Experiment: L-Threonine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS20755 and BWI76_RS20760 are separated by 9 nucleotides BWI76_RS20760 and BWI76_RS20765 are separated by 20 nucleotides BWI76_RS20765 and BWI76_RS20770 are separated by 11 nucleotides
BWI76_RS20755: BWI76_RS20755 - microcompartment protein EutL, at 4,338,114 to 4,338,773
_RS20755
BWI76_RS20760: BWI76_RS20760 - ethanolamine ammonia-lyase small subunit, at 4,338,783 to 4,339,676
_RS20760
BWI76_RS20765: BWI76_RS20765 - ethanolamine ammonia lyase large subunit, at 4,339,697 to 4,341,058
_RS20765
BWI76_RS20770: BWI76_RS20770 - reactivating factor for ethanolamine ammonia lyase, at 4,341,070 to 4,342,473
_RS20770
Position (kb) 4339
4340
4341
4342 Strain fitness (log2 ratio) -2
-1
0
1 at 4338.714 kb on + strand at 4339.259 kb on - strand, within BWI76_RS20760 at 4339.278 kb on - strand, within BWI76_RS20760 at 4339.440 kb on - strand, within BWI76_RS20760 at 4339.558 kb on + strand, within BWI76_RS20760 at 4339.843 kb on + strand, within BWI76_RS20765 at 4339.957 kb on + strand, within BWI76_RS20765 at 4340.401 kb on - strand, within BWI76_RS20765 at 4340.450 kb on + strand, within BWI76_RS20765 at 4340.585 kb on + strand, within BWI76_RS20765 at 4340.649 kb on + strand, within BWI76_RS20765 at 4340.746 kb on + strand, within BWI76_RS20765 at 4340.754 kb on - strand, within BWI76_RS20765 at 4341.387 kb on + strand, within BWI76_RS20770 at 4341.463 kb on + strand, within BWI76_RS20770 at 4341.646 kb on - strand, within BWI76_RS20770 at 4341.693 kb on + strand, within BWI76_RS20770 at 4341.907 kb on - strand, within BWI76_RS20770 at 4341.988 kb on - strand, within BWI76_RS20770
Per-strain Table
Position Strand Gene LocusTag Fraction L-Threonine (N) remove 4,338,714 + +0.6 4,339,259 - BWI76_RS20760 0.53 -0.2 4,339,278 - BWI76_RS20760 0.55 -0.1 4,339,440 - BWI76_RS20760 0.73 +0.1 4,339,558 + BWI76_RS20760 0.87 +0.2 4,339,843 + BWI76_RS20765 0.11 -0.0 4,339,957 + BWI76_RS20765 0.19 -1.0 4,340,401 - BWI76_RS20765 0.52 +1.2 4,340,450 + BWI76_RS20765 0.55 +0.8 4,340,585 + BWI76_RS20765 0.65 +0.1 4,340,649 + BWI76_RS20765 0.70 -1.0 4,340,746 + BWI76_RS20765 0.77 -1.5 4,340,754 - BWI76_RS20765 0.78 -2.4 4,341,387 + BWI76_RS20770 0.23 -0.2 4,341,463 + BWI76_RS20770 0.28 +0.6 4,341,646 - BWI76_RS20770 0.41 +1.2 4,341,693 + BWI76_RS20770 0.44 +0.1 4,341,907 - BWI76_RS20770 0.60 +0.1 4,341,988 - BWI76_RS20770 0.65 +0.2
Or see this region's nucleotide sequence