Experiment: L-Threonine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS11730 and BWI76_RS11735 are separated by 53 nucleotides BWI76_RS11735 and BWI76_RS11740 are separated by 12 nucleotides BWI76_RS11740 and BWI76_RS11745 are separated by 102 nucleotides
BWI76_RS11730: BWI76_RS11730 - PTS N,N'-diacetylchitobiose transporter subunit IIC, at 2,467,686 to 2,469,044
_RS11730
BWI76_RS11735: BWI76_RS11735 - PTS N,N'-diacetylchitobiose transporter subunit IIA, at 2,469,098 to 2,469,445
_RS11735
BWI76_RS11740: BWI76_RS11740 - transcriptional regulator ChbR, at 2,469,458 to 2,470,297
_RS11740
BWI76_RS11745: BWI76_RS11745 - 6-phospho-beta-glucosidase, at 2,470,400 to 2,471,746
_RS11745
Position (kb)
2469
2470 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2468.106 kb on + strand, within BWI76_RS11730 at 2468.152 kb on + strand, within BWI76_RS11730 at 2468.152 kb on + strand, within BWI76_RS11730 at 2468.160 kb on - strand, within BWI76_RS11730 at 2468.160 kb on - strand, within BWI76_RS11730 at 2468.265 kb on + strand, within BWI76_RS11730 at 2468.331 kb on - strand, within BWI76_RS11730 at 2468.366 kb on - strand, within BWI76_RS11730 at 2468.379 kb on + strand, within BWI76_RS11730 at 2468.436 kb on - strand, within BWI76_RS11730 at 2468.462 kb on - strand, within BWI76_RS11730 at 2468.636 kb on + strand, within BWI76_RS11730 at 2468.672 kb on + strand, within BWI76_RS11730 at 2468.755 kb on + strand, within BWI76_RS11730 at 2468.808 kb on + strand, within BWI76_RS11730 at 2468.816 kb on - strand, within BWI76_RS11730 at 2468.890 kb on - strand, within BWI76_RS11730 at 2468.989 kb on + strand at 2469.088 kb on - strand at 2469.128 kb on - strand at 2469.162 kb on - strand, within BWI76_RS11735 at 2469.185 kb on - strand at 2469.207 kb on - strand, within BWI76_RS11735 at 2469.370 kb on + strand, within BWI76_RS11735 at 2469.487 kb on + strand at 2469.487 kb on + strand at 2469.495 kb on - strand at 2469.549 kb on + strand, within BWI76_RS11740 at 2469.561 kb on + strand, within BWI76_RS11740 at 2469.569 kb on - strand, within BWI76_RS11740 at 2469.578 kb on - strand at 2469.578 kb on - strand, within BWI76_RS11740 at 2469.578 kb on - strand, within BWI76_RS11740 at 2469.601 kb on - strand, within BWI76_RS11740 at 2469.629 kb on - strand, within BWI76_RS11740 at 2469.629 kb on - strand, within BWI76_RS11740 at 2469.650 kb on + strand, within BWI76_RS11740 at 2469.681 kb on - strand, within BWI76_RS11740 at 2469.781 kb on + strand, within BWI76_RS11740 at 2469.781 kb on + strand, within BWI76_RS11740 at 2469.794 kb on + strand, within BWI76_RS11740 at 2469.808 kb on + strand, within BWI76_RS11740 at 2469.808 kb on + strand, within BWI76_RS11740 at 2469.808 kb on + strand, within BWI76_RS11740 at 2469.808 kb on + strand, within BWI76_RS11740 at 2469.808 