Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c31710

Experiment: m.b. Fusidic 0.0002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Fusidic 0.0002 mg/ml
3,311,194	+				+0.4
3,311,202	-				+0.4
3,311,240	+				-0.1
3,311,240	+				+1.0
3,311,240	+				+0.6
3,311,240	+				+0.3
3,311,248	-		PGA1_c31700	0.10	-1.3
3,311,248	-		PGA1_c31700	0.10	+0.9
3,311,248	-		PGA1_c31700	0.10	-1.9
3,311,250	+		PGA1_c31700	0.10	+1.4
3,311,250	+		PGA1_c31700	0.10	-0.9
3,311,258	-		PGA1_c31700	0.11	+1.3
3,311,276	+		PGA1_c31700	0.13	-0.2
3,311,297	+		PGA1_c31700	0.15	+1.0
3,311,485	+		PGA1_c31700	0.36	+0.1
3,311,554	+		PGA1_c31700	0.43	+0.1
3,311,559	+		PGA1_c31700	0.44	-0.6
3,311,559	+		PGA1_c31700	0.44	-0.2
3,311,564	+		PGA1_c31700	0.44	+1.5
3,311,572	-		PGA1_c31700	0.45	-0.1
3,311,572	-		PGA1_c31700	0.45	-0.7
3,311,615	+		PGA1_c31700	0.50	+1.1
3,311,662	+		PGA1_c31700	0.55	-0.0
3,311,662	-		PGA1_c31700	0.55	+0.7
3,311,669	+		PGA1_c31700	0.56	+0.4
3,311,684	+		PGA1_c31700	0.57	+1.6
3,311,684	+		PGA1_c31700	0.57	+1.1
3,311,687	-		PGA1_c31700	0.58	+0.2
3,311,692	-		PGA1_c31700	0.58	+0.3
3,311,692	-		PGA1_c31700	0.58	-0.4
3,311,692	-		PGA1_c31700	0.58	-0.1
3,311,697	-		PGA1_c31700	0.59	-0.6
3,311,698	-		PGA1_c31700	0.59	+0.2
3,311,722	+		PGA1_c31700	0.62	-1.5
3,311,730	-		PGA1_c31700	0.62	+0.5
3,311,805	+		PGA1_c31700	0.71	+0.5
3,311,805	+		PGA1_c31700	0.71	+0.4
3,311,815	+		PGA1_c31700	0.72	-0.1
3,311,951	+		PGA1_c31700	0.86	-0.4
3,311,952	-		PGA1_c31700	0.87	-1.0
3,311,959	-		PGA1_c31700	0.87	+1.7
3,311,959	-		PGA1_c31700	0.87	-0.2
3,311,959	-		PGA1_c31700	0.87	-1.2
3,311,985	+				+0.3
3,312,014	-				+0.0
3,312,048	-				+0.7
3,312,214	-				-1.6
3,312,240	+				-0.4
3,312,242	+				-0.9
3,312,293	-				-0.8
3,312,421	+		PGA1_c31710	0.11	+0.5
3,312,471	+		PGA1_c31710	0.13	-1.7
3,312,481	+		PGA1_c31710	0.13	-0.4
3,312,481	+		PGA1_c31710	0.13	-1.1
3,312,489	-		PGA1_c31710	0.13	-0.2
3,312,489	-		PGA1_c31710	0.13	-1.8
3,312,489	-		PGA1_c31710	0.13	-0.3
3,312,489	-		PGA1_c31710	0.13	-1.7
3,312,489	-		PGA1_c31710	0.13	-0.4
3,312,489	-		PGA1_c31710	0.13	-1.6
3,312,503	+		PGA1_c31710	0.14	-2.6
3,312,511	-		PGA1_c31710	0.14	+0.3
3,312,544	+		PGA1_c31710	0.15	-3.7
3,312,544	+		PGA1_c31710	0.15	-0.0
3,312,552	+		PGA1_c31710	0.15	-0.5
3,312,552	-		PGA1_c31710	0.15	-1.3
