Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c24610

Experiment: m.b. Fusidic 0.0002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Fusidic 0.0002 mg/ml
2,565,978	+		PGA1_c24590	0.63	-1.0
2,565,979	+		PGA1_c24590	0.63	-0.7
2,566,076	-		PGA1_c24590	0.77	+0.1
2,566,112	+		PGA1_c24590	0.82	-2.2
2,566,112	+		PGA1_c24590	0.82	-1.4
2,566,112	+		PGA1_c24590	0.82	-0.5
2,566,112	+		PGA1_c24590	0.82	+0.8
2,566,114	+		PGA1_c24590	0.82	-0.1
2,566,114	+		PGA1_c24590	0.82	-0.5
2,566,120	-		PGA1_c24590	0.83	-1.8
2,566,138	+		PGA1_c24590	0.86	+0.1
2,566,138	+		PGA1_c24590	0.86	-0.4
2,566,138	+		PGA1_c24590	0.86	-0.0
2,566,138	+		PGA1_c24590	0.86	+0.2
2,566,146	-		PGA1_c24590	0.87	-0.2
2,566,146	-		PGA1_c24590	0.87	-0.4
2,566,146	-		PGA1_c24590	0.87	+0.3
2,566,148	+		PGA1_c24590	0.87	-0.2
2,566,148	+		PGA1_c24590	0.87	+0.3
2,566,148	+		PGA1_c24590	0.87	+0.9
2,566,148	+		PGA1_c24590	0.87	-1.5
2,566,148	+		PGA1_c24590	0.87	+0.2
2,566,148	+		PGA1_c24590	0.87	-0.4
2,566,148	+		PGA1_c24590	0.87	+0.2
2,566,148	+		PGA1_c24590	0.87	-0.7
2,566,148	+		PGA1_c24590	0.87	-0.3
2,566,148	+		PGA1_c24590	0.87	-0.3
2,566,148	+		PGA1_c24590	0.87	-2.7
2,566,148	+		PGA1_c24590	0.87	-1.4
2,566,148	+		PGA1_c24590	0.87	-0.0
2,566,148	+		PGA1_c24590	0.87	+0.1
2,566,148	+		PGA1_c24590	0.87	-0.2
2,566,148	+		PGA1_c24590	0.87	-1.6
2,566,148	+		PGA1_c24590	0.87	-0.2
2,566,148	+		PGA1_c24590	0.87	-1.1
2,566,148	+		PGA1_c24590	0.87	-0.2
2,566,148	+		PGA1_c24590	0.87	-0.4
2,566,148	+		PGA1_c24590	0.87	-0.3
2,566,148	+		PGA1_c24590	0.87	-2.0
2,566,148	+		PGA1_c24590	0.87	+0.2
2,566,148	+		PGA1_c24590	0.87	+0.9
2,566,148	+		PGA1_c24590	0.87	-0.1
2,566,148	+		PGA1_c24590	0.87	-0.0
2,566,148	+		PGA1_c24590	0.87	-0.7
2,566,153	+		PGA1_c24590	0.88	-0.6
2,566,153	+		PGA1_c24590	0.88	-1.0
2,566,155	+		PGA1_c24590	0.88	+0.9
2,566,155	+		PGA1_c24590	0.88	-2.0
2,566,156	-		PGA1_c24590	0.88	-0.0
2,566,156	-		PGA1_c24590	0.88	-0.5
2,566,156	-		PGA1_c24590	0.88	+1.0
2,566,156	-		PGA1_c24590	0.88	-0.9
2,566,156	-		PGA1_c24590	0.88	+0.8
2,566,156	-		PGA1_c24590	0.88	-0.1
2,566,156	-		PGA1_c24590	0.88	+1.4
2,566,156	-		PGA1_c24590	0.88	-0.4
2,566,156	-		PGA1_c24590	0.88	-0.1
2,566,156	-		PGA1_c24590	0.88	-0.7
2,566,156	-		PGA1_c24590	0.88	-0.4
2,566,156	-		PGA1_c24590	0.88	-1.4
2,566,156	-		PGA1_c24590	0.88	-0.5
2,566,156	-		PGA1_c24590	0.88	-0.6
2,566,161	-		PGA1_c24590	0.89	+0.7
2,566,165	-		PGA1_c24590	0.89	+0.1
2,566,168	+				+0.4
2,566,182	+				+0.5
2,566,182	+				-0.1
2,566,182	+				+0.6
2,566,182	+				-2.7
2,566,182	+				-0.4
2,566,182	+				+0.6
2,566,182	+				+0.6
2,566,183	+				+0.2
2,566,183	+				-0.1
2,566,188	+				-1.0
2,566,190	-				-0.2
2,566,190	-				+0.0
2,566,190	-				-0.1