kb on + strand, within BWI76_RS11740 at 2469.808 kb on + strand, within BWI76_RS11740 at 2469.808 kb on + strand, within BWI76_RS11740 at 2469.808 kb on + strand, within BWI76_RS11740 at 2469.808 kb on + strand, within BWI76_RS11740 at 2469.808 kb on + strand, within BWI76_RS11740 at 2469.816 kb on - strand, within BWI76_RS11740 at 2469.816 kb on - strand, within BWI76_RS11740 at 2469.816 kb on - strand, within BWI76_RS11740 at 2469.816 kb on - strand, within BWI76_RS11740 at 2469.816 kb on - strand, within BWI76_RS11740 at 2469.939 kb on + strand, within BWI76_RS11740 at 2469.939 kb on + strand, within BWI76_RS11740 at 2469.939 kb on + strand, within BWI76_RS11740 at 2469.939 kb on + strand, within BWI76_RS11740 at 2469.939 kb on + strand, within BWI76_RS11740 at 2469.939 kb on + strand, within BWI76_RS11740 at 2469.939 kb on + strand, within BWI76_RS11740 at 2469.939 kb on + strand, within BWI76_RS11740 at 2469.939 kb on + strand, within BWI76_RS11740 at 2469.939 kb on + strand, within BWI76_RS11740 at 2469.939 kb on + strand, within BWI76_RS11740 at 2469.939 kb on + strand, within BWI76_RS11740 at 2469.939 kb on + strand, within BWI76_RS11740 at 2469.939 kb on + strand, within BWI76_RS11740 at 2469.941 kb on + strand, within BWI76_RS11740 at 2469.947 kb on - strand at 2469.947 kb on - strand, within BWI76_RS11740 at 2469.947 kb on - strand at 2469.950 kb on - strand, within BWI76_RS11740 at 2470.066 kb on + strand, within BWI76_RS11740 at 2470.074 kb on - strand, within BWI76_RS11740 at 2470.154 kb on + strand, within BWI76_RS11740 at 2470.155 kb on + strand, within BWI76_RS11740 at 2470.166 kb on + strand, within BWI76_RS11740 at 2470.191 kb on + strand, within BWI76_RS11740 at 2470.201 kb on + strand, within BWI76_RS11740 at 2470.202 kb on + strand, within BWI76_RS11740 at 2470.202 kb on + strand, within BWI76_RS11740 at 2470.202 kb on + strand, within BWI76_RS11740 at 2470.202 kb on + strand, within BWI76_RS11740 at 2470.202 kb on + strand, within BWI76_RS11740 at 2470.202 kb on + strand, within BWI76_RS11740 at 2470.202 kb on + strand, within BWI76_RS11740 at 2470.202 kb on + strand, within BWI76_RS11740 at 2470.202 kb on + strand, within BWI76_RS11740 at 2470.202 kb on + strand, within BWI76_RS11740 at 2470.202 kb on + strand, within BWI76_RS11740 at 2470.202 kb on + strand, within BWI76_RS11740 at 2470.202 kb on + strand, within BWI76_RS11740 at 2470.202 kb on + strand, within BWI76_RS11740 at 2470.202 kb on + strand, within BWI76_RS11740 at 2470.202 kb on + strand, within BWI76_RS11740 at 2470.202 kb on + strand, within BWI76_RS11740 at 2470.202 kb on + strand, within BWI76_RS11740 at 2470.202 kb on + strand, within BWI76_RS11740 at 2470.202 kb on + strand, within BWI76_RS11740 at 2470.202 kb on + strand, within BWI76_RS11740 at 2470.202 kb on + strand, within BWI76_RS11740 at 2470.202 kb on + strand, within BWI76_RS11740 at 2470.210 kb on - strand, within BWI76_RS11740 at 2470.210 kb on - strand, within BWI76_RS11740 at 2470.210 kb on - strand, within BWI76_RS11740 at 2470.210 kb on - strand, within BWI76_RS11740 at 2470.210 kb on - strand, within BWI76_RS11740 at 2470.210 kb on - strand, within BWI76_RS11740 at 2470.212 kb on + strand, within BWI76_RS11740 at 2470.212 kb on + strand, within BWI76_RS11740 at 2470.212 kb on + strand, within BWI76_RS11740 at 2470.212 kb on + strand, within BWI76_RS11740 at 2470.212 kb on + strand, within BWI76_RS11740 at 2470.212 kb on + strand, within BWI76_RS11740 at 2470.212 kb on - strand, within BWI76_RS11740 at 2470.220 kb on - strand at 2470.251 kb on + strand at 2470.251 kb on + strand at 2470.251 kb on + strand at 2470.251 kb on + strand at 2470.258 kb on + strand at 2470.259 kb on - strand at 2470.259 kb on - strand at 2470.259 kb on - strand at 2470.259 kb on - strand at 2470.269 kb on + strand at 2470.302 kb on + strand at 2470.365 kb on - strand at 2470.371 kb on + strand at 2470.371 kb on + strand at 2470.379 kb on - strand at 2470.379 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Threonine (N) remove 2,468,106 + BWI76_RS11730 0.31 -1.2 2,468,152 + BWI76_RS11730 0.34 +1.0 2,468,152 + BWI76_RS11730 0.34 -0.2 2,468,160 - BWI76_RS11730 0.35 -0.4 2,468,160 - BWI76_RS11730 0.35 -0.2 2,468,265 + BWI76_RS11730 0.43 +0.2 2,468,331 - BWI76_RS11730 0.47 +0.9 2,468,366 - BWI76_RS11730 0.50 +0.2 2,468,379 + BWI76_RS11730 0.51 +0.6 2,468,436 - BWI76_RS11730 0.55 -0.1 2,468,462 - BWI76_RS11730 0.57 -1.0 2,468,636 + BWI76_RS11730 0.70 +0.1 2,468,672 + BWI76_RS11730 0.73 -0.3 2,468,755 + BWI76_RS11730 0.79 +0.1 2,468,808 + BWI76_RS11730 0.83 -0.0 2,468,816 - BWI76_RS11730 0.83 -2.0 2,468,890 - BWI76_RS11730 0.89 -0.5 2,468,989 + +0.5 2,469,088 - -1.3 2,469,128 - -1.4 2,469,162 - BWI76_RS11735 0.18 -1.2 2,469,185 - +1.4 2,469,207 - BWI76_RS11735 0.31 -0.0 2,469,370 + BWI76_RS11735 0.78 -1.2 2,469,487 + -0.1 2,469,487 + +0.5 2,469,495 - -0.7 2,469,549 + BWI76_RS11740 0.11 -0.3 2,469,561 + BWI76_RS11740 0.12 -0.7 2,469,569 - BWI76_RS11740 0.13 +0.6 2,469,578 - +1.2 2,469,578 - BWI76_RS11740 0.14 -0.7 2,469,578 - BWI76_RS11740 0.14 +0.1 2,469,601 - BWI76_RS11740 0.17 +0.6 2,469,629 - BWI76_RS11740 0.20 -0.7 2,469,629 - BWI76_RS11740 0.20 -0.6 2,469,650 + BWI76_RS11740 0.23 +0.6 2,469,681 - BWI76_RS11740 0.27 -1.3 2,469,781 + BWI76_RS11740 0.38 +0.3 2,469,781 + BWI76_RS11740 0.38 -1.7 2,469,794 + BWI76_RS11740 0.40 -1.1 2,469,808 + BWI76_RS11740 0.42 -0.7 2,469,808 + BWI76_RS11740 0.42 +2.2 2,469,808 + BWI76_RS11740 0.42 +0.6 2,469,808 + BWI76_RS11740 0.42 +0.3 2,469,808 + BWI76_RS11740 0.42 -0.3 2,469,808 + BWI76_RS11740 0.42 -0.1 2,469,808 + BWI76_RS11740 0.42 +1.2 