Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3451 and Dsui_3452 are separated by 172 nucleotides Dsui_3452 and Dsui_3453 are separated by 9 nucleotides Dsui_3453 and Dsui_3454 are separated by 85 nucleotides Dsui_3454 and Dsui_3455 are separated by 76 nucleotides
Dsui_3451: Dsui_3451 - sugar phosphate permease, at 3,711,976 to 3,713,259
_3451
Dsui_3452: Dsui_3452 - cytidyltransferase-related enzyme, at 3,713,432 to 3,713,923
_3452
Dsui_3453: Dsui_3453 - cation diffusion facilitator family transporter, at 3,713,933 to 3,714,841
_3453
Dsui_3454: Dsui_3454 - phospholipid-binding protein, at 3,714,927 to 3,715,343
_3454
Dsui_3455: Dsui_3455 - HD-GYP domain-containing protein, at 3,715,420 to 3,718,395
_3455
Position (kb)
3713
3714
3715 Strain fitness (log2 ratio)
-2
-1
0
1 at 3712.941 kb on + strand at 3713.027 kb on - strand, within Dsui_3451 at 3713.027 kb on - strand, within Dsui_3451 at 3713.070 kb on - strand, within Dsui_3451 at 3713.122 kb on + strand at 3713.133 kb on + strand at 3713.135 kb on - strand at 3713.220 kb on - strand at 3713.273 kb on - strand at 3713.319 kb on - strand at 3713.347 kb on + strand at 3713.918 kb on + strand at 3713.926 kb on - strand at 3714.032 kb on - strand, within Dsui_3453 at 3714.104 kb on - strand, within Dsui_3453 at 3714.217 kb on + strand, within Dsui_3453 at 3714.477 kb on + strand, within Dsui_3453 at 3714.628 kb on + strand, within Dsui_3453 at 3714.821 kb on + strand at 3715.036 kb on + strand, within Dsui_3454 at 3715.180 kb on - strand, within Dsui_3454 at 3715.326 kb on + strand at 3715.332 kb on + strand at 3715.458 kb on + strand at 3715.492 kb on + strand at 3715.492 kb on + strand at 3715.497 kb on + strand at 3715.524 kb on + strand at 3715.524 kb on + strand at 3715.568 kb on - strand at 3715.582 kb on - strand at 3715.617 kb on - strand at 3715.654 kb on - strand at 3715.747 kb on + strand, within Dsui_3455
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 3,712,941 + +0.5 3,713,027 - Dsui_3451 0.82 -0.5 3,713,027 - Dsui_3451 0.82 -2.3 3,713,070 - Dsui_3451 0.85 -0.5 3,713,122 + -1.1 3,713,133 + -2.7 3,713,135 - -2.3 3,713,220 - -0.5 3,713,273 - -2.7 3,713,319 - -1.8 3,713,347 + -1.1 3,713,918 + +0.1 3,713,926 - -0.5 3,714,032 - Dsui_3453 0.11 -0.5 3,714,104 - Dsui_3453 0.19 -1.8 3,714,217 + Dsui_3453 0.31 -0.4 3,714,477 + Dsui_3453 0.60 -0.4 3,714,628 + Dsui_3453 0.76 -0.1 3,714,821 + +1.2 3,715,036 + Dsui_3454 0.26 +0.5 3,715,180 - Dsui_3454 0.61 +1.5 3,715,326 + +0.5 3,715,332 + +0.5 3,715,458 + +0.5 3,715,492 + -0.5 3,715,492 + -2.5 3,715,497 + +0.5 3,715,524 + +0.5 3,715,524 + -2.1 3,715,568 - +0.5 3,715,582 - -1.1 3,715,617 - -1.5 3,715,654 - -1.1 3,715,747 + Dsui_3455 0.11 -0.5
Or see this region's nucleotide sequence