3,312,552	-		PGA1_c31710	0.15	-1.6
3,312,552	-		PGA1_c31710	0.15	+0.1
3,312,552	-		PGA1_c31710	0.15	+0.7
3,312,601	+		PGA1_c31710	0.17	+0.3
3,312,605	-		PGA1_c31710	0.17	-1.0
3,312,606	+		PGA1_c31710	0.17	-1.5
3,312,609	-		PGA1_c31710	0.17	+1.3
3,312,611	+		PGA1_c31710	0.17	-0.9
3,312,616	+		PGA1_c31710	0.17	-0.6
3,312,616	+		PGA1_c31710	0.17	-0.6
3,312,623	-		PGA1_c31710	0.17	-1.6
3,312,680	-		PGA1_c31710	0.19	-1.0
3,312,726	+		PGA1_c31710	0.21	-0.5
3,312,734	-		PGA1_c31710	0.21	-2.2
3,312,734	-		PGA1_c31710	0.21	-2.0
3,312,734	-		PGA1_c31710	0.21	-0.6
3,312,756	-		PGA1_c31710	0.21	+0.9
3,312,827	+		PGA1_c31710	0.24	-0.8
3,312,827	+		PGA1_c31710	0.24	-1.1
3,312,827	+		PGA1_c31710	0.24	-2.7
3,312,827	+		PGA1_c31710	0.24	-1.7
3,312,835	-		PGA1_c31710	0.24	-0.4
3,312,835	-		PGA1_c31710	0.24	-1.0
3,312,835	-		PGA1_c31710	0.24	-0.5
3,312,835	-		PGA1_c31710	0.24	-2.0
3,312,963	+		PGA1_c31710	0.28	-0.9
3,312,991	+		PGA1_c31710	0.29	-0.7
3,313,134	-		PGA1_c31710	0.33	-1.1
3,313,134	-		PGA1_c31710	0.33	-2.3
3,313,134	-		PGA1_c31710	0.33	-1.9
3,313,149	+		PGA1_c31710	0.34	-1.3
3,313,188	-		PGA1_c31710	0.35	-0.9
3,313,225	+		PGA1_c31710	0.36	-2.0
3,313,233	-		PGA1_c31710	0.36	-1.3
3,313,233	-		PGA1_c31710	0.36	-1.8
3,313,263	+		PGA1_c31710	0.37	-1.4
3,313,284	+		PGA1_c31710	0.38	-0.7
3,313,285	+		PGA1_c31710	0.38	-1.2
3,313,354	+		PGA1_c31710	0.40	-2.1
3,313,354	+		PGA1_c31710	0.40	-0.2
3,313,362	-		PGA1_c31710	0.40	+0.1
3,313,368	-		PGA1_c31710	0.40	-1.0
3,313,395	-		PGA1_c31710	0.41	-0.4
3,313,407	+		PGA1_c31710	0.42	-2.0
3,313,438	+		PGA1_c31710	0.43	-0.6
3,313,508	-		PGA1_c31710	0.45	-0.1
3,313,538	+		PGA1_c31710	0.46	-2.7
3,313,585	-		PGA1_c31710	0.47	+0.1
3,313,684	+		PGA1_c31710	0.50	-0.4
3,313,695	+		PGA1_c31710	0.51	-1.4
3,313,722	+		PGA1_c31710	0.51	-0.9
3,313,805	+		PGA1_c31710	0.54	-1.3
3,313,958	+		PGA1_c31710	0.59	-1.6
3,313,965	-		PGA1_c31710	0.59	+0.7
3,314,048	+		PGA1_c31710	0.62	-0.9
3,314,088	+		PGA1_c31710	0.63	-1.8
3,314,096	+		PGA1_c31710	0.63	+0.4
3,314,151	-		PGA1_c31710	0.65	-1.9
3,314,192	-		PGA1_c31710	0.66	-0.6
3,314,236	+		PGA1_c31710	0.67	+0.7
3,314,244	-		PGA1_c31710	0.68	-1.7
3,314,246	+		PGA1_c31710	0.68	+0.2
3,314,253	+		PGA1_c31710	0.68	-1.0
3,314,312	-		PGA1_c31710	0.70	-1.3
3,314,374	-		PGA1_c31710	0.72	-0.4
