Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c23500

Experiment: m.b. Fusidic 0.0002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Fusidic 0.0002 mg/ml
2,446,101	+		PGA1_c23490	0.87	+0.3
2,446,133	+		PGA1_c23490	0.88	+0.1
2,446,144	+		PGA1_c23490	0.89	+1.0
2,446,151	-		PGA1_c23490	0.89	+0.4
2,446,162	+		PGA1_c23490	0.89	-0.5
2,446,164	+		PGA1_c23490	0.90	+0.8
2,446,170	-		PGA1_c23490	0.90	+0.0
2,446,183	-				-0.2
2,446,183	-				-0.2
2,446,209	+				+1.1
2,446,214	+				-1.6
2,446,217	-				-0.4
2,446,217	-				+0.7
2,446,217	-				-1.2
2,446,217	-				+0.6
2,446,217	-				-0.1
2,446,217	-				+2.3
2,446,217	-				-1.4
2,446,245	+				-0.7
2,446,245	-				-0.7
2,446,256	+				-0.1
2,446,266	+				-0.6
2,446,276	-				+1.0
2,446,333	+				-0.0
2,446,333	+				+0.0
2,446,448	-				-0.1
2,446,514	-				-0.2
2,446,514	-				+1.2
2,446,514	-				-1.9
2,446,522	-				+0.2
2,446,591	-				-0.4
2,446,657	+				+1.2
2,446,676	-				+0.3
2,446,683	+				+0.0
2,446,688	+				+0.6
2,446,778	+				+0.0
2,446,798	+				+0.7
2,446,798	+				+0.6
2,446,858	+				+1.2
2,446,866	-				-1.2
2,446,934	-				+0.6
2,446,969	+				-0.1
2,446,980	+				-0.8
2,446,988	-				-0.1
2,446,988	-				+0.6
2,446,988	-				+1.6
2,446,988	-				+0.2
2,446,988	-				+0.0
2,446,988	-				-0.0
2,446,988	-				-0.6
2,446,988	-				+0.6
2,447,077	+				-0.0
2,447,085	-				-0.2
2,447,136	-				-2.5
2,447,166	+				-0.2
2,447,189	-				-1.0
2,447,331	+		PGA1_c23500	0.11	-1.1
2,447,370	+		PGA1_c23500	0.13	-0.5
2,447,378	-		PGA1_c23500	0.13	-1.3
2,447,480	+		PGA1_c23500	0.18	+1.0
2,447,480	+		PGA1_c23500	0.18	-0.6
2,447,488	-		PGA1_c23500	0.18	-0.4
2,447,488	-		PGA1_c23500	0.18	-1.4
2,447,492	+		PGA1_c23500	0.18	+0.2
2,447,495	-		PGA1_c23500	0.19	-0.3
2,447,500	-		PGA1_c23500	0.19	-0.5
2,447,545	-		PGA1_c23500	0.21	-1.3
2,447,545	-		PGA1_c23500	0.21	-0.7
2,447,545	-		PGA1_c23500	0.21	-2.6
2,447,545	-		PGA1_c23500	0.21	+0.6
2,447,601	-		PGA1_c23500	0.23	-0.4
2,447,661	+		PGA1_c23500	0.26	+0.2
2,447,664	-		PGA1_c23500	0.26	-0.1
2,447,664	-		PGA1_c23500	0.26	-1.6
2,447,690	+		PGA1_c23500	0.27	-0.4
2,447,695	+		PGA1_c23500	0.27	-0.2
2,447,698	-		PGA1_c23500	0.28	-0.6
2,447,698	-		PGA1_c23500	0.28	-1.4
2,447,756	+		PGA1_c23500	0.30	+0.6
2,447,766	+		PGA1_c23500	0.31	-0.7
2,447,769	-		PGA1_c23500	0.31	-0.0
2,447,769	-		PGA1_c23500	0.31	-0.9
2,447,774	-		PGA1_c23500	0.31	-1.0
2,447,825	-		PGA1_c23500	0.33	-0.4
2,447,832	-		PGA1_c23500	0.34	+0.2
2,447,838	-		PGA1_c23500	0.34	-0.3
2,447,905	+		PGA1_c23500	0.37	-0.8
2,447,913	-		PGA1_c23500	0.37	-0.0
2,447,915	+		PGA1_c23500	0.37	-1.4
2,447,923	-		PGA1_c23500	0.38	+0.4
2,447,923	-		PGA1_c23500	0.38	+2.4
2,447,923	-		PGA1_c23500	0.38	-0.4
2,448,001	+		PGA1_c23500	0.41	-0.1
2,448,049	+		PGA1_c23500	0.43	-0.3
2,448,114	+		PGA1_c23500	0.46	-0.4
2,448,153	+		PGA1_c23500	0.48	-0.9
2,448,166	+		PGA1_c23500	0.49	-1.6
2,448,174	-		PGA1_c23500	0.49	-0.3
2,448,323	-		PGA1_c23500	0.56	-1.2
2,448,324	-		PGA1_c23500	0.56	-1.4
2,448,365	-		PGA1_c23500	0.57	-0.6
2,448,393	-		PGA1_c23500	0.59	-2.3
2,448,441	-		PGA1_c23500	0.61	-1.4
2,448,508	+		PGA1_c23500	0.64	-0.0
2,448,565	+		PGA1_c23500	0.66	-0.3
2,448,575	+		PGA1_c23500	0.67	-0.1
2,448,616	-		PGA1_c23500	0.69	-0.3
2,448,638	+		PGA1_c23500	0.70	-0.7
2,448,699	+		PGA1_c23500	0.72	+0.0
2,448,743	-		PGA1_c23500	0.74	-1.2
2,448,905	+		PGA1_c23500	0.81	+0.4
2,448,907	+		PGA1_c23500	0.82	+0.2
2,448,907	+		PGA1_c23500	0.82	-0.7
2,448,907	+		PGA1_c23500	0.82	-0.2
2,448,915	-		PGA1_c23500	0.82	-0.6
2,448,925	-		PGA1_c23500	0.82	-0.2
2,449,153	-				-0.8
2,449,153	-				-0.5
2,449,160	-				-2.0
2,449,236	+				-1.0
2,449,244	-				-0.7
2,449,244	-				-0.0
2,449,344	-				-0.4
2,449,344	-				+0.4
2,449,358	+				-0.9
2,449,358	+				+1.0
2,449,365	-				-0.8
2,449,366	-				-0.5