2,566,190	-				+0.5
2,566,191	-				-0.8
2,566,221	+				+0.9
2,566,229	-				-0.1
2,566,298	+				+1.0
2,566,298	+				+0.1
2,566,305	+				+1.6
2,566,306	-				+1.6
2,566,306	-				+0.1
2,566,306	-				-0.2
2,566,308	+				+0.4
2,566,308	+				-1.6
2,566,316	-				+1.3
2,566,342	-				-0.4
2,566,355	+				-0.1
2,566,396	+				+1.1
2,566,404	-				-0.3
2,566,404	-				+1.1
2,566,551	-				-0.2
2,566,551	-				-0.0
2,566,621	-				+0.3
2,566,639	+				+2.2
2,566,647	-				-0.0
2,566,652	-				+0.2
2,566,665	-				+1.6
2,566,679	+				-0.4
2,566,709	+				+0.3
2,566,709	+				+0.3
2,566,709	+				+1.3
2,566,710	+				+1.2
2,566,710	+				+0.5
2,566,717	-				-0.7
2,566,717	-				+1.4
2,566,717	-				+0.4
2,566,717	-				-1.6
2,566,736	+				+1.3
2,566,833	+				+0.3
2,566,878	-				-1.3
2,567,068	+				-0.0
2,567,076	-				-1.4
2,567,080	+				-0.6
2,567,088	-				-1.0
2,567,148	-		PGA1_c24610	0.10	-0.6
2,567,148	-		PGA1_c24610	0.10	+1.0
2,567,162	+		PGA1_c24610	0.11	-1.4
2,567,177	-		PGA1_c24610	0.11	+0.0
2,567,185	+		PGA1_c24610	0.12	-0.1
2,567,193	-		PGA1_c24610	0.12	-3.4
2,567,193	-		PGA1_c24610	0.12	-0.5
2,567,197	+		PGA1_c24610	0.12	+2.2
2,567,201	+		PGA1_c24610	0.12	-1.0
2,567,283	-		PGA1_c24610	0.15	-1.5
2,567,324	+		PGA1_c24610	0.16	-1.3
2,567,326	-		PGA1_c24610	0.16	-0.4
2,567,334	+		PGA1_c24610	0.17	-1.9
2,567,346	+		PGA1_c24610	0.17	+0.8
2,567,373	+		PGA1_c24610	0.18	+0.0
2,567,374	+		PGA1_c24610	0.18	-0.4
2,567,374	+		PGA1_c24610	0.18	-1.5
2,567,380	+		PGA1_c24610	0.18	-0.4
2,567,382	-		PGA1_c24610	0.18	-1.0
2,567,407	-		PGA1_c24610	0.19	-2.2
2,567,439	+		PGA1_c24610	0.20	-0.8
2,567,447	-		PGA1_c24610	0.20	-0.2
2,567,506	-		PGA1_c24610	0.22	-0.7
2,567,630	-		PGA1_c24610	0.26	-0.5
2,567,630	-		PGA1_c24610	0.26	-1.4
2,567,739	+		PGA1_c24610	0.30	-0.4
2,567,782	+		PGA1_c24610	0.31	-0.3
2,567,820	-		PGA1_c24610	0.33	-1.6
2,567,822	+		PGA1_c24610	0.33	-1.2
2,567,870	+		PGA1_c24610	0.34	-1.1
2,567,976	+		PGA1_c24610	0.38	+0.6
2,568,005	+		PGA1_c24610	0.39	-1.0
2,568,005	+		PGA1_c24610	0.39	-2.5
2,568,011	+		PGA1_c24610	0.39	-0.4
2,568,013	-		PGA1_c24610	0.39	-0.2
2,568,013	-		PGA1_c24610	0.39	-0.1
2,568,013	-		PGA1_c24610	0.39	-1.2
2,568,013	-		PGA1_c24610	0.39	-0.9
2,568,040	+		PGA1_c24610	0.40	-0.5
2,568,154	-		PGA1_c24610	0.43	-0.3
2,568,157	+		PGA1_c24610	0.44	-1.2
2,568,159	+		PGA1_c24610	0.44	-0.3
2,568,164	+		PGA1_c24610	0.44	-0.1
2,568,164	+		PGA1_c24610	0.44	-1.0
2,568,164	+		PGA1_c24610	0.44	+0.2
2,568,164	+		PGA1_c24610	0.44	-1.6
2,568,167	-		PGA1_c24610	0.44	-3.4
2,568,172	-		PGA1_c24610	0.44	-1.7
2,568,172	-		PGA1_c24610	0.44	-0.8
2,568,172	-		PGA1_c24610	0.44	-0.5
2,568,172	-		PGA1_c24610	0.44	-0.7
2,568,172	-		PGA1_c24610	0.44	-0.1
