Experiment: 1 day starvation, 37C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0246 and DvMF_0247 are separated by 66 nucleotides DvMF_0247 and DvMF_0248 are separated by 9 nucleotides DvMF_0248 and DvMF_0249 are separated by 533 nucleotides
DvMF_0246: DvMF_0246 - protein of unknown function DUF1078 domain protein (RefSeq), at 278,706 to 280,343
_0246
DvMF_0247: DvMF_0247 - flagellar hook capping protein (RefSeq), at 280,410 to 281,201
_0247
DvMF_0248: DvMF_0248 - flagellar hook-length control protein (RefSeq), at 281,211 to 283,106
_0248
DvMF_0249: DvMF_0249 - glycosyl transferase family 9 (RefSeq), at 283,640 to 285,205
_0249
Position (kb) 281
282
283
284 Strain fitness (log2 ratio) -1
0
1 at 280.246 kb on + strand at 280.246 kb on + strand at 280.246 kb on + strand at 280.630 kb on + strand, within DvMF_0247 at 280.827 kb on + strand, within DvMF_0247 at 281.223 kb on + strand at 281.456 kb on + strand, within DvMF_0248 at 281.464 kb on - strand, within DvMF_0248 at 281.701 kb on - strand, within DvMF_0248 at 281.953 kb on + strand, within DvMF_0248 at 281.958 kb on + strand, within DvMF_0248 at 281.961 kb on - strand, within DvMF_0248 at 282.384 kb on + strand, within DvMF_0248 at 282.563 kb on - strand, within DvMF_0248 at 283.048 kb on - strand at 283.116 kb on + strand at 283.291 kb on - strand at 283.365 kb on + strand at 283.479 kb on - strand at 283.609 kb on - strand at 283.626 kb on - strand at 283.681 kb on - strand at 283.758 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 1 day starvation, 37C remove 280,246 + -1.6 280,246 + -0.7 280,246 + -0.4 280,630 + DvMF_0247 0.28 -0.2 280,827 + DvMF_0247 0.53 -0.4 281,223 + -0.4 281,456 + DvMF_0248 0.13 -1.1 281,464 - DvMF_0248 0.13 -0.6 281,701 - DvMF_0248 0.26 -1.0 281,953 + DvMF_0248 0.39 -0.6 281,958 + DvMF_0248 0.39 +0.2 281,961 - DvMF_0248 0.40 -0.5 282,384 + DvMF_0248 0.62 -0.8 282,563 - DvMF_0248 0.71 -0.8 283,048 - -0.1 283,116 + -0.4 283,291 - +0.1 283,365 + +0.2 283,479 - -0.5 283,609 - +1.2 283,626 - +1.5 283,681 - -0.6 283,758 + -0.7
Or see this region's nucleotide sequence