kb on + strand, within BWI76_RS20770at 4342.241 kb on + strand, within BWI76_RS20770at 4342.241 kb on + strand, within BWI76_RS20770at 4342.249 kb on - strand, within BWI76_RS20770at 4342.395 kb on + strandat 4342.395 kb on + strandat 4342.608 kb on - strand, within BWI76_RS20775at 4343.138 kb on - strand, within BWI76_RS20775at 4343.138 kb on - strand, within BWI76_RS20775at 4343.335 kb on + strand, within BWI76_RS20775at 4343.343 kb on - strand, within BWI76_RS20775

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Threonine (N)
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4,340,401 - BWI76_RS20765 0.52 +1.2
4,340,450 + BWI76_RS20765 0.55 +0.8
4,340,585 + BWI76_RS20765 0.65 +0.1
4,340,649 + BWI76_RS20765 0.70 -1.0
4,340,746 + BWI76_RS20765 0.77 -1.5
4,340,754 - BWI76_RS20765 0.78 -2.4
4,341,387 + BWI76_RS20770 0.23 -0.2
4,341,463 + BWI76_RS20770 0.28 +0.6
4,341,646 - BWI76_RS20770 0.41 +1.2
4,341,693 + BWI76_RS20770 0.44 +0.1
4,341,907 - BWI76_RS20770 0.60 +0.1
4,341,988 - BWI76_RS20770 0.65 +0.2
4,342,093 + BWI76_RS20770 0.73 -0.9
4,342,241 + BWI76_RS20770 0.83 +0.3
4,342,241 + BWI76_RS20770 0.83 +0.7
4,342,249 - BWI76_RS20770 0.84 +0.6
4,342,395 + -1.1
4,342,395 + +0.2
4,342,608 - BWI76_RS20775 0.11 +0.2
4,343,138 - BWI76_RS20775 0.54 +0.1
4,343,138 - BWI76_RS20775 0.54 +0.3
4,343,335 + BWI76_RS20775 0.70 +1.0
4,343,343 - BWI76_RS20775 0.71 +1.1

Or see this region's nucleotide sequence