Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_65p00080
Experiment: m.b. Fusidic 0.0002 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Fusidic 0.0002 mg/ml |
---|---|---|---|---|---|
remove | |||||
10,345 | + | +0.8 | |||
10,461 | - | +0.0 | |||
10,612 | - | PGA1_65p00070 | 0.24 | +1.4 | |
10,613 | - | PGA1_65p00070 | 0.24 | +0.2 | |
10,614 | + | PGA1_65p00070 | 0.25 | +1.1 | |
10,691 | + | PGA1_65p00070 | 0.34 | +1.0 | |
11,219 | - | +0.0 | |||
11,234 | - | -1.1 | |||
11,241 | + | +0.9 | |||
11,442 | - | -0.7 | |||
11,749 | - | PGA1_65p00080 | 0.33 | +0.1 | |
11,785 | - | PGA1_65p00080 | 0.36 | -1.7 | |
11,802 | + | PGA1_65p00080 | 0.38 | -0.1 | |
11,869 | - | PGA1_65p00080 | 0.43 | -1.9 | |
12,021 | + | PGA1_65p00080 | 0.55 | -1.7 | |
12,053 | + | PGA1_65p00080 | 0.58 | -0.3 | |
12,083 | - | PGA1_65p00080 | 0.60 | -1.0 | |
12,139 | - | PGA1_65p00080 | 0.65 | -0.8 | |
12,155 | + | PGA1_65p00080 | 0.66 | -0.6 | |
12,251 | + | PGA1_65p00080 | 0.74 | -0.3 | |
12,646 | - | +0.4 | |||
12,814 | + | +0.2 | |||
12,912 | - | +1.2 | |||
13,044 | + | PGA1_65p00090 | 0.10 | -2.4 | |
13,052 | + | PGA1_65p00090 | 0.10 | +0.4 | |
13,074 | + | PGA1_65p00090 | 0.12 | +0.4 | |
13,088 | - | PGA1_65p00090 | 0.12 | -1.1 | |
13,088 | - | PGA1_65p00090 | 0.12 | -1.0 | |
13,372 | + | PGA1_65p00090 | 0.26 | -0.1 | |
13,372 | + | PGA1_65p00090 | 0.26 | +0.4 | |
13,390 | - | PGA1_65p00090 | 0.27 | -0.3 | |
13,441 | + | PGA1_65p00090 | 0.30 | -0.9 |
Or see this region's nucleotide sequence