Experiment: L-Threonine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS07940 and BWI76_RS07945 are separated by 241 nucleotides BWI76_RS07945 and BWI76_RS07950 are separated by 77 nucleotides BWI76_RS07950 and BWI76_RS07955 are separated by 199 nucleotides
BWI76_RS07940: BWI76_RS07940 - alkyl hydroperoxide reductase subunit C, at 1,687,175 to 1,687,738
_RS07940
BWI76_RS07945: BWI76_RS07945 - alkyl hydroperoxide reductase subunit F, at 1,687,980 to 1,689,545
_RS07945
BWI76_RS07950: BWI76_RS07950 - universal stress protein G, at 1,689,623 to 1,690,051
_RS07950
BWI76_RS07955: BWI76_RS07955 - nucleoside diphosphate kinase regulator, at 1,690,251 to 1,690,661
_RS07955
Position (kb)
1687
1688
1689
1690 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1687.058 kb on + strand at 1687.110 kb on + strand at 1687.118 kb on - strand at 1687.118 kb on - strand at 1687.140 kb on + strand at 1687.148 kb on - strand at 1687.169 kb on + strand at 1687.177 kb on - strand at 1687.177 kb on - strand at 1687.267 kb on - strand, within BWI76_RS07940 at 1687.352 kb on + strand, within BWI76_RS07940 at 1687.373 kb on + strand, within BWI76_RS07940 at 1687.380 kb on + strand, within BWI76_RS07940 at 1687.560 kb on + strand, within BWI76_RS07940 at 1687.568 kb on - strand, within BWI76_RS07940 at 1687.608 kb on + strand, within BWI76_RS07940 at 1687.645 kb on - strand, within BWI76_RS07940 at 1687.713 kb on + strand at 1687.816 kb on - strand at 1687.930 kb on + strand at 1688.269 kb on - strand, within BWI76_RS07945 at 1688.364 kb on + strand, within BWI76_RS07945 at 1688.372 kb on - strand, within BWI76_RS07945 at 1688.671 kb on - strand, within BWI76_RS07945 at 1688.732 kb on - strand, within BWI76_RS07945 at 1688.856 kb on - strand, within BWI76_RS07945 at 1689.177 kb on - strand, within BWI76_RS07945 at 1689.205 kb on + strand, within BWI76_RS07945 at 1689.555 kb on + strand at 1689.576 kb on + strand at 1689.576 kb on + strand at 1689.584 kb on - strand at 1689.596 kb on - strand at 1689.596 kb on - strand at 1689.667 kb on - strand, within BWI76_RS07950 at 1689.791 kb on - strand, within BWI76_RS07950 at 1689.882 kb on - strand, within BWI76_RS07950 at 1689.882 kb on - strand, within BWI76_RS07950 at 1689.937 kb on - strand, within BWI76_RS07950 at 1690.194 kb on - strand at 1690.363 kb on - strand, within BWI76_RS07955 at 1690.482 kb on + strand, within BWI76_RS07955
Per-strain Table
Position Strand Gene LocusTag Fraction L-Threonine (N) remove 1,687,058 + -0.4 1,687,110 + +0.3 1,687,118 - +0.5 1,687,118 - +0.1 1,687,140 + +0.0 1,687,148 - -0.5 1,687,169 + +1.9 1,687,177 - -1.2 1,687,177 - -1.0 1,687,267 - BWI76_RS07940 0.16 +0.7 1,687,352 + BWI76_RS07940 0.31 -0.9 1,687,373 + BWI76_RS07940 0.35 -1.3 1,687,380 + BWI76_RS07940 0.36 +0.1 1,687,560 + BWI76_RS07940 0.68 +0.7 1,687,568 - BWI76_RS07940 0.70 +0.2 1,687,608 + BWI76_RS07940 0.77 -0.9 1,687,645 - BWI76_RS07940 0.83 -0.8 1,687,713 + +0.9 1,687,816 - +1.5 1,687,930 + +0.1 1,688,269 - BWI76_RS07945 0.18 -0.5 1,688,364 + BWI76_RS07945 0.25 -0.2 1,688,372 - BWI76_RS07945 0.25 +0.3 1,688,671 - BWI76_RS07945 0.44 -0.3 1,688,732 - BWI76_RS07945 0.48 -1.2 1,688,856 - BWI76_RS07945 0.56 -1.4 1,689,177 - BWI76_RS07945 0.76 +1.3 1,689,205 + BWI76_RS07945 0.78 -1.0 1,689,555 + -0.6 1,689,576 + +0.8 1,689,576 + +0.7 1,689,584 - -0.1 1,689,596 - -0.0 1,689,596 - -2.1 1,689,667 - BWI76_RS07950 0.10 +1.0 1,689,791 - BWI76_RS07950 0.39 +0.1 1,689,882 - BWI76_RS07950 0.60 +0.6 1,689,882 - BWI76_RS07950 0.60 -0.4 1,689,937 - BWI76_RS07950 0.73 -0.1 1,690,194 - -0.3 1,690,363 - BWI76_RS07955 0.27 +1.8 1,690,482 + BWI76_RS07955 0.56 +0.1
Or see this region's nucleotide sequence