3,314,379	-		PGA1_c31710	0.72	+0.5
3,314,483	+		PGA1_c31710	0.75	-1.1
3,314,491	-		PGA1_c31710	0.75	-1.0
3,314,582	+		PGA1_c31710	0.78	-1.5
3,314,615	-		PGA1_c31710	0.79	-0.1
3,314,659	-		PGA1_c31710	0.81	+0.1
3,314,668	+		PGA1_c31710	0.81	-0.4
3,314,673	+		PGA1_c31710	0.81	-0.2
3,314,681	-		PGA1_c31710	0.81	+0.0
3,314,816	-		PGA1_c31710	0.85	-0.5
3,314,825	-		PGA1_c31710	0.86	+0.4
3,314,825	-		PGA1_c31710	0.86	-1.0
3,314,905	-		PGA1_c31710	0.88	-1.8
3,314,921	+		PGA1_c31710	0.89	-1.9
3,314,936	-		PGA1_c31710	0.89	-0.5
3,314,957	+		PGA1_c31710	0.90	-0.0
3,314,957	+		PGA1_c31710	0.90	+0.2
3,314,965	-				-0.9
3,314,985	-				-0.7
3,314,985	-				-1.1
3,315,038	-				-0.7
3,315,104	-				-0.5
3,315,104	-				-1.4
3,315,131	+				+0.7
3,315,138	+				-2.3
3,315,161	+				+0.7
3,315,170	-				-0.9
3,315,195	+				-0.4
3,315,202	-				+0.7
3,315,288	+				+0.3
3,315,288	+				-0.6
3,315,297	-				+0.1
3,315,297	-				+0.4
3,315,306	-				+2.0
3,315,336	+				+0.5
3,315,336	+				+0.4
3,315,336	+				+1.0
3,315,336	+				+0.1
3,315,344	-				-1.8
3,315,344	-				-0.6
3,315,344	-				-0.3
3,315,344	-				-0.8
3,315,346	+				+0.1
3,315,353	-				+0.8
3,315,353	-				+0.9
3,315,390	-				-1.4
3,315,399	-				-0.4
3,315,456	-				+0.3
3,315,506	+				+0.4
3,315,514	-				-0.4
3,315,514	-				+0.5
3,315,527	+				+3.3
3,315,537	+				-0.4
3,315,570	+				+0.7
3,315,581	+				+1.0
3,315,582	-				-2.4
3,315,594	+				-0.3
3,315,653	+		PGA1_c31720	0.11	-2.7
3,315,704	+		PGA1_c31720	0.20	+0.2
3,315,752	-		PGA1_c31720	0.28	-0.9
3,315,763	+		PGA1_c31720	0.29	-0.9
3,315,769	-		PGA1_c31720	0.30	-0.4
3,315,780	-		PGA1_c31720	0.32	-0.3
3,315,794	+		PGA1_c31720	0.35	-1.9
3,315,845	-		PGA1_c31720	0.43	-0.0
3,315,877	+		PGA1_c31720	0.48	+0.3
3,315,877	+		PGA1_c31720	0.48	-0.4
3,315,877	+		PGA1_c31720	0.48	-0.6
3,315,885	-		PGA1_c31720	0.50	+0.2
3,315,885	-		PGA1_c31720	0.50	+0.5
3,315,885	-		PGA1_c31720	0.50	-0.5
3,315,885	-		PGA1_c31720	0.50	-0.3
3,315,885	-		PGA1_c31720	0.50	+0.3
3,315,887	+		PGA1_c31720	0.50	-1.1
3,315,914	+		PGA1_c31720	0.55	+1.7
3,315,931	+		PGA1_c31720	0.57	+1.1
3,315,971	+		PGA1_c31720	0.64	+0.1
3,316,049	-		PGA1_c31720	0.77	+0.4
3,316,049	-		PGA1_c31720	0.77	-0.6
3,316,102	-		PGA1_c31720	0.86	-0.4
3,316,129	+				+0.1
3,316,145	-				-1.0
3,316,189	+				-0.1
3,316,210	+				-0.3