Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt
AZOBR_RS27685: AZOBR_RS27685 - hypothetical protein, at 374,536 to 374,820
_RS27685
Position (kb) 374
375 Strain fitness (log2 ratio) -2
-1
0
1
2 at 373.547 kb on + strand at 373.547 kb on + strand at 373.548 kb on - strand at 373.548 kb on - strand at 373.548 kb on - strand at 373.548 kb on - strand at 373.637 kb on + strand at 373.637 kb on + strand at 373.637 kb on + strand at 373.637 kb on + strand at 373.637 kb on + strand at 373.638 kb on - strand at 373.911 kb on - strand at 373.911 kb on - strand at 373.911 kb on - strand at 374.278 kb on - strand at 374.278 kb on - strand at 374.528 kb on + strand at 374.529 kb on - strand at 374.529 kb on - strand at 374.581 kb on + strand, within AZOBR_RS27685 at 374.581 kb on + strand, within AZOBR_RS27685 at 374.612 kb on + strand, within AZOBR_RS27685 at 374.612 kb on + strand, within AZOBR_RS27685 at 374.612 kb on + strand, within AZOBR_RS27685 at 374.612 kb on + strand, within AZOBR_RS27685 at 374.639 kb on + strand, within AZOBR_RS27685 at 374.640 kb on - strand, within AZOBR_RS27685 at 374.640 kb on - strand, within AZOBR_RS27685 at 374.640 kb on - strand, within AZOBR_RS27685 at 374.640 kb on - strand, within AZOBR_RS27685 at 374.708 kb on + strand, within AZOBR_RS27685 at 374.708 kb on + strand, within AZOBR_RS27685 at 374.708 kb on + strand, within AZOBR_RS27685 at 374.708 kb on + strand, within AZOBR_RS27685 at 374.708 kb on + strand, within AZOBR_RS27685 at 374.709 kb on - strand, within AZOBR_RS27685 at 374.709 kb on - strand, within AZOBR_RS27685 at 374.709 kb on - strand, within AZOBR_RS27685 at 374.709 kb on - strand, within AZOBR_RS27685 at 374.709 kb on - strand, within AZOBR_RS27685 at 374.720 kb on + strand, within AZOBR_RS27685 at 374.720 kb on + strand, within AZOBR_RS27685 at 375.341 kb on + strand at 375.341 kb on + strand at 375.341 kb on + strand at 375.342 kb on - strand at 375.342 kb on - strand at 375.342 kb on - strand at 375.342 kb on - strand at 375.342 kb on - strand at 375.342 kb on - strand at 375.342 kb on - strand at 375.606 kb on - strand at 375.680 kb on + strand at 375.680 kb on + strand at 375.681 kb on - strand at 375.681 kb on - strand at 375.681 kb on - strand at 375.689 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB remove 373,547 + +1.0 373,547 + -1.1 373,548 - -0.1 373,548 - +0.3 373,548 - +0.1 373,548 - +1.1 373,637 + +1.3 373,637 + +1.4 373,637 + +1.3 373,637 + -0.3 373,637 + -0.7 373,638 - -1.7 373,911 - -1.4 373,911 - -0.8 373,911 - +0.4 374,278 - -0.1 374,278 - -0.3 374,528 + +0.1 374,529 - -1.3 374,529 - -1.0 374,581 + AZOBR_RS27685 0.16 +0.1 374,581 + AZOBR_RS27685 0.16 +0.5 374,612 + AZOBR_RS27685 0.27 -0.3 374,612 + AZOBR_RS27685 0.27 +0.0 374,612 + AZOBR_RS27685 0.27 +0.8 374,612 + AZOBR_RS27685 0.27 +1.0 374,639 + AZOBR_RS27685 0.36 +1.3 374,640 - AZOBR_RS27685 0.36 +0.3 374,640 - AZOBR_RS27685 0.36 -1.8 374,640 - AZOBR_RS27685 0.36 +1.3 374,640 - AZOBR_RS27685 0.36 +1.7 374,708 + AZOBR_RS27685 0.60 +0.2 374,708 + AZOBR_RS27685 0.60 -0.4 374,708 + AZOBR_RS27685 0.60 +1.6 374,708 + AZOBR_RS27685 0.60 +0.5 374,708 + AZOBR_RS27685 0.60 +0.1 374,709 - AZOBR_RS27685 0.61 -2.7 374,709 - AZOBR_RS27685 0.61 -0.7 374,709 - AZOBR_RS27685 0.61 -0.1 374,709 - AZOBR_RS27685 0.61 +1.1 374,709 - AZOBR_RS27685 0.61 -1.6 374,720 + AZOBR_RS27685 0.65 -1.3 374,720 + AZOBR_RS27685 0.65 +0.4 375,341 + +1.1 375,341 + +2.3 375,341 + -0.4 375,342 - -1.5 375,342 - -1.6 375,342 - -0.7 375,342 - +0.3 375,342 - -1.1 375,342 - +0.5 375,342 - -1.7 375,606 - +0.3 375,680 + -0.3 375,680 + +1.3 375,681 - -0.1 375,681 - -0.1 375,681 - -1.5 375,689 + -0.4
Or see this region's nucleotide sequence