Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c15490
Experiment: m.b. Fusidic 0.0002 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Fusidic 0.0002 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,611,453 | + | -1.3 | |||
1,611,461 | - | -2.0 | |||
1,611,469 | + | -0.4 | |||
1,611,471 | + | +0.3 | |||
1,611,539 | + | +0.6 | |||
1,611,546 | + | -2.4 | |||
1,611,553 | - | -0.7 | |||
1,611,576 | - | -0.1 | |||
1,611,622 | + | PGA1_c15490 | 0.14 | -0.5 | |
1,611,682 | - | PGA1_c15490 | 0.25 | -1.0 | |
1,611,687 | + | PGA1_c15490 | 0.26 | +0.0 | |
1,611,764 | - | PGA1_c15490 | 0.40 | -0.4 | |
1,611,798 | + | PGA1_c15490 | 0.46 | -0.9 | |
1,611,806 | - | PGA1_c15490 | 0.48 | -0.7 | |
1,611,814 | - | PGA1_c15490 | 0.49 | -0.7 | |
1,611,827 | + | PGA1_c15490 | 0.51 | +0.1 | |
1,611,892 | + | PGA1_c15490 | 0.64 | -0.8 | |
1,611,892 | + | PGA1_c15490 | 0.64 | -0.4 | |
1,611,900 | - | PGA1_c15490 | 0.65 | -0.8 | |
1,611,900 | - | PGA1_c15490 | 0.65 | -1.0 | |
1,611,953 | - | PGA1_c15490 | 0.75 | -1.2 | |
1,611,990 | - | PGA1_c15490 | 0.82 | +0.1 | |
1,611,995 | - | PGA1_c15490 | 0.83 | -1.3 | |
1,611,995 | - | PGA1_c15490 | 0.83 | +0.9 | |
1,612,023 | + | PGA1_c15490 | 0.88 | +0.1 | |
1,612,070 | - | -0.6 |
Or see this region's nucleotide sequence