2,568,172	-		PGA1_c24610	0.44	-1.6
2,568,172	-		PGA1_c24610	0.44	-1.7
2,568,172	-		PGA1_c24610	0.44	+0.8
2,568,184	+		PGA1_c24610	0.44	-1.6
2,568,199	+		PGA1_c24610	0.45	-2.6
2,568,260	+		PGA1_c24610	0.47	-0.6
2,568,260	+		PGA1_c24610	0.47	-1.2
2,568,260	+		PGA1_c24610	0.47	-1.9
2,568,268	-		PGA1_c24610	0.47	-0.4
2,568,299	+		PGA1_c24610	0.48	-0.3
2,568,306	-		PGA1_c24610	0.48	-1.1
2,568,331	-		PGA1_c24610	0.49	+0.4
2,568,335	+		PGA1_c24610	0.49	-1.7
2,568,402	-		PGA1_c24610	0.52	-0.5
2,568,446	+		PGA1_c24610	0.53	-0.6
2,568,462	-		PGA1_c24610	0.54	-1.4
2,568,481	+		PGA1_c24610	0.54	-2.2
2,568,565	+		PGA1_c24610	0.57	-0.4
2,568,702	-		PGA1_c24610	0.61	-1.5
2,568,926	+		PGA1_c24610	0.69	-1.2
2,568,934	+		PGA1_c24610	0.69	-0.5
2,568,934	-		PGA1_c24610	0.69	-1.0
2,568,934	-		PGA1_c24610	0.69	-2.2
2,568,983	+		PGA1_c24610	0.71	-0.2
2,569,008	+		PGA1_c24610	0.72	+0.0
2,569,035	+		PGA1_c24610	0.72	-2.3
2,569,035	+		PGA1_c24610	0.72	-1.7
2,569,037	+		PGA1_c24610	0.72	-0.3
2,569,043	-		PGA1_c24610	0.73	-0.6
2,569,054	-		PGA1_c24610	0.73	-1.7
2,569,120	+		PGA1_c24610	0.75	-0.6
2,569,204	+		PGA1_c24610	0.78	-0.1
2,569,251	-		PGA1_c24610	0.80	+0.6
2,569,257	+		PGA1_c24610	0.80	-1.4
2,569,281	+		PGA1_c24610	0.80	-1.4
2,569,294	-		PGA1_c24610	0.81	-0.0
2,569,428	+		PGA1_c24610	0.85	-1.0
2,569,428	+		PGA1_c24610	0.85	-0.4
2,569,430	-		PGA1_c24610	0.85	-0.4
2,569,502	-		PGA1_c24610	0.88	-1.7
2,569,552	-		PGA1_c24610	0.89	-0.3
2,569,557	-		PGA1_c24610	0.90	-1.0
2,569,557	-		PGA1_c24610	0.90	-1.2
2,569,558	+		PGA1_c24610	0.90	-0.0
2,569,574	+				-1.1
2,569,574	+				-0.6
2,569,574	+				-0.8
2,569,581	+				-0.5
2,569,618	+				-1.0
2,569,711	-				+0.6
2,569,729	-				-1.3
2,569,747	-				+0.9
2,569,753	-				-1.2
2,569,925	-				-0.8
2,569,941	+				-1.4
2,569,975	+				+0.3
2,569,975	+				-0.6
2,570,030	-		PGA1_c24620	0.14	-1.1
2,570,087	+		PGA1_c24620	0.19	+0.1
2,570,087	+		PGA1_c24620	0.19	-1.0
2,570,147	-		PGA1_c24620	0.25	-0.4
2,570,223	+		PGA1_c24620	0.32	-1.3
2,570,233	+		PGA1_c24620	0.33	-0.9
2,570,233	+		PGA1_c24620	0.33	-1.3
2,570,241	+		PGA1_c24620	0.34	-0.4
2,570,241	-		PGA1_c24620	0.34	-0.7
2,570,241	-		PGA1_c24620	0.34	-0.4
2,570,278	+		PGA1_c24620	0.38	-0.4
2,570,330	+		PGA1_c24620	0.43	-0.3
2,570,388	-		PGA1_c24620	0.48	-0.2
2,570,435	-		PGA1_c24620	0.53	-0.4
2,570,437	-		PGA1_c24620	0.53	-1.3
2,570,513	+		PGA1_c24620	0.60	+2.4
2,570,521	-		PGA1_c24620	0.61	-2.2
2,570,528	+		PGA1_c24620	0.61	-2.1
2,570,597	+		PGA1_c24620	0.68	+0.2
2,570,649	-		PGA1_c24620	0.73	-0.8
2,570,649	-		PGA1_c24620	0.73	+1.2
2,570,766	-		PGA1_c24620	0.84	-1.0
2,570,770	+		PGA1_c24620	0.85	-1.1
2,570,832	-				-0.5
2,570,832	-				+1.0
2,570,832	-				+0.3
2,570,844	+				-0.4