Strain Fitness in Marinobacter adhaerens HP15 around HP15_1528

Experiment: m.b. Chlorite 0.08 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_1526 and HP15_1528 are separated by 59 nucleotidesHP15_1528 and HP15_1529 are separated by 42 nucleotidesHP15_1529 and HP15_1530 are separated by 39 nucleotides HP15_1526: HP15_1526 - tryptophanyl-tRNA synthetase, at 1,608,818 to 1,609,993 _1526 HP15_1528: HP15_1528 - chromosome segregation and condensation protein ScpA, at 1,610,053 to 1,610,886 _1528 HP15_1529: HP15_1529 - transcriptional regulator, at 1,610,929 to 1,611,567 _1529 HP15_1530: HP15_1530 - RNA-binding S4 domain protein, at 1,611,607 to 1,612,590 _1530 Position (kb) 1610 1611Strain fitness (log2 ratio) -2 -1 0 1at 1610.195 kb on + strand, within HP15_1528at 1610.203 kb on - strand, within HP15_1528at 1610.532 kb on - strand, within HP15_1528at 1610.564 kb on + strand, within HP15_1528at 1610.798 kb on + strand, within HP15_1528at 1610.808 kb on + strandat 1610.946 kb on + strandat 1611.074 kb on - strand, within HP15_1529at 1611.316 kb on + strand, within HP15_1529at 1611.366 kb on - strand, within HP15_1529at 1611.643 kb on + strandat 1611.676 kb on - strandat 1611.853 kb on + strand, within HP15_1530at 1611.853 kb on + strand, within HP15_1530

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Chlorite 0.08 mM
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1,610,195 + HP15_1528 0.17 +1.7
1,610,203 - HP15_1528 0.18 +1.0
1,610,532 - HP15_1528 0.57 +0.4
1,610,564 + HP15_1528 0.61 +0.4
1,610,798 + HP15_1528 0.89 -0.1
1,610,808 + +0.7
1,610,946 + -0.2
1,611,074 - HP15_1529 0.23 -2.4
1,611,316 + HP15_1529 0.61 +0.6
1,611,366 - HP15_1529 0.68 +0.2
1,611,643 + +0.9
1,611,676 - +0.1
1,611,853 + HP15_1530 0.25 -0.3
1,611,853 + HP15_1530 0.25 -0.6

Or see this region's nucleotide sequence