Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c02190

Experiment: m.b. Fusidic 0.0002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Fusidic 0.0002 mg/ml
198,817	+		PGA1_c02180	0.34	+0.5
198,834	-		PGA1_c02180	0.35	+0.6
198,834	-		PGA1_c02180	0.35	+0.5
198,908	-		PGA1_c02180	0.40	+1.7
198,909	-		PGA1_c02180	0.40	+0.4
198,916	+		PGA1_c02180	0.41	+0.9
198,953	+		PGA1_c02180	0.43	+0.9
198,953	+		PGA1_c02180	0.43	+0.4
199,034	+		PGA1_c02180	0.49	+0.2
199,034	+		PGA1_c02180	0.49	+0.2
199,042	-		PGA1_c02180	0.49	+0.1
199,058	+		PGA1_c02180	0.51	+0.3
199,108	+		PGA1_c02180	0.54	-1.1
199,123	-		PGA1_c02180	0.55	-0.4
199,158	-		PGA1_c02180	0.58	+0.3
199,191	+		PGA1_c02180	0.60	-0.5
199,192	+		PGA1_c02180	0.60	+0.7
199,199	-		PGA1_c02180	0.60	-0.5
199,240	-		PGA1_c02180	0.63	-0.3
199,266	+		PGA1_c02180	0.65	+0.7
199,299	+		PGA1_c02180	0.68	-0.3
199,365	+		PGA1_c02180	0.72	-0.7
199,374	-		PGA1_c02180	0.73	+0.1
199,385	+		PGA1_c02180	0.74	-1.7
199,443	-		PGA1_c02180	0.78	-1.1
199,444	-		PGA1_c02180	0.78	-1.1
199,444	-		PGA1_c02180	0.78	-1.3
199,477	+		PGA1_c02180	0.80	-0.4
199,505	+		PGA1_c02180	0.82	-0.9
199,508	-		PGA1_c02180	0.82	-0.7
199,508	-		PGA1_c02180	0.82	-0.6
199,518	-		PGA1_c02180	0.83	-0.4
199,521	+		PGA1_c02180	0.83	+1.4
199,544	-		PGA1_c02180	0.85	+0.5
199,550	+		PGA1_c02180	0.85	+0.0
199,626	-				+0.4
199,630	-				+0.5
199,654	+				+2.0
199,654	+				+1.0
199,662	-				+0.6
199,711	+				-0.2
199,711	+				-0.9
199,719	-				-0.3
199,719	-				-0.6
199,745	+				-2.5
200,037	-		PGA1_c02190	0.19	-0.1
200,066	+		PGA1_c02190	0.21	-1.3
200,074	-		PGA1_c02190	0.21	-0.9
200,074	-		PGA1_c02190	0.21	-0.6
200,259	+		PGA1_c02190	0.35	-1.5
200,289	-		PGA1_c02190	0.37	-0.1
200,297	-		PGA1_c02190	0.37	-1.0
200,313	+		PGA1_c02190	0.39	+0.3
200,355	+		PGA1_c02190	0.42	-1.1
200,363	-		PGA1_c02190	0.42	+1.3
200,410	-		PGA1_c02190	0.46	-1.0
200,479	-		PGA1_c02190	0.51	-0.6
200,499	+		PGA1_c02190	0.52	-1.5
200,514	+		PGA1_c02190	0.53	-0.5
200,514	+		PGA1_c02190	0.53	-0.3
200,514	+		PGA1_c02190	0.53	-1.1
200,520	+		PGA1_c02190	0.53	-1.5
200,522	-		PGA1_c02190	0.54	-1.0
200,525	+		PGA1_c02190	0.54	-0.8
200,525	+		PGA1_c02190	0.54	-1.1
200,525	+		PGA1_c02190	0.54	-0.4
200,533	-		PGA1_c02190	0.54	-1.4
200,533	-		PGA1_c02190	0.54	-0.7
200,533	-		PGA1_c02190	0.54	-1.3
200,533	-		PGA1_c02190	0.54	-0.5
200,559	+		PGA1_c02190	0.56	-0.3
200,585	+		PGA1_c02190	0.58	-0.5
200,636	+		PGA1_c02190	0.62	-1.0
200,636	+		PGA1_c02190	0.62	-1.3
200,644	-		PGA1_c02190	0.62	-1.0
200,660	-		PGA1_c02190	0.64	-0.3
200,706	-		PGA1_c02190	0.67	-0.6
200,727	+		PGA1_c02190	0.68	-1.4
200,773	-		PGA1_c02190	0.72	-0.1
200,894	-		PGA1_c02190	0.80	+0.2
201,005	-		PGA1_c02190	0.88	-1.0
201,141	+				-1.3
201,141	+				-0.2
201,160	+				+1.3
201,167	+				-0.9
201,186	-				+0.4
201,369	+				-0.4
201,372	-				-0.3
201,414	-				-1.6
201,415	-				+0.5
201,494	+				-0.1
201,502	-				-0.6
201,525	+				-0.5
201,533	-				-0.3
201,533	-				-0.4
201,543	-				+0.2
201,551	-				-0.0
201,577	-				-1.3
201,698	+				-0.6
201,698	+				-0.5
201,704	+				-2.2
201,722	-				-0.4
201,723	+				+0.3
201,908	-				+0.3
201,929	+				-0.6
201,929	+				-1.6
201,937	-				-1.1
201,937	-				+0.2
201,965	+				+0.4
201,999	-				+0.2
202,057	-				+0.7
202,083	-				-1.1