2,469,808 + BWI76_RS11740 0.42 +0.7 2,469,808 + BWI76_RS11740 0.42 -0.8 2,469,808 + BWI76_RS11740 0.42 -0.8 2,469,816 - BWI76_RS11740 0.43 -0.1 2,469,816 - BWI76_RS11740 0.43 +0.9 2,469,816 - BWI76_RS11740 0.43 -0.1 2,469,816 - BWI76_RS11740 0.43 -1.6 2,469,816 - BWI76_RS11740 0.43 +0.1 2,469,939 + BWI76_RS11740 0.57 -2.3 2,469,939 + BWI76_RS11740 0.57 -1.0 2,469,939 + BWI76_RS11740 0.57 -1.5 2,469,939 + BWI76_RS11740 0.57 -1.1 2,469,939 + BWI76_RS11740 0.57 -0.3 2,469,939 + BWI76_RS11740 0.57 -0.8 2,469,939 + BWI76_RS11740 0.57 +1.4 2,469,939 + BWI76_RS11740 0.57 +0.1 2,469,939 + BWI76_RS11740 0.57 +2.6 2,469,939 + BWI76_RS11740 0.57 -0.4 2,469,939 + BWI76_RS11740 0.57 +0.0 2,469,939 + BWI76_RS11740 0.57 -0.0 2,469,939 + BWI76_RS11740 0.57 -1.3 2,469,939 + BWI76_RS11740 0.57 -0.6 2,469,941 + BWI76_RS11740 0.57 +1.2 2,469,947 - +0.6 2,469,947 - BWI76_RS11740 0.58 -0.8 2,469,947 - -0.1 2,469,950 - BWI76_RS11740 0.59 -1.0 2,470,066 + BWI76_RS11740 0.72 -1.4 2,470,074 - BWI76_RS11740 0.73 +1.4 2,470,154 + BWI76_RS11740 0.83 +0.2 2,470,155 + BWI76_RS11740 0.83 +0.2 2,470,166 + BWI76_RS11740 0.84 -0.9 2,470,191 + BWI76_RS11740 0.87 +0.2 2,470,201 + BWI76_RS11740 0.88 +1.6 2,470,202 + BWI76_RS11740 0.89 -2.8 2,470,202 + BWI76_RS11740 0.89 -1.5 2,470,202 + BWI76_RS11740 0.89 -0.5 2,470,202 + BWI76_RS11740 0.89 -1.0 2,470,202 + BWI76_RS11740 0.89 -0.1 2,470,202 + BWI76_RS11740 0.89 +0.9 2,470,202 + BWI76_RS11740 0.89 -0.3 2,470,202 + BWI76_RS11740 0.89 +0.1 2,470,202 + BWI76_RS11740 0.89 -0.7 2,470,202 + BWI76_RS11740 0.89 -0.4 2,470,202 + BWI76_RS11740 0.89 -0.9 2,470,202 + BWI76_RS11740 0.89 -0.0 2,470,202 + BWI76_RS11740 0.89 +0.4 2,470,202 + BWI76_RS11740 0.89 -1.6 2,470,202 + BWI76_RS11740 0.89 +0.0 2,470,202 + BWI76_RS11740 0.89 -0.6 2,470,202 + BWI76_RS11740 0.89 -0.1 2,470,202 + BWI76_RS11740 0.89 -0.7 2,470,202 + BWI76_RS11740 0.89 +1.3 2,470,202 + BWI76_RS11740 0.89 -0.5 2,470,202 + BWI76_RS11740 0.89 +1.9 2,470,202 + BWI76_RS11740 0.89 -0.3 2,470,202 + BWI76_RS11740 0.89 +1.2 2,470,210 - BWI76_RS11740 0.90 -0.2 2,470,210 - BWI76_RS11740 0.90 -0.1 2,470,210 - BWI76_RS11740 0.90 -1.5 2,470,210 - BWI76_RS11740 0.90 -1.1 2,470,210 - BWI76_RS11740 0.90 +1.6 2,470,210 - BWI76_RS11740 0.90 +1.0 2,470,212 + BWI76_RS11740 0.90 -0.3 2,470,212 + BWI76_RS11740 0.90 +1.2 2,470,212 + BWI76_RS11740 0.90 +1.3 2,470,212 + BWI76_RS11740 0.90 -0.6 2,470,212 + BWI76_RS11740 0.90 -2.0 2,470,212 + BWI76_RS11740 0.90 +0.6 2,470,212 - BWI76_RS11740 0.90 +1.6 2,470,220 - -0.1 2,470,251 + +0.2 2,470,251 + +0.9 2,470,251 + -0.4 2,470,251 + +0.1 2,470,258 + +0.4 2,470,259 - +0.1 2,470,259 - +0.0 2,470,259 - +0.0 2,470,259 - -1.0 2,470,269 + -0.6 2,470,302 + +0.7 2,470,365 - +0.0 2,470,371 + -0.6 2,470,371 + +0.8 2,470,379 - -0.5 2,470,379 - -0.1
Or see this region's nucleotide sequence